Wall clock time and date at job start Sat Mar 6 2021 04:51:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34231 * 116.99779 * 2 1 4 4 O 1.20824 * 120.00095 * 0.02562 * 3 2 1 5 5 C 1.50697 * 119.99786 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.84685 * 48.81123 * 5 3 2 7 7 C 1.53780 * 113.61495 * 180.02562 * 5 3 2 8 8 C 1.53773 * 87.08100 * 140.06820 * 7 5 3 9 9 H 1.09009 * 113.61580 * 89.20075 * 8 7 5 10 10 C 1.50700 * 113.61589 * 220.01947 * 8 7 5 11 11 O 1.20822 * 119.99958 * 359.97438 * 10 8 7 12 12 O 1.34234 * 120.00068 * 180.02562 * 10 8 7 13 13 C 1.45196 * 116.99938 * 179.97438 * 12 10 8 14 14 C 1.50704 * 109.47016 * 179.97438 * 13 12 10 15 15 C 1.38935 * 120.03928 * 180.02562 * 14 13 12 16 16 O 1.34879 * 120.99514 * 359.97438 * 15 14 13 17 17 C 1.33718 * 122.41442 * 179.97438 * 16 15 14 18 18 C 1.34541 * 122.85592 * 359.97438 * 17 16 15 19 19 C 1.50703 * 120.20210 * 180.02562 * 18 17 16 20 20 O 1.42902 * 109.46854 * 250.00356 * 19 18 17 21 21 Si 1.86298 * 109.47132 * 9.99931 * 19 18 17 22 22 C 1.41995 * 119.59561 * 0.02575 * 18 17 16 23 23 O 1.21914 * 121.41007 * 180.02562 * 22 18 17 24 24 C 1.40457 * 119.33370 * 179.97438 * 15 14 13 25 25 C 1.39342 * 120.24155 * 359.97438 * 24 15 14 26 26 C 1.37882 * 119.52693 * 0.02562 * 25 24 15 27 27 Br 1.89098 * 119.86614 * 179.97438 * 26 25 24 28 28 C 1.37873 * 120.04013 * 359.72388 * 14 13 12 29 29 C 1.53779 * 113.69475 * 277.54110 * 5 3 2 30 30 H 1.09000 * 109.47322 * 179.97438 * 1 2 3 31 31 H 1.09002 * 109.47314 * 299.99706 * 1 2 3 32 32 H 1.09003 * 109.47221 * 59.99373 * 1 2 3 33 33 H 1.08997 * 113.61550 * 25.52060 * 7 5 3 34 34 H 1.09001 * 113.61563 * 254.61678 * 7 5 3 35 35 H 1.08996 * 109.47465 * 299.99911 * 13 12 10 36 36 H 1.08999 * 109.47008 * 59.99921 * 13 12 10 37 37 H 1.07998 * 118.57416 * 180.02562 * 17 16 15 38 38 H 1.08997 * 109.47247 * 130.00511 * 19 18 17 39 39 H 0.96695 * 114.00527 * 59.99603 * 20 19 18 40 40 H 1.48497 * 109.99955 * 180.02562 * 21 19 18 41 41 H 1.48498 * 110.00040 * 301.32025 * 21 19 18 42 42 H 1.08004 * 120.23797 * 179.97438 * 25 24 15 43 43 H 1.08000 * 119.64564 * 359.97438 * 28 14 13 44 44 H 1.08995 * 113.61581 * 105.45960 * 29 5 3 45 45 H 1.09002 * 113.60898 * 334.55147 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0238 0.6363 -0.7550 7 6 4.1077 2.7142 0.0011 8 6 5.1820 2.2261 0.9872 9 1 6.0819 1.8491 0.5011 10 6 5.4805 3.2088 2.0900 11 8 4.8933 4.2639 2.1343 12 8 6.3995 2.9125 3.0224 13 6 6.6357 3.9063 4.0543 14 6 7.6910 3.4024 5.0049 15 6 8.0874 4.1849 6.0823 16 8 7.5415 5.3996 6.2966 17 6 7.9013 6.1759 7.3242 18 6 8.8322 5.8104 8.2242 19 6 9.1915 6.7329 9.3605 20 8 10.5098 7.2461 9.1587 21 14 7.9779 8.1451 9.4214 22 6 9.4741 4.5503 8.0969 23 8 10.3218 4.1856 8.8937 24 6 9.0717 3.7004 6.9593 25 6 9.6432 2.4471 6.7495 26 6 9.2359 1.6859 5.6743 27 35 10.0056 -0.0161 5.3800 28 6 8.2596 2.1616 4.8101 29 6 4.1925 1.1230 1.3968 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3634 0.5138 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 3.4177 3.4401 0.4313 34 1 4.5098 3.0299 -0.9616 35 1 6.9742 4.8346 3.5941 36 1 5.7110 4.0884 4.6019 37 1 7.4233 7.1377 7.4371 38 1 9.1558 6.1824 10.3006 39 1 10.6152 7.7483 8.3392 40 1 8.3217 9.0624 10.5374 41 1 7.9940 8.8844 8.1336 42 1 10.4004 2.0748 7.4237 43 1 7.9444 1.5548 3.9741 44 1 4.6631 0.1537 1.5612 45 1 3.5256 1.4141 2.2084 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_13604712_484008.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:51:23 Heat of formation + Delta-G solvation = -173.101510 kcal Electronic energy + Delta-G solvation = -35396.901071 eV Core-core repulsion = 30167.570019 eV Total energy + Delta-G solvation = -5229.331051 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 453.033 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -43.36238 -42.32845 -41.41797 -40.06832 -40.00102 -39.26340 -37.98229 -37.58331 -37.24911 -34.63720 -33.68832 -33.14962 -30.73663 -30.22397 -28.74432 -27.65378 -27.50330 -27.06468 -25.89263 -24.49715 -24.19943 -22.46640 -21.82562 -20.79213 -20.58847 -19.68560 -19.36329 -18.96473 -18.48532 -18.03673 -17.96743 -17.68070 -17.55934 -17.44804 -17.02806 -16.65712 -16.55985 -16.36986 -16.23371 -16.06967 -15.70206 -15.27169 -15.14768 -15.03713 -14.63689 -14.46980 -14.37042 -14.09978 -14.00804 -13.93360 -13.86099 -13.47877 -13.31838 -13.03978 -12.82447 -12.76102 -12.56459 -12.42154 -12.30315 -11.94639 -11.86540 -11.84472 -11.82059 -11.62304 -11.48403 -11.35225 -11.24288 -10.71723 -10.57178 -10.42838 -9.57643 -5.22048 -0.82963 -0.70577 0.00345 0.35355 0.90263 0.96227 1.01448 1.11916 1.21327 1.26594 1.44010 1.70359 1.77542 2.32180 2.70316 2.84543 2.99315 2.99700 3.10818 3.17882 3.24285 3.28805 3.40711 3.60525 3.66956 3.77378 3.81672 3.87804 3.90672 3.99431 4.06715 4.13409 4.13839 4.21601 4.25768 4.26668 4.32008 4.42443 4.48965 4.56095 4.57665 4.59593 4.65440 4.70051 4.78514 5.00474 5.05043 5.20064 5.34285 5.71955 6.31214 6.42830 6.53981 6.68512 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.357 6.357 3 C 0.469 3.531 4 O -0.499 6.499 5 C -0.110 4.110 6 H 0.135 0.865 7 C -0.102 4.102 8 C -0.109 4.109 9 H 0.137 0.863 10 C 0.475 3.525 11 O -0.493 6.493 12 O -0.353 6.353 13 C 0.117 3.883 14 C -0.106 4.106 15 C 0.162 3.838 16 O -0.212 6.212 17 C 0.137 3.863 18 C -0.310 4.310 19 C -0.047 4.047 20 O -0.517 6.517 21 Si 0.676 3.324 22 C 0.433 3.567 23 O -0.439 6.439 24 C -0.211 4.211 25 C 0.002 3.998 26 C -0.120 4.120 27 Br -0.024 7.024 28 C -0.012 4.012 29 C -0.103 4.103 30 H 0.104 0.896 31 H 0.064 0.936 32 H 0.064 0.936 33 H 0.114 0.886 34 H 0.093 0.907 35 H 0.095 0.905 36 H 0.096 0.904 37 H 0.203 0.797 38 H 0.125 0.875 39 H 0.373 0.627 40 H -0.245 1.245 41 H -0.252 1.252 42 H 0.156 0.844 43 H 0.162 0.838 44 H 0.101 0.899 45 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.721 -2.304 -3.404 5.544 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.311 3.689 4 O -0.386 6.386 5 C -0.129 4.129 6 H 0.153 0.847 7 C -0.139 4.139 8 C -0.128 4.128 9 H 0.155 0.845 10 C 0.318 3.682 11 O -0.379 6.379 12 O -0.270 6.270 13 C 0.043 3.957 14 C -0.107 4.107 15 C 0.116 3.884 16 O -0.115 6.115 17 C 0.072 3.928 18 C -0.313 4.313 19 C -0.157 4.157 20 O -0.323 6.323 21 Si 0.576 3.424 22 C 0.315 3.685 23 O -0.318 6.318 24 C -0.214 4.214 25 C -0.017 4.017 26 C -0.200 4.200 27 Br 0.062 6.938 28 C -0.032 4.032 29 C -0.140 4.140 30 H 0.122 0.878 31 H 0.083 0.917 32 H 0.083 0.917 33 H 0.133 0.867 34 H 0.111 0.889 35 H 0.113 0.887 36 H 0.114 0.886 37 H 0.218 0.782 38 H 0.143 0.857 39 H 0.220 0.780 40 H -0.168 1.168 41 H -0.177 1.177 42 H 0.173 0.827 43 H 0.180 0.820 44 H 0.120 0.880 45 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -3.557 -1.866 -2.670 4.823 hybrid contribution 0.716 0.712 -0.445 1.104 sum -2.841 -1.154 -3.115 4.371 Atomic orbital electron populations 1.23337 0.75819 1.04067 1.02782 1.86510 1.23813 1.33187 1.83826 1.23428 0.91535 0.81526 0.72402 1.90712 1.66874 1.36415 1.44599 1.22468 0.88051 1.01126 1.01280 0.84684 1.23017 0.96002 0.95037 0.99817 1.22511 1.00642 0.95722 0.93938 0.84522 1.23428 0.76111 0.87048 0.81660 1.90733 1.48350 1.25039 1.73763 1.86412 1.56259 1.47268 1.37085 1.21523 0.97432 0.90168 0.86534 1.18794 1.01450 0.94771 0.95693 1.18890 0.92447 0.83042 0.93992 1.83113 1.58423 1.25794 1.44213 1.23974 0.92450 0.93281 0.83141 1.22003 1.04671 1.01260 1.03382 1.24702 0.91323 1.01591 0.98060 1.86713 1.27783 1.72287 1.45484 0.95589 0.86178 0.79043 0.81628 1.18238 0.81828 0.85178 0.83270 1.90783 1.26955 1.73545 1.40494 1.20729 1.01682 0.98619 1.00345 1.21143 0.95835 0.90543 0.94226 1.21845 1.02443 0.95588 1.00112 1.96850 1.82050 1.18583 1.96303 1.21054 0.91271 0.93398 0.97450 1.22859 0.96411 0.99345 0.95424 0.87772 0.91726 0.91679 0.86741 0.88857 0.88712 0.88650 0.78159 0.85697 0.78006 1.16836 1.17714 0.82656 0.82046 0.88015 0.88712 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.15 10.57 -39.26 -0.41 -0.57 16 3 C 0.47 0.41 7.49 36.00 0.27 0.68 16 4 O -0.50 -2.10 15.65 -18.75 -0.29 -2.39 16 5 C -0.11 0.29 4.26 -90.96 -0.39 -0.10 16 6 H 0.14 -0.69 8.14 -51.93 -0.42 -1.11 16 7 C -0.10 0.19 6.73 -25.92 -0.17 0.01 16 8 C -0.11 0.36 4.26 -90.98 -0.39 -0.03 16 9 H 0.14 -0.80 8.14 -51.92 -0.42 -1.22 16 10 C 0.48 -0.26 7.48 36.01 0.27 0.01 16 11 O -0.49 -1.34 15.65 -18.75 -0.29 -1.63 16 12 O -0.35 0.49 8.68 -39.27 -0.34 0.15 16 13 C 0.12 -0.18 5.38 36.01 0.19 0.01 16 14 C -0.11 0.12 5.89 -104.50 -0.62 -0.50 16 15 C 0.16 -0.06 6.74 -38.49 -0.26 -0.32 16 16 O -0.21 0.36 9.21 5.65 0.05 0.42 16 17 C 0.14 -0.37 9.99 29.43 0.29 -0.08 16 18 C -0.31 0.09 5.32 -104.49 -0.56 -0.47 16 19 C -0.05 0.01 2.46 36.01 0.09 0.10 16 20 O -0.52 -0.93 12.88 -35.23 -0.45 -1.38 16 21 Si 0.68 -1.94 30.06 -169.99 -5.11 -7.05 16 22 C 0.43 1.13 6.98 -34.33 -0.24 0.89 16 23 O -0.44 -2.65 16.93 5.00 0.08 -2.57 16 24 C -0.21 -0.25 5.89 -104.84 -0.62 -0.86 16 25 C 0.00 0.00 9.40 -39.30 -0.37 -0.37 16 26 C -0.12 0.01 6.22 -39.51 -0.25 -0.24 16 27 Br -0.02 0.00 33.69 -68.01 -2.29 -2.29 16 28 C -0.01 0.01 9.10 -39.51 -0.36 -0.35 16 29 C -0.10 0.37 7.18 -25.94 -0.19 0.18 16 30 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 31 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 32 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 33 H 0.11 0.13 6.73 -51.93 -0.35 -0.22 16 34 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 35 H 0.09 -0.17 8.13 -51.93 -0.42 -0.59 16 36 H 0.10 -0.18 8.13 -51.93 -0.42 -0.60 16 37 H 0.20 -1.16 4.61 -52.49 -0.24 -1.40 16 38 H 0.13 0.04 7.96 -51.93 -0.41 -0.38 16 39 H 0.37 -0.72 8.70 45.56 0.40 -0.33 16 40 H -0.24 -0.21 7.11 56.52 0.40 0.19 16 41 H -0.25 0.59 6.86 56.52 0.39 0.98 16 42 H 0.16 0.16 7.81 -52.48 -0.41 -0.25 16 43 H 0.16 -0.40 6.96 -52.49 -0.37 -0.77 16 44 H 0.10 -0.55 8.14 -51.93 -0.42 -0.98 16 45 H 0.09 -0.23 8.05 -51.93 -0.42 -0.65 16 LS Contribution 412.64 15.07 6.22 6.22 Total: 0.00 -11.42 412.64 -9.87 -21.30 By element: Atomic # 1 Polarization: -5.00 SS G_CDS: -4.82 Total: -9.81 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -2.22 Total: -0.39 kcal Atomic # 8 Polarization: -6.31 SS G_CDS: -1.66 Total: -7.97 kcal Atomic # 14 Polarization: -1.94 SS G_CDS: -5.11 Total: -7.05 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -2.29 Total: -2.29 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -11.42 -9.87 -21.30 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_13604712_484008.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -151.805 kcal (2) G-P(sol) polarization free energy of solvation -11.423 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.873 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.296 kcal (6) G-S(sol) free energy of system = (1) + (5) -173.102 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds