Wall clock time and date at job start Sat Mar 6 2021 04:33:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 O 1.42899 * 112.90489 * 99.16370 * 3 2 1 5 5 C 1.53787 * 113.61043 * 230.40889 * 3 2 1 6 6 C 1.53784 * 87.07923 * 89.12069 * 5 3 2 7 7 H 1.09000 * 113.61578 * 270.88484 * 6 5 3 8 8 C 1.50701 * 113.61605 * 139.97671 * 6 5 3 9 9 O 1.20826 * 119.99632 * 0.02562 * 8 6 5 10 10 O 1.34226 * 120.00175 * 179.97438 * 8 6 5 11 11 C 1.45202 * 117.00062 * 180.02562 * 10 8 6 12 12 C 1.50700 * 109.47080 * 180.02562 * 11 10 8 13 13 C 1.37825 * 120.03707 * 359.71962 * 12 11 10 14 14 C 1.38843 * 120.69738 * 179.67797 * 13 12 11 15 15 Br 1.89097 * 119.86185 * 180.30370 * 14 13 12 16 16 C 1.37853 * 120.27514 * 0.62766 * 14 13 12 17 17 C 1.39380 * 119.52557 * 359.67720 * 16 14 13 18 18 C 1.38978 * 120.03992 * 180.02562 * 12 11 10 19 19 O 1.34886 * 120.98359 * 359.97240 * 18 12 11 20 20 C 1.33706 * 122.41158 * 179.97438 * 19 18 12 21 21 C 1.34543 * 122.85289 * 0.04512 * 20 19 18 22 22 C 1.50701 * 120.20272 * 179.97438 * 21 20 19 23 23 O 1.42904 * 109.47139 * 249.97584 * 22 21 20 24 24 Si 1.86299 * 109.47468 * 9.97750 * 22 21 20 25 25 C 1.41994 * 119.58976 * 359.97438 * 21 20 19 26 26 O 1.21921 * 121.40984 * 179.97438 * 25 21 20 27 27 C 1.53778 * 113.61868 * 327.90539 * 3 2 1 28 28 H 0.96698 * 114.00160 * 311.24298 * 4 3 2 29 29 H 1.09004 * 113.61202 * 203.66822 * 5 3 2 30 30 H 1.08994 * 113.61447 * 334.57253 * 5 3 2 31 31 H 1.08998 * 109.46497 * 300.00228 * 11 10 8 32 32 H 1.09004 * 109.46911 * 59.99875 * 11 10 8 33 33 H 1.07997 * 119.65233 * 0.02562 * 13 12 11 34 34 H 1.08004 * 120.23560 * 179.65787 * 16 14 13 35 35 H 1.07997 * 118.57674 * 179.97438 * 20 19 18 36 36 H 1.09000 * 109.46660 * 129.98226 * 22 21 20 37 37 H 0.96694 * 113.99951 * 180.02562 * 23 22 21 38 38 H 1.48498 * 110.00010 * 178.67997 * 24 22 21 39 39 H 1.48503 * 109.99830 * 300.00175 * 24 22 21 40 40 H 1.08999 * 113.61111 * 25.43877 * 27 3 2 41 41 H 1.08999 * 113.61280 * 156.25260 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 8 3.1641 0.2105 -1.2995 5 6 3.2235 0.8990 1.0859 6 6 3.1711 -0.3242 2.0165 7 1 2.2350 -0.4136 2.5678 8 6 4.3861 -0.4656 2.8968 9 8 5.2808 0.3434 2.8260 10 8 4.4740 -1.4897 3.7600 11 6 5.6725 -1.5625 4.5766 12 6 5.5942 -2.7684 5.4771 13 6 4.4894 -3.5912 5.4338 14 6 4.4059 -4.7094 6.2525 15 35 2.8828 -5.8269 6.1676 16 6 5.4257 -5.0047 7.1318 17 6 6.5451 -4.1762 7.1886 18 6 6.6332 -3.0485 6.3566 19 8 7.7218 -2.2546 6.4206 20 6 8.7372 -2.4968 7.2561 21 6 8.7564 -3.5475 8.0963 22 6 9.9329 -3.7639 9.0129 23 8 10.6670 -4.9120 8.5827 24 14 11.0397 -2.2660 8.9669 25 6 7.6612 -4.4511 8.1141 26 8 7.6441 -5.4141 8.8617 27 6 3.2246 -1.1927 0.7486 28 1 2.7810 -0.3516 -1.9868 29 1 4.2364 1.2299 0.8563 30 1 2.5716 1.7143 1.3993 31 1 6.5469 -1.6473 3.9314 32 1 5.7544 -0.6604 5.1829 33 1 3.6825 -3.3669 4.7519 34 1 5.3576 -5.8716 7.7723 35 1 9.5791 -1.8204 7.2557 36 1 9.5763 -3.9211 10.0308 37 1 11.4398 -5.1118 9.1284 38 1 12.1871 -2.4538 9.8908 39 1 11.5325 -2.0409 7.5843 40 1 2.5736 -2.0659 0.7897 41 1 4.2373 -1.4345 0.4258 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_14580220_484008.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:33:05 Heat of formation + Delta-G solvation = -97.612642 kcal Electronic energy + Delta-G solvation = -32698.331371 eV Core-core repulsion = 27752.841522 eV Total energy + Delta-G solvation = -4945.489849 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 436.013 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -43.33204 -42.31508 -40.79346 -40.02695 -39.75632 -37.97478 -37.73736 -37.13140 -36.38429 -34.70281 -33.72405 -33.15738 -30.71227 -29.21977 -27.65343 -27.49969 -27.36820 -25.84109 -24.37764 -23.95719 -22.43016 -21.83701 -20.67290 -20.00365 -19.55080 -18.89381 -18.71929 -18.54832 -17.99574 -17.90492 -17.48470 -17.08503 -16.64590 -16.49318 -16.25602 -16.18836 -15.78077 -15.68913 -15.55757 -15.28310 -15.18390 -14.90495 -14.76889 -14.44924 -14.32690 -14.12487 -13.97871 -13.84629 -13.71887 -13.51020 -13.27173 -13.06106 -12.94749 -12.67903 -12.66085 -12.43032 -12.31219 -12.08545 -11.83204 -11.70002 -11.46969 -11.42016 -11.05448 -10.65712 -10.53115 -10.41517 -9.55156 -5.23768 -0.80386 -0.68382 0.03105 0.36646 0.90480 0.92316 1.00156 1.14527 1.31770 1.32526 1.34791 1.45956 1.70538 2.24338 2.32794 2.65772 2.75041 2.84561 2.87462 3.02377 3.04597 3.21268 3.28060 3.42596 3.50652 3.67686 3.74508 3.78718 3.80562 3.91113 3.99438 4.06459 4.22219 4.22735 4.27228 4.29919 4.37959 4.51441 4.53719 4.59245 4.66742 4.76224 4.80747 5.01844 5.15217 5.74891 6.09039 6.18833 6.34490 6.45765 6.47382 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.386 5.386 2 C 0.187 3.813 3 C 0.204 3.796 4 O -0.521 6.521 5 C -0.091 4.091 6 C -0.113 4.113 7 H 0.134 0.866 8 C 0.481 3.519 9 O -0.491 6.491 10 O -0.352 6.352 11 C 0.118 3.882 12 C -0.106 4.106 13 C -0.012 4.012 14 C -0.121 4.121 15 Br -0.024 7.024 16 C 0.003 3.997 17 C -0.210 4.210 18 C 0.163 3.837 19 O -0.210 6.210 20 C 0.140 3.860 21 C -0.265 4.265 22 C -0.049 4.049 23 O -0.530 6.530 24 Si 0.671 3.329 25 C 0.434 3.566 26 O -0.443 6.443 27 C -0.130 4.130 28 H 0.391 0.609 29 H 0.129 0.871 30 H 0.097 0.903 31 H 0.096 0.904 32 H 0.097 0.903 33 H 0.162 0.838 34 H 0.156 0.844 35 H 0.203 0.797 36 H 0.084 0.916 37 H 0.383 0.617 38 H -0.249 1.249 39 H -0.246 1.246 40 H 0.097 0.903 41 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.000 3.321 -0.451 3.903 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.063 5.063 2 C -0.133 4.133 3 C 0.159 3.841 4 O -0.326 6.326 5 C -0.129 4.129 6 C -0.132 4.132 7 H 0.152 0.848 8 C 0.323 3.677 9 O -0.377 6.377 10 O -0.269 6.269 11 C 0.044 3.956 12 C -0.108 4.108 13 C -0.032 4.032 14 C -0.200 4.200 15 Br 0.061 6.939 16 C -0.017 4.017 17 C -0.213 4.213 18 C 0.117 3.883 19 O -0.114 6.114 20 C 0.075 3.925 21 C -0.267 4.267 22 C -0.158 4.158 23 O -0.337 6.337 24 Si 0.571 3.429 25 C 0.316 3.684 26 O -0.322 6.322 27 C -0.169 4.169 28 H 0.240 0.760 29 H 0.147 0.853 30 H 0.115 0.885 31 H 0.114 0.886 32 H 0.115 0.885 33 H 0.179 0.821 34 H 0.173 0.827 35 H 0.219 0.781 36 H 0.102 0.898 37 H 0.231 0.769 38 H -0.173 1.173 39 H -0.171 1.171 40 H 0.115 0.885 41 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 0.713 3.547 -0.564 3.662 hybrid contribution 1.149 -1.399 0.134 1.815 sum 1.862 2.148 -0.431 2.875 Atomic orbital electron populations 1.81324 1.12408 1.07078 1.05459 1.29140 0.94775 0.94271 0.95137 1.19320 0.79599 0.99258 0.85918 1.86729 1.62985 1.66267 1.16576 1.23166 1.04806 0.95629 0.89308 1.22353 0.96537 1.00150 0.94179 0.84775 1.23119 0.88082 0.78205 0.78281 1.90737 1.39719 1.41410 1.65836 1.86402 1.43096 1.48310 1.49109 1.21551 0.86143 0.95991 0.91900 1.18771 0.93418 0.99387 0.99183 1.21043 0.96654 0.90081 0.95428 1.21841 0.96340 0.98986 1.02859 1.96850 1.34537 1.64228 1.98244 1.21138 0.89099 0.97426 0.94020 1.20708 0.99776 0.97907 1.02878 1.18893 0.85394 0.89247 0.94749 1.83116 1.24750 1.49416 1.54120 1.23864 0.87532 0.96044 0.85069 1.20864 1.00451 1.00107 1.05317 1.24348 0.95030 0.98022 0.98398 1.86599 1.43959 1.45351 1.57812 0.95683 0.82973 0.82458 0.81763 1.18234 0.84155 0.84718 0.81254 1.90761 1.78794 1.26754 1.35872 1.23688 1.04302 0.97096 0.91783 0.75954 0.85301 0.88453 0.88569 0.88472 0.82089 0.82665 0.78109 0.89788 0.76897 1.17300 1.17136 0.88455 0.86231 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.39 -0.79 18.54 42.15 0.78 -0.01 16 2 C 0.19 -0.22 14.44 -20.76 -0.30 -0.52 16 3 C 0.20 -0.72 1.84 -92.59 -0.17 -0.89 16 4 O -0.52 1.66 13.47 -35.23 -0.47 1.19 16 5 C -0.09 0.31 6.80 -25.91 -0.18 0.13 16 6 C -0.11 0.45 3.97 -90.96 -0.36 0.09 16 7 H 0.13 -0.71 8.13 -51.93 -0.42 -1.13 16 8 C 0.48 -0.86 7.48 36.01 0.27 -0.59 16 9 O -0.49 -0.46 15.65 -18.75 -0.29 -0.76 16 10 O -0.35 0.76 8.68 -39.25 -0.34 0.42 16 11 C 0.12 -0.25 5.38 36.01 0.19 -0.06 16 12 C -0.11 0.14 5.89 -104.50 -0.62 -0.48 16 13 C -0.01 0.02 9.10 -39.51 -0.36 -0.34 16 14 C -0.12 0.00 6.22 -39.50 -0.25 -0.25 16 15 Br -0.02 0.00 33.69 -68.01 -2.29 -2.29 16 16 C 0.00 0.00 9.40 -39.30 -0.37 -0.37 16 17 C -0.21 -0.30 5.89 -104.84 -0.62 -0.92 16 18 C 0.16 -0.05 6.74 -38.49 -0.26 -0.31 16 19 O -0.21 0.32 9.21 5.66 0.05 0.37 16 20 C 0.14 -0.29 9.99 29.43 0.29 0.01 16 21 C -0.26 -0.15 5.35 -104.49 -0.56 -0.71 16 22 C -0.05 0.02 2.45 36.01 0.09 0.10 16 23 O -0.53 -0.82 12.86 -35.23 -0.45 -1.27 16 24 Si 0.67 -2.04 30.02 -169.99 -5.10 -7.15 16 25 C 0.43 1.35 6.98 -34.34 -0.24 1.11 16 26 O -0.44 -2.75 16.93 4.99 0.08 -2.67 16 27 C -0.13 0.64 7.02 -25.92 -0.18 0.46 16 28 H 0.39 -2.62 9.02 45.56 0.41 -2.21 16 29 H 0.13 -0.33 7.44 -51.93 -0.39 -0.71 16 30 H 0.10 -0.38 8.08 -51.93 -0.42 -0.80 16 31 H 0.10 -0.24 8.13 -51.93 -0.42 -0.66 16 32 H 0.10 -0.26 8.13 -51.93 -0.42 -0.68 16 33 H 0.16 -0.41 6.96 -52.49 -0.37 -0.78 16 34 H 0.16 0.18 7.81 -52.48 -0.41 -0.23 16 35 H 0.20 -1.03 4.64 -52.49 -0.24 -1.27 16 36 H 0.08 -0.05 7.96 -51.93 -0.41 -0.47 16 37 H 0.38 -0.99 8.74 45.56 0.40 -0.59 16 38 H -0.25 0.15 7.11 56.52 0.40 0.55 16 39 H -0.25 0.32 6.91 56.52 0.39 0.72 16 40 H 0.10 -0.57 8.08 -51.93 -0.42 -0.99 16 41 H 0.12 -0.62 8.10 -51.93 -0.42 -1.04 16 LS Contribution 389.24 15.07 5.87 5.87 Total: 0.00 -11.62 389.24 -8.53 -20.14 By element: Atomic # 1 Polarization: -7.56 SS G_CDS: -2.74 Total: -10.31 kcal Atomic # 6 Polarization: 0.08 SS G_CDS: -3.61 Total: -3.53 kcal Atomic # 7 Polarization: -0.79 SS G_CDS: 0.78 Total: -0.01 kcal Atomic # 8 Polarization: -1.30 SS G_CDS: -1.42 Total: -2.72 kcal Atomic # 14 Polarization: -2.04 SS G_CDS: -5.10 Total: -7.15 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -2.29 Total: -2.29 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -11.62 -8.53 -20.14 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_14580220_484008.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.470 kcal (2) G-P(sol) polarization free energy of solvation -11.618 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.087 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.143 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds