Wall clock time and date at job start Sat Mar 6 2021 06:06:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35632 * 117.00120 * 2 1 4 4 C 1.40200 * 120.15200 * 179.97438 * 3 2 1 5 5 C 1.47396 * 120.19580 * 0.02562 * 4 3 2 6 6 O 1.21502 * 120.00457 * 359.71793 * 5 4 3 7 7 O 1.34751 * 119.99639 * 179.71960 * 5 4 3 8 8 C 1.45206 * 116.99894 * 179.97438 * 7 5 4 9 9 C 1.53002 * 109.47091 * 179.97438 * 8 7 5 10 10 H 1.09002 * 109.46615 * 55.00356 * 9 8 7 11 11 C 1.53001 * 109.46964 * 174.99967 * 9 8 7 12 12 C 1.52997 * 109.47049 * 180.02562 * 11 9 8 13 13 C 1.53000 * 109.47060 * 300.00176 * 12 11 9 14 14 H 1.08998 * 109.46849 * 299.99880 * 13 12 11 15 15 O 1.42903 * 109.47193 * 180.02562 * 13 12 11 16 16 C 1.52992 * 109.47355 * 59.99980 * 13 12 11 17 17 C 1.53000 * 109.47379 * 295.00286 * 9 8 7 18 18 C 1.39768 * 119.60342 * 179.72274 * 4 3 2 19 19 C 1.37763 * 119.90414 * 0.26201 * 18 4 3 20 20 C 1.38567 * 120.30928 * 359.97438 * 19 18 4 21 21 C 1.50698 * 119.80129 * 180.02562 * 20 19 18 22 22 O 1.42901 * 109.47395 * 245.00436 * 21 20 19 23 23 Si 1.86308 * 109.46801 * 5.00358 * 21 20 19 24 24 C 1.38053 * 120.40154 * 0.03145 * 20 19 18 25 25 H 1.08998 * 109.46857 * 299.99837 * 1 2 3 26 26 H 1.09000 * 109.46768 * 59.99663 * 1 2 3 27 27 H 1.08993 * 109.47398 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.47157 * 299.99725 * 8 7 5 29 29 H 1.09004 * 109.47122 * 59.99858 * 8 7 5 30 30 H 1.09008 * 109.47105 * 300.00155 * 11 9 8 31 31 H 1.08998 * 109.47250 * 60.00220 * 11 9 8 32 32 H 1.08998 * 109.47192 * 59.99845 * 12 11 9 33 33 H 1.09000 * 109.47325 * 179.97438 * 12 11 9 34 34 H 0.96699 * 114.00121 * 179.97438 * 15 13 12 35 35 H 1.08998 * 109.47224 * 60.00129 * 16 13 12 36 36 H 1.08998 * 109.47273 * 180.02562 * 16 13 12 37 37 H 1.09006 * 109.46717 * 300.00085 * 17 9 8 38 38 H 1.09000 * 109.47227 * 59.99633 * 17 9 8 39 39 H 1.08001 * 120.05280 * 180.23233 * 18 4 3 40 40 H 1.08009 * 119.84772 * 180.02562 * 19 18 4 41 41 H 1.08996 * 109.47334 * 125.00056 * 21 20 19 42 42 H 0.96704 * 113.99741 * 59.99977 * 22 21 20 43 43 H 1.48507 * 109.99665 * 179.97438 * 23 21 20 44 44 H 1.48496 * 110.00050 * 301.31438 * 23 21 20 45 45 H 1.08003 * 119.95668 * 179.97438 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2085 0.0000 4 6 3.4447 1.2855 0.0005 5 6 4.2550 0.0542 0.0005 6 8 3.7100 -1.0317 0.0053 7 8 5.6002 0.1330 -0.0046 8 6 6.3339 -1.1201 -0.0037 9 6 7.8364 -0.8313 -0.0107 10 1 8.0853 -0.1813 0.8281 11 6 8.6089 -2.1459 0.1159 12 6 10.1113 -1.8571 0.1096 13 6 10.4923 -1.1660 -1.2012 14 1 10.2436 -1.8158 -2.0402 15 8 11.8957 -0.8968 -1.2074 16 6 9.7198 0.1485 -1.3279 17 6 8.2169 -0.1404 -1.3218 18 6 4.0673 2.5369 -0.0053 19 6 3.3041 3.6838 -0.0062 20 6 1.9208 3.6032 -0.0017 21 6 1.0971 4.8651 -0.0033 22 8 0.3637 4.9568 1.2198 23 14 2.2225 6.3411 -0.1646 24 6 1.2926 2.3739 0.0042 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 6.0773 -1.6907 0.8889 29 1 6.0707 -1.6958 -0.8911 30 1 8.3378 -2.6381 1.0500 31 1 8.3599 -2.7959 -0.7228 32 1 10.3600 -1.2073 0.9485 33 1 10.6617 -2.7936 0.2003 34 1 12.2086 -0.4586 -2.0107 35 1 9.9684 0.7984 -0.4889 36 1 9.9908 0.6407 -2.2619 37 1 7.9678 -0.7905 -2.1606 38 1 7.6665 0.7961 -1.4120 39 1 5.1452 2.6047 -0.0088 40 1 3.7862 4.6503 -0.0111 41 1 0.4023 4.8445 -0.8428 42 1 0.9194 4.9797 2.0108 43 1 1.4222 7.5920 -0.1680 44 1 3.1953 6.3630 0.9571 45 1 0.2140 2.3195 0.0081 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13470092_16737258.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:06:30 Heat of formation + Delta-G solvation = -185.883390 kcal Electronic energy + Delta-G solvation = -27540.195974 eV Core-core repulsion = 23489.322369 eV Total energy + Delta-G solvation = -4050.873604 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.154 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.87808 -40.84724 -39.94650 -39.20359 -37.63267 -37.40250 -36.44605 -33.21490 -31.87737 -31.82094 -31.43294 -28.62566 -27.90962 -26.36868 -23.98566 -23.73912 -23.43335 -22.33032 -21.80500 -20.92035 -19.34580 -18.75764 -18.21201 -18.14470 -17.72732 -17.42496 -16.82297 -16.81740 -16.45066 -16.28952 -15.98632 -15.74466 -15.52238 -15.21988 -15.10549 -14.76050 -14.43206 -14.28991 -13.94849 -13.69526 -13.60105 -13.39497 -13.26901 -13.13171 -12.96882 -12.70022 -12.52576 -12.31630 -12.19080 -12.17587 -11.84137 -11.74877 -11.69804 -11.46620 -11.24309 -11.13745 -10.77403 -10.73473 -10.19236 -9.44865 -5.05008 -0.45983 0.21617 1.13984 1.50545 1.56229 1.65064 1.86889 2.12700 2.57272 3.13486 3.17782 3.36036 3.54748 3.59234 3.63644 3.71384 3.81346 3.90361 3.98098 4.04359 4.15145 4.15307 4.16245 4.24211 4.29863 4.31738 4.36615 4.41642 4.42581 4.47467 4.54252 4.57663 4.65166 4.75071 4.89087 4.92116 4.99859 5.01515 5.04227 5.11097 5.11503 5.18133 5.27195 5.36486 5.46497 5.53167 6.19767 6.24641 6.69677 6.91905 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.283 6.283 3 C 0.193 3.807 4 C -0.160 4.160 5 C 0.508 3.492 6 O -0.487 6.487 7 O -0.354 6.354 8 C 0.074 3.926 9 C -0.089 4.089 10 H 0.086 0.914 11 C -0.111 4.111 12 C -0.111 4.111 13 C 0.102 3.898 14 H 0.055 0.945 15 O -0.569 6.569 16 C -0.152 4.152 17 C -0.112 4.112 18 C -0.016 4.016 19 C -0.173 4.173 20 C -0.041 4.041 21 C -0.083 4.083 22 O -0.527 6.527 23 Si 0.692 3.308 24 C -0.197 4.197 25 H 0.060 0.940 26 H 0.060 0.940 27 H 0.106 0.894 28 H 0.072 0.928 29 H 0.072 0.928 30 H 0.075 0.925 31 H 0.070 0.930 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.379 0.621 35 H 0.072 0.928 36 H 0.066 0.934 37 H 0.064 0.936 38 H 0.075 0.925 39 H 0.149 0.851 40 H 0.138 0.862 41 H 0.123 0.877 42 H 0.378 0.622 43 H -0.255 1.255 44 H -0.257 1.257 45 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.518 2.502 -2.577 3.629 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.194 6.194 3 C 0.145 3.855 4 C -0.162 4.162 5 C 0.352 3.648 6 O -0.374 6.374 7 O -0.272 6.272 8 C 0.000 4.000 9 C -0.107 4.107 10 H 0.104 0.896 11 C -0.148 4.148 12 C -0.148 4.148 13 C 0.043 3.957 14 H 0.073 0.927 15 O -0.375 6.375 16 C -0.189 4.189 17 C -0.149 4.149 18 C -0.035 4.035 19 C -0.191 4.191 20 C -0.042 4.042 21 C -0.193 4.193 22 O -0.333 6.333 23 Si 0.593 3.407 24 C -0.216 4.216 25 H 0.078 0.922 26 H 0.079 0.921 27 H 0.125 0.875 28 H 0.091 0.909 29 H 0.091 0.909 30 H 0.093 0.907 31 H 0.088 0.912 32 H 0.091 0.909 33 H 0.092 0.908 34 H 0.226 0.774 35 H 0.091 0.909 36 H 0.085 0.915 37 H 0.083 0.917 38 H 0.094 0.906 39 H 0.167 0.833 40 H 0.155 0.845 41 H 0.141 0.859 42 H 0.226 0.774 43 H -0.180 1.180 44 H -0.182 1.182 45 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 0.183 2.378 -2.029 3.131 hybrid contribution -0.583 -0.145 0.550 0.814 sum -0.399 2.233 -1.479 2.708 Atomic orbital electron populations 1.23253 0.77780 1.04836 1.01692 1.86346 1.21610 1.25174 1.86226 1.19057 0.90544 0.85264 0.90671 1.18482 0.89487 0.92237 1.15957 1.20760 0.81057 0.89143 0.73794 1.90906 1.72630 1.29367 1.44503 1.86490 1.19225 1.36859 1.84598 1.23139 0.90494 0.83422 1.02937 1.21269 0.91425 0.98163 0.99848 0.89600 1.21478 0.94066 0.96200 1.03094 1.21437 0.95117 1.01292 0.96994 1.21851 0.80632 0.95072 0.98100 0.92714 1.86520 1.23190 1.82519 1.45290 1.22281 0.95655 0.98220 1.02779 1.21541 0.95309 1.01378 0.96711 1.21282 1.00892 0.89733 0.91543 1.20947 0.92882 0.98931 1.06305 1.20365 0.93940 0.95268 0.94603 1.25192 1.02087 1.01750 0.90248 1.86623 1.35950 1.95469 1.15256 0.94778 0.79452 0.76206 0.90283 1.21082 1.00819 0.90736 1.08933 0.92166 0.92144 0.87535 0.90928 0.90950 0.90682 0.91171 0.90934 0.90819 0.77400 0.90909 0.91498 0.91697 0.90648 0.83290 0.84495 0.85935 0.77405 1.18020 1.18154 0.83984 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.28 -0.96 8.57 -40.48 -0.35 -1.31 16 3 C 0.19 0.46 6.70 -38.67 -0.26 0.20 16 4 C -0.16 -0.37 5.89 -104.86 -0.62 -0.98 16 5 C 0.51 1.97 7.89 34.46 0.27 2.24 16 6 O -0.49 -3.31 14.95 -26.59 -0.40 -3.71 16 7 O -0.35 -0.66 9.01 -40.63 -0.37 -1.02 16 8 C 0.07 0.04 4.85 37.16 0.18 0.22 16 9 C -0.09 0.09 2.43 -90.62 -0.22 -0.13 16 10 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 11 C -0.11 0.15 5.20 -26.73 -0.14 0.01 16 12 C -0.11 0.04 5.57 -26.73 -0.15 -0.11 16 13 C 0.10 -0.04 3.47 -26.74 -0.09 -0.13 16 14 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 15 O -0.57 -0.51 13.32 -35.23 -0.47 -0.98 16 16 C -0.15 0.20 5.55 -26.71 -0.15 0.05 16 17 C -0.11 0.14 5.11 -26.71 -0.14 0.01 16 18 C -0.02 0.01 9.61 -39.18 -0.38 -0.37 16 19 C -0.17 0.22 8.64 -39.63 -0.34 -0.12 16 20 C -0.04 0.03 5.36 -104.57 -0.56 -0.53 16 21 C -0.08 0.12 2.79 36.00 0.10 0.22 16 22 O -0.53 -0.04 12.83 -35.23 -0.45 -0.49 16 23 Si 0.69 -1.48 29.86 -169.99 -5.08 -6.56 16 24 C -0.20 -0.08 8.65 -39.47 -0.34 -0.42 16 25 H 0.06 -0.10 7.65 -51.93 -0.40 -0.50 16 26 H 0.06 -0.12 7.67 -51.93 -0.40 -0.52 16 27 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 29 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 30 H 0.07 -0.13 8.14 -51.92 -0.42 -0.55 16 31 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 32 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.38 -1.12 9.08 45.56 0.41 -0.71 16 35 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.06 -0.08 8.14 -51.93 -0.42 -0.51 16 38 H 0.07 -0.08 7.82 -51.93 -0.41 -0.49 16 39 H 0.15 -0.32 7.61 -52.49 -0.40 -0.72 16 40 H 0.14 -0.44 4.81 -52.48 -0.25 -0.69 16 41 H 0.12 -0.28 7.96 -51.93 -0.41 -0.69 16 42 H 0.38 -1.01 8.70 45.56 0.40 -0.61 16 43 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 44 H -0.26 0.10 7.00 56.52 0.40 0.50 16 45 H 0.14 -0.10 6.30 -52.48 -0.33 -0.43 16 LS Contribution 365.48 15.07 5.51 5.51 Total: 0.00 -8.47 365.48 -9.50 -17.98 By element: Atomic # 1 Polarization: -4.47 SS G_CDS: -6.06 Total: -10.54 kcal Atomic # 6 Polarization: 2.96 SS G_CDS: -1.84 Total: 1.13 kcal Atomic # 8 Polarization: -5.48 SS G_CDS: -2.03 Total: -7.52 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.08 Total: -6.56 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -8.47 -9.50 -17.98 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13470092_16737258.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -167.906 kcal (2) G-P(sol) polarization free energy of solvation -8.475 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.381 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.977 kcal (6) G-S(sol) free energy of system = (1) + (5) -185.883 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds