Wall clock time and date at job start Sat Mar 6 2021 03:55:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35641 * 116.99915 * 2 1 4 4 C 1.40195 * 120.15347 * 179.97438 * 3 2 1 5 5 C 1.47395 * 120.19691 * 359.95947 * 4 3 2 6 6 O 1.21514 * 120.00183 * 359.97438 * 5 4 3 7 7 O 1.34752 * 120.00189 * 179.97438 * 5 4 3 8 8 C 1.45201 * 117.00270 * 179.97438 * 7 5 4 9 9 C 1.52999 * 109.46950 * 180.02562 * 8 7 5 10 10 H 1.09000 * 112.91223 * 43.74661 * 9 8 7 11 11 C 1.53788 * 113.61258 * 175.00180 * 9 8 7 12 12 C 1.53780 * 87.17276 * 89.07238 * 11 9 8 13 13 O 1.42906 * 113.61476 * 270.92461 * 12 11 9 14 14 C 1.42898 * 113.99825 * 294.70428 * 13 12 11 15 15 C 1.52997 * 113.61365 * 140.02423 * 12 11 9 16 16 F 1.39902 * 109.47331 * 54.77576 * 15 12 11 17 17 F 1.39905 * 109.47281 * 174.77511 * 15 12 11 18 18 F 1.39899 * 109.47368 * 294.77353 * 15 12 11 19 19 C 1.53786 * 113.61050 * 272.49640 * 9 8 7 20 20 C 1.39770 * 119.60406 * 180.23084 * 4 3 2 21 21 C 1.37761 * 119.90055 * 359.44743 * 20 4 3 22 22 C 1.38566 * 120.31095 * 0.58425 * 21 20 4 23 23 C 1.50694 * 119.79831 * 179.71883 * 22 21 20 24 24 O 1.42906 * 109.46883 * 244.97198 * 23 22 21 25 25 Si 1.86302 * 109.47391 * 4.97103 * 23 22 21 26 26 C 1.38050 * 120.39932 * 359.68766 * 22 21 20 27 27 H 1.09003 * 109.47000 * 300.00107 * 1 2 3 28 28 H 1.08996 * 109.47042 * 59.99664 * 1 2 3 29 29 H 1.08995 * 109.47051 * 179.97438 * 1 2 3 30 30 H 1.08996 * 109.46721 * 60.00060 * 8 7 5 31 31 H 1.08996 * 109.46861 * 300.00135 * 8 7 5 32 32 H 1.08999 * 113.61115 * 203.66074 * 11 9 8 33 33 H 1.08998 * 113.61148 * 334.47752 * 11 9 8 34 34 H 1.09001 * 109.47107 * 177.13427 * 14 13 12 35 35 H 1.08995 * 109.47184 * 297.13981 * 14 13 12 36 36 H 1.09006 * 109.47107 * 57.13958 * 14 13 12 37 37 H 1.08987 * 113.61739 * 25.43381 * 19 9 8 38 38 H 1.09000 * 113.61087 * 156.33880 * 19 9 8 39 39 H 1.08000 * 120.05009 * 179.75326 * 20 4 3 40 40 H 1.08007 * 119.84444 * 180.29402 * 21 20 4 41 41 H 1.09006 * 109.47396 * 124.97389 * 23 22 21 42 42 H 0.96700 * 113.99867 * 179.97438 * 24 23 22 43 43 H 1.48500 * 109.99896 * 178.68020 * 25 23 22 44 44 H 1.48493 * 109.99955 * 300.00332 * 25 23 22 45 45 H 1.08002 * 119.95124 * 180.02562 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 3.4446 1.2857 0.0005 5 6 4.2549 0.0545 0.0020 6 8 3.7100 -1.0316 0.0032 7 8 5.6002 0.1332 0.0020 8 6 6.3339 -1.1198 0.0041 9 6 7.8364 -0.8309 0.0044 10 1 8.1158 -0.0376 0.6977 11 6 8.7062 -2.0929 0.1293 12 6 8.6688 -2.1782 -1.4057 13 8 7.5633 -2.9301 -1.9104 14 6 7.5980 -4.3166 -1.5667 15 6 10.0037 -2.5905 -2.0293 16 9 10.4313 -3.7955 -1.4615 17 9 9.8424 -2.7564 -3.4090 18 9 10.9581 -1.5966 -1.7876 19 6 8.4303 -0.6563 -1.4033 20 6 4.0672 2.5371 0.0054 21 6 3.3039 3.6839 -0.0018 22 6 1.9206 3.6033 -0.0018 23 6 1.0969 4.8652 -0.0034 24 8 0.3591 4.9539 1.2173 25 14 2.2227 6.3415 -0.1573 26 6 1.2925 2.3739 -0.0010 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3633 -1.0276 -0.0005 30 1 6.0741 -1.6943 -0.8850 31 1 6.0740 -1.6915 0.8949 32 1 9.7006 -1.8997 0.5317 33 1 8.2028 -2.9228 0.6252 34 1 6.7002 -4.8069 -1.9431 35 1 8.4787 -4.7794 -2.0120 36 1 7.6416 -4.4212 -0.4825 37 1 7.7038 -0.3270 -2.1460 38 1 9.3493 -0.0704 -1.4199 39 1 5.1450 2.6049 0.0099 40 1 3.7859 4.6504 -0.0029 41 1 0.4050 4.8464 -0.8455 42 1 -0.1945 5.7438 1.2857 43 1 1.4203 7.5906 -0.1921 44 1 3.1708 6.3785 0.9849 45 1 0.2138 2.3195 -0.0013 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13470092_17321610.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 03:55:05 Heat of formation + Delta-G solvation = -274.964304 kcal Electronic energy + Delta-G solvation = -35565.690195 eV Core-core repulsion = 30102.591825 eV Total energy + Delta-G solvation = -5463.098370 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.126 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -51.13695 -48.68523 -48.56862 -41.90386 -41.45715 -40.41235 -39.07390 -37.64887 -37.45885 -36.72398 -33.24782 -31.38315 -30.69513 -28.59891 -28.37009 -27.90808 -26.92338 -26.78580 -23.78376 -23.47358 -23.13580 -21.83957 -20.68586 -19.75941 -19.43265 -19.22188 -19.11442 -18.68114 -18.36360 -17.87808 -17.44300 -17.16121 -17.05180 -16.66811 -16.52259 -16.23536 -15.92066 -15.84296 -15.63439 -15.52185 -15.47198 -15.14778 -15.01029 -14.80011 -14.72970 -14.61889 -14.54218 -14.22816 -14.10876 -14.05995 -13.73775 -13.47700 -13.33368 -13.14138 -12.93854 -12.80658 -12.74977 -12.38251 -12.31937 -12.10938 -12.06931 -11.77875 -11.71538 -11.51586 -11.20799 -10.81003 -10.67421 -10.10594 -9.38163 -5.04779 -0.39796 0.28614 1.13993 1.50954 1.58016 1.60600 1.62303 1.86412 2.03743 2.17631 2.56904 2.59736 2.65375 2.85989 3.12633 3.22896 3.34031 3.45017 3.53151 3.64970 3.69805 3.87045 3.99087 4.06521 4.10682 4.12766 4.19031 4.19684 4.26227 4.28950 4.29552 4.36883 4.43811 4.46949 4.53949 4.57502 4.61510 4.68338 4.70513 4.74222 4.89529 5.01580 5.07338 5.27043 5.51998 5.54533 5.66095 6.24740 6.28367 6.95912 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.283 6.283 3 C 0.193 3.807 4 C -0.160 4.160 5 C 0.511 3.489 6 O -0.485 6.485 7 O -0.354 6.354 8 C 0.080 3.920 9 C -0.099 4.099 10 H 0.108 0.892 11 C -0.143 4.143 12 C 0.037 3.963 13 O -0.331 6.331 14 C 0.011 3.989 15 C 0.437 3.563 16 F -0.182 7.182 17 F -0.174 7.174 18 F -0.175 7.175 19 C -0.111 4.111 20 C -0.016 4.016 21 C -0.169 4.169 22 C 0.004 3.996 23 C -0.086 4.086 24 O -0.534 6.534 25 Si 0.690 3.310 26 C -0.196 4.196 27 H 0.059 0.941 28 H 0.059 0.941 29 H 0.106 0.894 30 H 0.092 0.908 31 H 0.074 0.926 32 H 0.113 0.887 33 H 0.095 0.905 34 H 0.103 0.897 35 H 0.053 0.947 36 H 0.055 0.945 37 H 0.099 0.901 38 H 0.117 0.883 39 H 0.151 0.849 40 H 0.138 0.862 41 H 0.082 0.918 42 H 0.383 0.617 43 H -0.260 1.260 44 H -0.251 1.251 45 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.372 3.620 -0.385 3.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.193 6.193 3 C 0.145 3.855 4 C -0.162 4.162 5 C 0.355 3.645 6 O -0.373 6.373 7 O -0.272 6.272 8 C 0.007 3.993 9 C -0.118 4.118 10 H 0.126 0.874 11 C -0.181 4.181 12 C -0.006 4.006 13 O -0.249 6.249 14 C -0.085 4.085 15 C 0.383 3.617 16 F -0.163 7.163 17 F -0.155 7.155 18 F -0.156 7.156 19 C -0.148 4.148 20 C -0.034 4.034 21 C -0.187 4.187 22 C 0.004 3.996 23 C -0.195 4.195 24 O -0.342 6.342 25 Si 0.590 3.410 26 C -0.215 4.215 27 H 0.078 0.922 28 H 0.078 0.922 29 H 0.124 0.876 30 H 0.110 0.890 31 H 0.093 0.907 32 H 0.131 0.869 33 H 0.113 0.887 34 H 0.121 0.879 35 H 0.072 0.928 36 H 0.074 0.926 37 H 0.118 0.882 38 H 0.135 0.865 39 H 0.169 0.831 40 H 0.155 0.845 41 H 0.100 0.900 42 H 0.231 0.769 43 H -0.185 1.185 44 H -0.176 1.176 45 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.983 3.283 -0.035 3.427 hybrid contribution -0.880 -0.238 0.629 1.108 sum -1.863 3.044 0.594 3.618 Atomic orbital electron populations 1.23243 0.77884 1.04775 1.01641 1.86343 1.21538 1.25158 1.86297 1.19015 0.90525 0.85186 0.90769 1.18450 0.89441 0.92186 1.16125 1.20723 0.80858 0.89165 0.73787 1.90908 1.72559 1.29328 1.44468 1.86456 1.19409 1.36585 1.84726 1.22951 0.88706 0.83588 1.04063 1.22108 0.92553 0.98900 0.98203 0.87408 1.23597 1.02549 0.99327 0.92618 1.24103 0.83891 0.96911 0.95657 1.88103 1.40245 1.21158 1.75382 1.23144 1.03866 0.80606 1.00892 1.21170 0.88195 0.75027 0.77331 1.93192 1.91548 1.46844 1.84742 1.93222 1.95633 1.95271 1.31401 1.93177 1.66911 1.61410 1.94127 1.23324 1.03868 0.89249 0.98403 1.21262 1.00904 0.89623 0.91609 1.20876 0.92666 0.98970 1.06200 1.19296 0.93165 0.93279 0.93888 1.24939 1.00824 1.04135 0.89580 1.86587 1.62251 1.47720 1.37617 0.94835 0.81527 0.75076 0.89528 1.21044 1.00727 0.90774 1.08958 0.92194 0.92208 0.87567 0.88986 0.90736 0.86864 0.88668 0.87906 0.92833 0.92614 0.88207 0.86463 0.83122 0.84485 0.90046 0.76894 1.18490 1.17595 0.84132 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.28 -1.07 8.57 -40.50 -0.35 -1.41 16 3 C 0.19 0.58 6.70 -38.67 -0.26 0.32 16 4 C -0.16 -0.45 5.88 -104.86 -0.62 -1.07 16 5 C 0.51 2.11 7.89 34.46 0.27 2.38 16 6 O -0.49 -3.38 14.95 -26.60 -0.40 -3.78 16 7 O -0.35 -0.70 9.47 -40.63 -0.38 -1.08 16 8 C 0.08 0.05 5.06 37.16 0.19 0.24 16 9 C -0.10 0.17 4.21 -89.80 -0.38 -0.21 16 10 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 11 C -0.14 0.29 6.50 -25.92 -0.17 0.12 16 12 C 0.04 -0.01 0.85 -89.67 -0.08 -0.08 16 13 O -0.33 -0.35 8.36 -35.23 -0.29 -0.64 16 14 C 0.01 -0.01 10.34 101.05 1.04 1.04 16 15 C 0.44 0.55 2.52 37.16 0.09 0.64 16 16 F -0.18 -0.29 15.38 2.25 0.03 -0.26 16 17 F -0.17 -0.53 17.10 2.25 0.04 -0.49 16 18 F -0.17 -0.19 15.83 2.25 0.04 -0.16 16 19 C -0.11 0.15 6.90 -25.77 -0.18 -0.03 16 20 C -0.02 0.00 9.61 -39.18 -0.38 -0.38 16 21 C -0.17 0.05 8.64 -39.63 -0.34 -0.29 16 22 C 0.00 0.00 5.39 -104.57 -0.56 -0.56 16 23 C -0.09 0.10 2.78 36.00 0.10 0.20 16 24 O -0.53 -0.03 12.81 -35.23 -0.45 -0.48 16 25 Si 0.69 -1.41 29.83 -169.99 -5.07 -6.48 16 26 C -0.20 -0.25 8.65 -39.48 -0.34 -0.59 16 27 H 0.06 -0.07 7.66 -51.93 -0.40 -0.47 16 28 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 29 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 30 H 0.09 0.17 6.12 -51.93 -0.32 -0.14 16 31 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 32 H 0.11 -0.35 8.06 -51.93 -0.42 -0.77 16 33 H 0.09 -0.24 6.64 -51.93 -0.34 -0.59 16 34 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.05 -0.01 6.59 -51.93 -0.34 -0.36 16 36 H 0.06 -0.10 6.60 -51.93 -0.34 -0.45 16 37 H 0.10 -0.08 8.10 -51.94 -0.42 -0.50 16 38 H 0.12 -0.30 7.02 -51.93 -0.36 -0.66 16 39 H 0.15 -0.29 7.61 -52.49 -0.40 -0.69 16 40 H 0.14 -0.32 4.83 -52.48 -0.25 -0.57 16 41 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 42 H 0.38 -1.51 8.74 45.56 0.40 -1.11 16 43 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 44 H -0.25 -0.22 7.04 56.52 0.40 0.17 16 45 H 0.14 -0.03 6.30 -52.49 -0.33 -0.36 16 LS Contribution 380.66 15.07 5.74 5.74 Total: 0.00 -8.91 380.66 -6.95 -15.86 By element: Atomic # 1 Polarization: -4.29 SS G_CDS: -5.24 Total: -9.53 kcal Atomic # 6 Polarization: 3.33 SS G_CDS: -0.61 Total: 2.72 kcal Atomic # 8 Polarization: -5.52 SS G_CDS: -1.88 Total: -7.40 kcal Atomic # 9 Polarization: -1.01 SS G_CDS: 0.11 Total: -0.90 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.07 Total: -6.48 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -8.91 -6.95 -15.86 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13470092_17321610.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -259.105 kcal (2) G-P(sol) polarization free energy of solvation -8.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -268.014 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.950 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.860 kcal (6) G-S(sol) free energy of system = (1) + (5) -274.964 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds