Wall clock time and date at job start Sat Mar 6 2021 04:53:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52998 * 109.47058 * 2 1 4 4 C 1.52997 * 109.47202 * 239.99609 * 2 1 3 5 5 O 1.42899 * 109.46921 * 119.99649 * 2 1 3 6 6 C 1.42903 * 114.00376 * 59.99804 * 5 2 1 7 7 H 1.09000 * 112.84762 * 341.20304 * 6 5 2 8 8 C 1.53780 * 113.61138 * 112.50068 * 6 5 2 9 9 C 1.53778 * 87.07975 * 139.98763 * 8 6 5 10 10 H 1.08997 * 113.69387 * 89.13085 * 9 8 6 11 11 C 1.50705 * 113.61543 * 220.01908 * 9 8 6 12 12 O 1.20827 * 119.99824 * 97.49450 * 11 9 8 13 13 O 1.34231 * 119.99824 * 277.49841 * 11 9 8 14 14 C 1.45205 * 116.99853 * 179.97438 * 13 11 9 15 15 C 1.50699 * 109.47230 * 179.97438 * 14 13 11 16 16 C 1.38937 * 120.04213 * 180.02562 * 15 14 13 17 17 O 1.34880 * 120.98319 * 0.02562 * 16 15 14 18 18 C 1.33719 * 122.40728 * 180.02562 * 17 16 15 19 19 C 1.34542 * 122.85813 * 359.94833 * 18 17 16 20 20 C 1.50693 * 120.20593 * 180.02562 * 19 18 17 21 21 O 1.42896 * 109.47498 * 249.97839 * 20 19 18 22 22 Si 1.86300 * 109.47048 * 9.97956 * 20 19 18 23 23 C 1.42002 * 119.59248 * 0.02674 * 19 18 17 24 24 O 1.21917 * 121.40627 * 179.97438 * 23 19 18 25 25 C 1.40453 * 119.33653 * 179.97438 * 16 15 14 26 26 C 1.39343 * 120.23848 * 359.97438 * 25 16 15 27 27 C 1.37887 * 119.52970 * 359.79013 * 26 25 16 28 28 Br 1.89097 * 119.86551 * 180.22682 * 27 26 25 29 29 C 1.37874 * 120.03797 * 0.02562 * 15 14 13 30 30 C 1.53769 * 113.61915 * 209.99838 * 6 5 2 31 31 H 1.09002 * 109.47000 * 300.00246 * 1 2 3 32 32 H 1.08995 * 109.47268 * 60.00739 * 1 2 3 33 33 H 1.09002 * 109.47312 * 180.02562 * 1 2 3 34 34 H 1.08996 * 109.47312 * 180.02562 * 3 2 1 35 35 H 1.09007 * 109.46780 * 299.99578 * 3 2 1 36 36 H 1.09002 * 109.47555 * 59.99471 * 3 2 1 37 37 H 1.09002 * 109.47015 * 300.00216 * 4 2 1 38 38 H 1.08995 * 109.47292 * 59.99667 * 4 2 1 39 39 H 1.09002 * 109.46964 * 180.02562 * 4 2 1 40 40 H 1.09003 * 113.61894 * 25.43691 * 8 6 5 41 41 H 1.09005 * 113.61587 * 254.53483 * 8 6 5 42 42 H 1.09005 * 109.46510 * 60.00068 * 14 13 11 43 43 H 1.08998 * 109.47267 * 300.00162 * 14 13 11 44 44 H 1.07997 * 118.57760 * 179.97438 * 18 17 16 45 45 H 1.09005 * 109.46958 * 129.97871 * 20 19 18 46 46 H 0.96701 * 114.00602 * 179.97438 * 21 20 19 47 47 H 1.48495 * 110.00309 * 178.67756 * 22 20 19 48 48 H 1.48501 * 110.00206 * 299.99994 * 22 20 19 49 49 H 1.08003 * 120.23495 * 179.97438 * 26 25 16 50 50 H 1.08002 * 119.64703 * 359.97438 * 29 15 14 51 51 H 1.09002 * 113.61517 * 105.46694 * 30 6 5 52 52 H 1.09002 * 113.61807 * 334.57181 * 30 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0063 -0.6736 1.1668 6 6 1.5846 -2.0355 1.2647 7 1 0.7236 -2.2582 0.6346 8 6 2.7334 -3.0477 1.1216 9 6 2.0561 -3.8556 2.2412 10 1 1.3245 -4.5778 1.8791 11 6 3.0270 -4.4509 3.2281 12 8 3.2483 -3.8866 4.2733 13 8 3.6460 -5.6081 2.9459 14 6 4.5684 -6.1224 3.9424 15 6 5.1625 -7.4189 3.4555 16 6 6.0790 -8.1036 4.2438 17 8 6.4513 -7.6263 5.4492 18 6 7.3311 -8.2612 6.2308 19 6 7.9131 -9.4227 5.8810 20 6 8.8968 -10.0874 6.8091 21 8 10.2101 -10.0011 6.2525 22 14 8.8659 -9.2313 8.4634 23 6 7.5948 -10.0183 4.6318 24 8 8.1029 -11.0697 4.2815 25 6 6.6230 -9.3109 3.7757 26 6 6.2454 -9.8154 2.5329 27 6 5.3307 -9.1232 1.7678 28 35 4.8067 -9.8026 0.0826 29 6 4.7971 -7.9271 2.2270 30 6 1.4332 -2.5310 2.7125 31 1 -0.3633 0.5139 0.8900 32 1 -0.3633 0.5137 -0.8900 33 1 -0.3634 -1.0277 0.0005 34 1 3.1299 1.4425 -0.0005 35 1 1.6766 1.9563 -0.8901 36 1 1.6766 1.9564 0.8899 37 1 1.6766 -1.7490 -1.2491 38 1 1.6767 -0.2076 -2.1392 39 1 3.1300 -0.7217 -1.2489 40 1 3.7072 -2.6456 1.4011 41 1 2.7463 -3.5605 0.1597 42 1 4.0342 -6.2961 4.8766 43 1 5.3649 -5.3972 4.1088 44 1 7.5852 -7.8229 7.1846 45 1 8.6246 -11.1352 6.9370 46 1 10.8962 -10.4092 6.7982 47 1 9.8085 -9.8973 9.3978 48 1 9.2352 -7.8019 8.3026 49 1 6.6641 -10.7436 2.1727 50 1 4.0839 -7.3915 1.6180 51 1 0.3964 -2.6264 3.0352 52 1 2.0514 -1.9875 3.4270 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_14652030_484008.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:53:35 Heat of formation + Delta-G solvation = -137.302466 kcal Electronic energy + Delta-G solvation = -38042.557564 eV Core-core repulsion = 32795.074351 eV Total energy + Delta-G solvation = -5247.483213 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 467.080 amu Computer time = 1.74 seconds Orbital eigenvalues (eV) -43.35478 -41.98571 -40.55498 -40.16901 -39.81695 -38.31086 -37.92924 -37.33497 -34.75216 -33.85721 -33.70700 -33.18293 -30.74230 -28.99608 -28.36108 -28.29624 -27.50276 -26.95539 -26.65650 -25.79242 -24.36514 -22.95115 -22.30060 -21.01768 -20.69846 -20.46719 -19.61051 -18.91049 -18.73476 -18.51750 -17.96560 -17.85512 -17.39363 -17.33901 -16.81781 -16.52943 -16.35552 -16.16973 -15.87362 -15.80390 -15.59307 -15.54999 -15.39141 -14.99162 -14.83671 -14.48540 -14.36101 -14.30280 -13.99169 -13.94356 -13.81990 -13.51123 -13.30637 -13.27493 -12.98564 -12.95717 -12.79853 -12.69157 -12.63246 -12.40761 -12.33836 -12.27694 -12.15154 -11.99795 -11.82429 -11.62786 -11.51453 -11.44003 -11.22217 -11.18790 -10.70262 -10.51098 -10.43087 -10.36953 -9.59461 -5.01869 -0.86471 -0.71526 0.01768 0.33050 0.95227 1.07276 1.14725 1.36177 1.38664 1.52258 1.87449 2.24882 2.64801 2.75206 2.87355 3.10296 3.28627 3.29965 3.44415 3.47630 3.60792 3.71464 3.71624 3.79669 3.83673 3.94765 3.95768 3.96840 4.01125 4.08206 4.11879 4.14404 4.20846 4.30310 4.33392 4.57180 4.60676 4.63962 4.67653 4.68158 4.70856 4.74904 4.77194 4.82705 4.85742 4.94107 4.95534 5.00424 5.02003 5.03686 5.17020 5.26121 5.29388 5.38177 5.39821 5.73163 6.28588 6.44053 6.51693 6.62407 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.098 3.902 3 C -0.141 4.141 4 C -0.174 4.174 5 O -0.382 6.382 6 C 0.063 3.937 7 H 0.118 0.882 8 C -0.134 4.134 9 C -0.102 4.102 10 H 0.162 0.838 11 C 0.479 3.521 12 O -0.531 6.531 13 O -0.349 6.349 14 C 0.116 3.884 15 C -0.097 4.097 16 C 0.164 3.836 17 O -0.202 6.202 18 C 0.169 3.831 19 C -0.297 4.297 20 C -0.075 4.075 21 O -0.560 6.560 22 Si 0.780 3.220 23 C 0.425 3.575 24 O -0.494 6.494 25 C -0.226 4.226 26 C -0.007 4.007 27 C -0.120 4.120 28 Br -0.022 7.022 29 C -0.006 4.006 30 C -0.123 4.123 31 H 0.057 0.943 32 H 0.076 0.924 33 H 0.070 0.930 34 H 0.055 0.945 35 H 0.084 0.916 36 H 0.056 0.944 37 H 0.069 0.931 38 H 0.074 0.926 39 H 0.056 0.944 40 H 0.077 0.923 41 H 0.105 0.895 42 H 0.105 0.895 43 H 0.096 0.904 44 H 0.238 0.762 45 H 0.076 0.924 46 H 0.395 0.605 47 H -0.281 1.281 48 H -0.260 1.260 49 H 0.147 0.853 50 H 0.178 0.822 51 H 0.097 0.903 52 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.439 3.239 0.523 7.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.059 3.941 3 C -0.199 4.199 4 C -0.232 4.232 5 O -0.302 6.302 6 C 0.005 3.995 7 H 0.136 0.864 8 C -0.172 4.172 9 C -0.120 4.120 10 H 0.179 0.821 11 C 0.324 3.676 12 O -0.419 6.419 13 O -0.265 6.265 14 C 0.042 3.958 15 C -0.099 4.099 16 C 0.118 3.882 17 O -0.104 6.104 18 C 0.103 3.897 19 C -0.300 4.300 20 C -0.181 4.181 21 O -0.371 6.371 22 Si 0.681 3.319 23 C 0.311 3.689 24 O -0.377 6.377 25 C -0.229 4.229 26 C -0.027 4.027 27 C -0.200 4.200 28 Br 0.063 6.937 29 C -0.025 4.025 30 C -0.160 4.160 31 H 0.076 0.924 32 H 0.095 0.905 33 H 0.089 0.911 34 H 0.074 0.926 35 H 0.103 0.897 36 H 0.075 0.925 37 H 0.088 0.912 38 H 0.093 0.907 39 H 0.075 0.925 40 H 0.096 0.904 41 H 0.123 0.877 42 H 0.122 0.878 43 H 0.114 0.886 44 H 0.254 0.746 45 H 0.095 0.905 46 H 0.246 0.754 47 H -0.207 1.207 48 H -0.186 1.186 49 H 0.164 0.836 50 H 0.196 0.804 51 H 0.115 0.885 52 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -6.139 3.621 0.329 7.135 hybrid contribution 1.849 -1.054 -0.023 2.129 sum -4.289 2.567 0.306 5.008 Atomic orbital electron populations 1.22455 0.94705 1.03147 1.03142 1.21695 0.93863 0.93142 0.85402 1.21807 1.01531 0.93629 1.02896 1.22453 1.01784 1.01349 0.97577 1.88048 1.74204 1.24150 1.43802 1.23666 0.97358 0.81365 0.97097 0.86421 1.23491 0.99161 0.95985 0.98548 1.22431 0.97027 0.97328 0.95261 0.82068 1.23922 0.79363 0.77656 0.86702 1.90705 1.62607 1.61248 1.27341 1.86408 1.54271 1.38349 1.47516 1.21565 0.92394 0.91274 0.90521 1.18834 0.98798 0.97588 0.94652 1.18916 0.94035 0.91549 0.83723 1.83172 1.53093 1.48436 1.25723 1.24392 0.82907 0.88903 0.93467 1.20964 1.07675 1.00799 1.00517 1.24936 0.82272 1.05217 1.05676 1.86546 1.17134 1.82295 1.51085 0.94481 0.89709 0.76842 0.70915 1.18738 0.79281 0.84783 0.86080 1.90720 1.49447 1.22682 1.74864 1.20710 1.04914 0.98086 0.99156 1.21120 0.92162 0.98691 0.90774 1.21856 1.03283 0.99115 0.95736 1.96838 1.90571 1.86239 1.20018 1.21246 0.95903 0.91879 0.93490 1.23238 1.02595 0.92917 0.97255 0.92415 0.90495 0.91147 0.92599 0.89746 0.92523 0.91214 0.90696 0.92525 0.90436 0.87687 0.87753 0.88581 0.74647 0.90549 0.75443 1.20688 1.18647 0.83562 0.80440 0.88488 0.90255 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.73 8.38 71.98 0.60 1.33 16 2 C 0.10 -0.16 1.11 -10.80 -0.01 -0.17 16 3 C -0.14 0.16 8.84 71.98 0.64 0.80 16 4 C -0.17 0.71 8.38 71.98 0.60 1.32 16 5 O -0.38 -0.78 10.00 -148.98 -1.49 -2.27 16 6 C 0.06 -0.22 2.82 31.12 0.09 -0.13 16 7 H 0.12 -0.91 5.54 -2.39 -0.01 -0.93 16 8 C -0.13 0.62 7.46 31.12 0.23 0.85 16 9 C -0.10 0.52 4.26 -11.01 -0.05 0.47 16 10 H 0.16 -1.83 8.14 -2.39 -0.02 -1.85 16 11 C 0.48 0.19 7.48 71.24 0.53 0.73 16 12 O -0.53 -3.83 15.65 21.96 0.34 -3.49 16 13 O -0.35 0.66 8.68 -51.42 -0.45 0.22 16 14 C 0.12 -0.26 5.38 71.24 0.38 0.12 16 15 C -0.10 0.11 5.89 -19.78 -0.12 -0.01 16 16 C 0.16 0.19 6.74 22.98 0.15 0.34 16 17 O -0.20 0.44 9.21 -2.73 -0.03 0.41 16 18 C 0.17 -0.59 9.99 66.97 0.67 0.08 16 19 C -0.30 -0.97 5.35 -19.78 -0.11 -1.07 16 20 C -0.08 -0.10 2.45 71.23 0.17 0.07 16 21 O -0.56 -3.23 12.86 -148.98 -1.92 -5.14 16 22 Si 0.78 -4.83 30.01 68.60 2.06 -2.77 16 23 C 0.42 4.11 6.98 25.67 0.18 4.29 16 24 O -0.49 -8.39 16.93 -5.04 -0.09 -8.47 16 25 C -0.23 -1.27 5.89 -20.01 -0.12 -1.39 16 26 C -0.01 -0.04 9.40 22.45 0.21 0.17 16 27 C -0.12 -0.20 6.22 22.32 0.14 -0.06 16 28 Br -0.02 -0.03 33.69 -20.37 -0.69 -0.71 16 29 C -0.01 0.01 9.10 22.32 0.20 0.21 16 30 C -0.12 0.27 7.24 31.12 0.23 0.49 16 31 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 32 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 33 H 0.07 -0.44 6.24 -2.39 -0.01 -0.46 16 34 H 0.05 0.02 8.14 -2.39 -0.02 0.00 16 35 H 0.08 -0.35 8.14 -2.38 -0.02 -0.37 16 36 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 37 H 0.07 -0.43 7.02 -2.39 -0.02 -0.45 16 38 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 39 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 40 H 0.08 -0.03 8.09 -2.39 -0.02 -0.05 16 41 H 0.10 -0.89 8.14 -2.38 -0.02 -0.91 16 42 H 0.10 -0.37 8.13 -2.38 -0.02 -0.39 16 43 H 0.10 -0.21 8.13 -2.39 -0.02 -0.23 16 44 H 0.24 -2.65 4.64 -2.91 -0.01 -2.66 16 45 H 0.08 0.13 7.96 -2.38 -0.02 0.11 16 46 H 0.40 -1.03 8.74 -74.06 -0.65 -1.68 16 47 H -0.28 0.24 7.11 99.48 0.71 0.95 16 48 H -0.26 0.98 6.91 99.48 0.69 1.67 16 49 H 0.15 0.90 7.81 -2.91 -0.02 0.88 16 50 H 0.18 -0.84 6.96 -2.91 -0.02 -0.86 16 51 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 52 H 0.08 0.31 7.43 -2.39 -0.02 0.29 16 Total: 0.00 -25.16 448.54 2.75 -22.41 By element: Atomic # 1 Polarization: -8.98 SS G_CDS: 0.36 Total: -8.62 kcal Atomic # 6 Polarization: 3.80 SS G_CDS: 4.64 Total: 8.44 kcal Atomic # 8 Polarization: -15.13 SS G_CDS: -3.62 Total: -18.74 kcal Atomic # 14 Polarization: -4.83 SS G_CDS: 2.06 Total: -2.77 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -0.69 Total: -0.71 kcal Total: -25.16 2.75 -22.41 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_14652030_484008.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.891 kcal (2) G-P(sol) polarization free energy of solvation -25.159 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.748 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.302 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.75 seconds