Wall clock time and date at job start Sat Mar 6 2021 04:33:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 O 1.42899 * 112.90489 * 99.16370 * 3 2 1 5 5 C 1.53787 * 113.61043 * 230.40889 * 3 2 1 6 6 C 1.53784 * 87.07923 * 89.12069 * 5 3 2 7 7 H 1.09000 * 113.61578 * 270.88484 * 6 5 3 8 8 C 1.50701 * 113.61605 * 139.97671 * 6 5 3 9 9 O 1.20826 * 119.99632 * 0.02562 * 8 6 5 10 10 O 1.34226 * 120.00175 * 179.97438 * 8 6 5 11 11 C 1.45202 * 117.00062 * 180.02562 * 10 8 6 12 12 C 1.50700 * 109.47080 * 180.02562 * 11 10 8 13 13 C 1.37825 * 120.03707 * 359.71962 * 12 11 10 14 14 C 1.38843 * 120.69738 * 179.67797 * 13 12 11 15 15 Br 1.89097 * 119.86185 * 180.30370 * 14 13 12 16 16 C 1.37853 * 120.27514 * 0.62766 * 14 13 12 17 17 C 1.39380 * 119.52557 * 359.67720 * 16 14 13 18 18 C 1.38978 * 120.03992 * 180.02562 * 12 11 10 19 19 O 1.34886 * 120.98359 * 359.97240 * 18 12 11 20 20 C 1.33706 * 122.41158 * 179.97438 * 19 18 12 21 21 C 1.34543 * 122.85289 * 0.04512 * 20 19 18 22 22 C 1.50701 * 120.20272 * 179.97438 * 21 20 19 23 23 O 1.42904 * 109.47139 * 249.97584 * 22 21 20 24 24 Si 1.86299 * 109.47468 * 9.97750 * 22 21 20 25 25 C 1.41994 * 119.58976 * 359.97438 * 21 20 19 26 26 O 1.21921 * 121.40984 * 179.97438 * 25 21 20 27 27 C 1.53778 * 113.61868 * 327.90539 * 3 2 1 28 28 H 0.96698 * 114.00160 * 311.24298 * 4 3 2 29 29 H 1.09004 * 113.61202 * 203.66822 * 5 3 2 30 30 H 1.08994 * 113.61447 * 334.57253 * 5 3 2 31 31 H 1.08998 * 109.46497 * 300.00228 * 11 10 8 32 32 H 1.09004 * 109.46911 * 59.99875 * 11 10 8 33 33 H 1.07997 * 119.65233 * 0.02562 * 13 12 11 34 34 H 1.08004 * 120.23560 * 179.65787 * 16 14 13 35 35 H 1.07997 * 118.57674 * 179.97438 * 20 19 18 36 36 H 1.09000 * 109.46660 * 129.98226 * 22 21 20 37 37 H 0.96694 * 113.99951 * 180.02562 * 23 22 21 38 38 H 1.48498 * 110.00010 * 178.67997 * 24 22 21 39 39 H 1.48503 * 109.99830 * 300.00175 * 24 22 21 40 40 H 1.08999 * 113.61111 * 25.43877 * 27 3 2 41 41 H 1.08999 * 113.61280 * 156.25260 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 8 3.1641 0.2105 -1.2995 5 6 3.2235 0.8990 1.0859 6 6 3.1711 -0.3242 2.0165 7 1 2.2350 -0.4136 2.5678 8 6 4.3861 -0.4656 2.8968 9 8 5.2808 0.3434 2.8260 10 8 4.4740 -1.4897 3.7600 11 6 5.6725 -1.5625 4.5766 12 6 5.5942 -2.7684 5.4771 13 6 4.4894 -3.5912 5.4338 14 6 4.4059 -4.7094 6.2525 15 35 2.8828 -5.8269 6.1676 16 6 5.4257 -5.0047 7.1318 17 6 6.5451 -4.1762 7.1886 18 6 6.6332 -3.0485 6.3566 19 8 7.7218 -2.2546 6.4206 20 6 8.7372 -2.4968 7.2561 21 6 8.7564 -3.5475 8.0963 22 6 9.9329 -3.7639 9.0129 23 8 10.6670 -4.9120 8.5827 24 14 11.0397 -2.2660 8.9669 25 6 7.6612 -4.4511 8.1141 26 8 7.6441 -5.4141 8.8617 27 6 3.2246 -1.1927 0.7486 28 1 2.7810 -0.3516 -1.9868 29 1 4.2364 1.2299 0.8563 30 1 2.5716 1.7143 1.3993 31 1 6.5469 -1.6473 3.9314 32 1 5.7544 -0.6604 5.1829 33 1 3.6825 -3.3669 4.7519 34 1 5.3576 -5.8716 7.7723 35 1 9.5791 -1.8204 7.2557 36 1 9.5763 -3.9211 10.0308 37 1 11.4398 -5.1118 9.1284 38 1 12.1871 -2.4538 9.8908 39 1 11.5325 -2.0409 7.5843 40 1 2.5736 -2.0659 0.7897 41 1 4.2373 -1.4345 0.4258 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_14580220_484008.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:33:04 Heat of formation + Delta-G solvation = -100.253946 kcal Electronic energy + Delta-G solvation = -32698.445907 eV Core-core repulsion = 27752.841522 eV Total energy + Delta-G solvation = -4945.604384 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 436.013 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -43.32231 -42.11071 -40.59762 -40.14043 -39.73171 -37.95950 -37.66834 -37.09041 -36.11340 -34.71980 -33.71259 -33.15940 -30.71821 -29.05986 -27.49227 -27.47840 -27.02296 -25.84228 -24.35063 -23.80215 -22.38644 -21.62674 -20.63932 -19.80244 -19.49794 -18.77035 -18.69265 -18.49017 -17.87542 -17.74790 -17.38105 -16.91461 -16.65320 -16.43425 -16.20086 -15.96893 -15.77996 -15.58284 -15.52161 -15.36925 -15.15178 -14.81547 -14.68016 -14.42058 -14.19356 -14.05285 -13.92381 -13.79904 -13.44393 -13.40644 -13.15606 -12.93952 -12.81540 -12.60931 -12.40650 -12.24682 -12.12943 -11.97159 -11.78651 -11.51565 -11.48479 -11.18154 -11.12611 -10.67433 -10.48829 -10.39665 -9.56519 -4.99390 -0.83336 -0.68534 0.04960 0.35640 0.98118 1.08545 1.17220 1.32293 1.41577 1.44058 1.47473 1.54638 1.90127 2.27854 2.42487 2.68638 2.85177 3.04430 3.14468 3.15125 3.32144 3.35189 3.49674 3.56889 3.64890 3.74526 3.84423 3.87640 4.00451 4.11461 4.14436 4.20678 4.24020 4.34766 4.56880 4.59934 4.63711 4.66752 4.67502 4.78543 4.80511 4.88489 5.05003 5.08833 5.32343 5.76070 6.26800 6.31525 6.53263 6.58991 6.65308 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.444 5.444 2 C 0.218 3.782 3 C 0.208 3.792 4 O -0.533 6.533 5 C -0.095 4.095 6 C -0.110 4.110 7 H 0.150 0.850 8 C 0.486 3.514 9 O -0.520 6.520 10 O -0.350 6.350 11 C 0.116 3.884 12 C -0.095 4.095 13 C -0.007 4.007 14 C -0.121 4.121 15 Br -0.026 7.026 16 C -0.009 4.009 17 C -0.227 4.227 18 C 0.164 3.836 19 O -0.199 6.199 20 C 0.171 3.829 21 C -0.298 4.298 22 C -0.076 4.076 23 O -0.561 6.561 24 Si 0.782 3.218 25 C 0.424 3.576 26 O -0.496 6.496 27 C -0.118 4.118 28 H 0.405 0.595 29 H 0.121 0.879 30 H 0.100 0.900 31 H 0.104 0.896 32 H 0.106 0.894 33 H 0.179 0.821 34 H 0.144 0.856 35 H 0.239 0.761 36 H 0.074 0.926 37 H 0.395 0.605 38 H -0.283 1.283 39 H -0.257 1.257 40 H 0.112 0.888 41 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.433 5.053 -1.731 5.869 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.122 5.122 2 C -0.101 4.101 3 C 0.163 3.837 4 O -0.340 6.340 5 C -0.133 4.133 6 C -0.129 4.129 7 H 0.168 0.832 8 C 0.330 3.670 9 O -0.408 6.408 10 O -0.266 6.266 11 C 0.043 3.957 12 C -0.097 4.097 13 C -0.026 4.026 14 C -0.200 4.200 15 Br 0.060 6.940 16 C -0.029 4.029 17 C -0.229 4.229 18 C 0.119 3.881 19 O -0.102 6.102 20 C 0.105 3.895 21 C -0.301 4.301 22 C -0.182 4.182 23 O -0.371 6.371 24 Si 0.682 3.318 25 C 0.310 3.690 26 O -0.380 6.380 27 C -0.157 4.157 28 H 0.257 0.743 29 H 0.139 0.861 30 H 0.119 0.881 31 H 0.122 0.878 32 H 0.124 0.876 33 H 0.197 0.803 34 H 0.162 0.838 35 H 0.255 0.745 36 H 0.093 0.907 37 H 0.245 0.755 38 H -0.210 1.210 39 H -0.184 1.184 40 H 0.130 0.870 41 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 1.106 5.261 -1.865 5.690 hybrid contribution 1.017 -1.937 0.499 2.244 sum 2.124 3.324 -1.365 4.174 Atomic orbital electron populations 1.81356 1.14194 1.09192 1.07466 1.29497 0.94964 0.92380 0.93248 1.19375 0.78005 1.00238 0.86111 1.86710 1.63111 1.67072 1.17082 1.23189 1.04420 0.96118 0.89597 1.22447 0.96195 1.00062 0.94193 0.83235 1.23461 0.88121 0.77543 0.77907 1.90733 1.40895 1.42424 1.66731 1.86398 1.42995 1.48208 1.49009 1.21612 0.86472 0.95608 0.92004 1.18857 0.92736 0.99462 0.98630 1.21257 0.97076 0.89269 0.94983 1.21864 0.95916 0.99403 1.02855 1.96845 1.34409 1.64551 1.98225 1.21102 0.89763 0.97471 0.94603 1.20707 0.99658 0.99019 1.03542 1.18917 0.85989 0.88741 0.94501 1.83168 1.24446 1.48745 1.53806 1.24389 0.87381 0.94960 0.82740 1.20952 1.00485 1.01122 1.07510 1.24957 0.95909 0.99593 0.97745 1.86546 1.44916 1.46985 1.58618 0.94478 0.79011 0.79302 0.78990 1.18768 0.85186 0.84408 0.80608 1.90723 1.80036 1.28979 1.38229 1.23687 1.04801 0.96849 0.90371 0.74273 0.86050 0.88141 0.87821 0.87594 0.80338 0.83825 0.74549 0.90747 0.75492 1.20966 1.18361 0.86957 0.85560 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -1.86 18.54 20.01 0.37 -1.49 16 2 C 0.22 -0.65 14.44 89.44 1.29 0.65 16 3 C 0.21 -1.73 1.84 -12.07 -0.02 -1.75 16 4 O -0.53 4.00 13.47 -148.98 -2.01 2.00 16 5 C -0.09 0.74 6.80 31.12 0.21 0.95 16 6 C -0.11 1.06 3.97 -11.01 -0.04 1.02 16 7 H 0.15 -1.88 8.13 -2.39 -0.02 -1.90 16 8 C 0.49 -2.53 7.48 71.24 0.53 -1.99 16 9 O -0.52 -0.36 15.65 21.96 0.34 -0.02 16 10 O -0.35 2.19 8.68 -51.38 -0.45 1.74 16 11 C 0.12 -0.72 5.38 71.24 0.38 -0.33 16 12 C -0.10 0.35 5.89 -19.78 -0.12 0.24 16 13 C -0.01 0.02 9.10 22.32 0.20 0.22 16 14 C -0.12 -0.06 6.22 22.32 0.14 0.08 16 15 Br -0.03 -0.02 33.69 -20.37 -0.69 -0.70 16 16 C -0.01 -0.04 9.40 22.45 0.21 0.17 16 17 C -0.23 -0.98 5.89 -20.01 -0.12 -1.10 16 18 C 0.16 -0.15 6.74 22.98 0.15 0.00 16 19 O -0.20 0.89 9.21 -2.68 -0.02 0.86 16 20 C 0.17 -0.90 9.99 66.97 0.67 -0.23 16 21 C -0.30 -0.60 5.35 -19.78 -0.11 -0.71 16 22 C -0.08 -0.04 2.45 71.24 0.17 0.14 16 23 O -0.56 -2.77 12.86 -148.98 -1.92 -4.68 16 24 Si 0.78 -5.69 30.02 68.60 2.06 -3.63 16 25 C 0.42 3.67 6.98 25.67 0.18 3.85 16 26 O -0.50 -8.13 16.93 -5.06 -0.09 -8.22 16 27 C -0.12 1.40 7.02 31.12 0.22 1.62 16 28 H 0.40 -5.88 9.02 -74.06 -0.67 -6.55 16 29 H 0.12 -0.69 7.44 -2.39 -0.02 -0.71 16 30 H 0.10 -0.85 8.08 -2.39 -0.02 -0.87 16 31 H 0.10 -0.73 8.13 -2.39 -0.02 -0.75 16 32 H 0.11 -0.78 8.13 -2.39 -0.02 -0.80 16 33 H 0.18 -1.23 6.96 -2.91 -0.02 -1.25 16 34 H 0.14 0.81 7.81 -2.91 -0.02 0.79 16 35 H 0.24 -3.09 4.64 -2.91 -0.01 -3.11 16 36 H 0.07 0.08 7.96 -2.39 -0.02 0.06 16 37 H 0.39 -1.30 8.74 -74.06 -0.65 -1.94 16 38 H -0.28 0.44 7.11 99.48 0.71 1.15 16 39 H -0.26 1.35 6.91 99.48 0.69 2.04 16 40 H 0.11 -1.61 8.08 -2.39 -0.02 -1.62 16 41 H 0.13 -1.58 8.10 -2.39 -0.02 -1.60 16 Total: 0.00 -29.81 389.24 1.44 -28.37 By element: Atomic # 1 Polarization: -16.94 SS G_CDS: -0.13 Total: -17.07 kcal Atomic # 6 Polarization: -1.13 SS G_CDS: 3.96 Total: 2.83 kcal Atomic # 7 Polarization: -1.86 SS G_CDS: 0.37 Total: -1.49 kcal Atomic # 8 Polarization: -4.18 SS G_CDS: -4.13 Total: -8.31 kcal Atomic # 14 Polarization: -5.69 SS G_CDS: 2.06 Total: -3.63 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -0.69 Total: -0.70 kcal Total: -29.81 1.44 -28.37 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_14580220_484008.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.884 kcal (2) G-P(sol) polarization free energy of solvation -29.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.695 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.441 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.370 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.254 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds