Wall clock time and date at job start Sat Mar 6 2021 06:37:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86292 * 109.47183 * 2 1 4 4 C 1.50704 * 109.47130 * 120.00302 * 2 1 3 5 5 C 1.34530 * 120.20255 * 249.99847 * 4 2 1 6 6 O 1.33714 * 122.86571 * 180.02562 * 5 4 2 7 7 C 1.34889 * 122.40397 * 359.97438 * 6 5 4 8 8 C 1.38936 * 120.99007 * 179.97438 * 7 6 5 9 9 C 1.50704 * 120.04065 * 0.02562 * 8 7 6 10 10 O 1.45203 * 109.46795 * 180.02562 * 9 8 7 11 11 C 1.34227 * 116.99796 * 180.02562 * 10 9 8 12 12 O 1.20827 * 120.00038 * 0.02562 * 11 10 9 13 13 C 1.50701 * 120.00254 * 180.02562 * 11 10 9 14 14 H 1.09001 * 112.90356 * 48.74559 * 13 11 10 15 15 C 1.53773 * 113.61764 * 180.02562 * 13 11 10 16 16 C 1.53781 * 87.08257 * 139.98018 * 15 13 11 17 17 H 1.08999 * 113.61127 * 89.20266 * 16 15 13 18 18 C 1.50700 * 113.61244 * 220.01567 * 16 15 13 19 19 C 1.38235 * 120.00273 * 239.99701 * 18 16 15 20 20 C 1.38234 * 120.00220 * 179.97438 * 19 18 16 21 21 C 1.38233 * 120.00037 * 0.28719 * 20 19 18 22 22 C 1.38238 * 119.99747 * 359.50225 * 21 20 19 23 23 C 1.38234 * 120.00083 * 0.44989 * 22 21 20 24 24 C 1.53776 * 87.07857 * 334.56716 * 16 15 13 25 25 C 1.37872 * 119.91723 * 180.30549 * 8 7 6 26 26 C 1.38786 * 120.70291 * 359.48452 * 25 8 7 27 27 Br 1.89097 * 119.86363 * 180.28299 * 26 25 8 28 28 C 1.37895 * 120.27538 * 0.51289 * 26 25 8 29 29 C 1.39336 * 119.52447 * 359.75026 * 28 26 25 30 30 C 1.41995 * 120.20285 * 69.97503 * 4 2 1 31 31 O 1.21914 * 121.41083 * 0.02562 * 30 4 2 32 32 H 0.96703 * 114.00318 * 59.99436 * 1 2 3 33 33 H 1.09004 * 109.46856 * 239.99889 * 2 1 3 34 34 H 1.48498 * 110.00012 * 60.00302 * 3 2 1 35 35 H 1.48505 * 110.00080 * 181.32236 * 3 2 1 36 36 H 1.08007 * 118.56772 * 359.97438 * 5 4 2 37 37 H 1.09001 * 109.47013 * 60.00841 * 9 8 7 38 38 H 1.08996 * 109.47241 * 300.00777 * 9 8 7 39 39 H 1.09004 * 113.61287 * 25.43139 * 15 13 11 40 40 H 1.08998 * 113.69097 * 254.54292 * 15 13 11 41 41 H 1.07999 * 119.99770 * 359.97438 * 19 18 16 42 42 H 1.08002 * 119.99744 * 180.02562 * 20 19 18 43 43 H 1.07998 * 120.00395 * 179.72811 * 21 20 19 44 44 H 1.07999 * 119.99927 * 180.28388 * 22 21 20 45 45 H 1.08002 * 120.00281 * 179.83134 * 23 22 21 46 46 H 1.09007 * 113.61390 * 139.98308 * 24 16 15 47 47 H 1.09000 * 113.61458 * 270.87808 * 24 16 15 48 48 H 1.07998 * 119.64524 * 179.74015 * 25 8 7 49 49 H 1.08003 * 120.23434 * 179.76830 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 2.5319 -0.0171 2.2145 6 8 2.9976 -0.5928 3.3279 7 6 2.8999 -1.9195 3.5509 8 6 3.3947 -2.4870 4.7186 9 6 4.0520 -1.6183 5.7599 10 8 4.4815 -2.4417 6.8761 11 6 5.0895 -1.8162 7.8963 12 8 5.2569 -0.6202 7.8581 13 6 5.5634 -2.6056 9.0894 14 1 6.1392 -3.4886 8.8123 15 6 6.2377 -1.7440 10.1699 16 6 5.5066 -2.6123 11.2073 17 1 6.0680 -3.4961 11.5103 18 6 4.9695 -1.8303 12.3782 19 6 5.3984 -2.1222 13.6595 20 6 4.9061 -1.4045 14.7335 21 6 3.9805 -0.3988 14.5268 22 6 3.5549 -0.1040 13.2451 23 6 4.0479 -0.8210 12.1710 24 6 4.4568 -2.8904 10.1185 25 6 3.2887 -3.8467 4.9209 26 6 2.6816 -4.6589 3.9733 27 35 2.5419 -6.5198 4.2788 28 6 2.1841 -4.1152 2.8078 29 6 2.2904 -2.7431 2.5901 30 6 1.7733 -2.1158 1.3584 31 8 1.2342 -2.7765 0.4871 32 1 -0.3934 0.4418 -0.7650 33 1 1.7923 -0.5139 -0.8900 34 1 1.5616 2.4678 1.2085 35 1 3.5346 1.7702 -0.0322 36 1 2.6434 1.0511 2.0999 37 1 3.3405 -0.8713 6.1117 38 1 4.9169 -1.1190 5.3232 39 1 5.9126 -0.7035 10.1644 40 1 7.3222 -1.8483 10.1995 41 1 6.1180 -2.9111 13.8215 42 1 5.2415 -1.6324 15.7345 43 1 3.5926 0.1590 15.3663 44 1 2.8353 0.6848 13.0831 45 1 3.7134 -0.5925 11.1698 46 1 4.1035 -3.9215 10.1058 47 1 3.6448 -2.1635 10.0991 48 1 3.6785 -4.2837 5.8283 49 1 1.7152 -4.7484 2.0691 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_15070214_484008.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:37:53 Heat of formation + Delta-G solvation = -65.847538 kcal Electronic energy + Delta-G solvation = -37183.403725 eV Core-core repulsion = 32055.871898 eV Total energy + Delta-G solvation = -5127.531827 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 471.049 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -43.35633 -42.11315 -40.75579 -40.04772 -39.81786 -38.78749 -37.77982 -37.44223 -34.70980 -33.73005 -33.17179 -32.32383 -31.80320 -30.71341 -28.87518 -27.47906 -27.28678 -26.89756 -25.85094 -24.36196 -24.02096 -23.44418 -22.42996 -21.74879 -20.67720 -20.29760 -19.64656 -19.02186 -18.60502 -18.52907 -18.08447 -17.89341 -17.46721 -17.25748 -16.70926 -16.69362 -16.44046 -16.32761 -15.97217 -15.66613 -15.58099 -15.41268 -15.22010 -15.16833 -14.91504 -14.69812 -14.50662 -14.32795 -14.18180 -14.00185 -13.87174 -13.79146 -13.62578 -13.27629 -13.02067 -12.89413 -12.68176 -12.63298 -12.38734 -12.27647 -12.14650 -11.92345 -11.83023 -11.68500 -11.68323 -11.46860 -11.30401 -11.04089 -10.69537 -10.42096 -10.36249 -9.83356 -9.60247 -9.56293 -5.25137 -0.82903 -0.69695 0.00019 0.36131 0.39656 0.48696 0.90826 1.00563 1.05048 1.32479 1.36376 1.46599 1.60875 2.31831 2.69917 2.79488 2.84437 3.00160 3.15789 3.20447 3.30240 3.42087 3.49867 3.64403 3.71273 3.73945 3.81420 3.85777 3.92031 3.95556 4.00222 4.02718 4.03738 4.09426 4.21449 4.22159 4.27528 4.36974 4.49747 4.51717 4.55393 4.59519 4.63428 4.66019 4.68514 4.78233 4.78670 4.84858 5.01580 5.06652 5.11910 5.20178 5.25337 5.55815 5.62478 5.68511 5.71281 6.07985 6.41494 6.56519 6.59267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.047 4.047 3 Si 0.680 3.320 4 C -0.262 4.262 5 C 0.132 3.868 6 O -0.212 6.212 7 C 0.161 3.839 8 C -0.105 4.105 9 C 0.117 3.883 10 O -0.353 6.353 11 C 0.475 3.525 12 O -0.499 6.499 13 C -0.111 4.111 14 H 0.130 0.870 15 C -0.110 4.110 16 C -0.071 4.071 17 H 0.107 0.893 18 C -0.074 4.074 19 C -0.114 4.114 20 C -0.118 4.118 21 C -0.122 4.122 22 C -0.117 4.117 23 C -0.116 4.116 24 C -0.115 4.115 25 C -0.011 4.011 26 C -0.120 4.120 27 Br -0.023 7.023 28 C 0.004 3.996 29 C -0.210 4.210 30 C 0.435 3.565 31 O -0.439 6.439 32 H 0.385 0.615 33 H 0.082 0.918 34 H -0.243 1.243 35 H -0.246 1.246 36 H 0.194 0.806 37 H 0.094 0.906 38 H 0.094 0.906 39 H 0.100 0.900 40 H 0.083 0.917 41 H 0.122 0.878 42 H 0.123 0.877 43 H 0.122 0.878 44 H 0.122 0.878 45 H 0.120 0.880 46 H 0.088 0.912 47 H 0.092 0.908 48 H 0.163 0.837 49 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.802 2.096 0.788 2.874 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.157 4.157 3 Si 0.580 3.420 4 C -0.265 4.265 5 C 0.067 3.933 6 O -0.116 6.116 7 C 0.116 3.884 8 C -0.107 4.107 9 C 0.043 3.957 10 O -0.270 6.270 11 C 0.318 3.682 12 O -0.385 6.385 13 C -0.130 4.130 14 H 0.148 0.852 15 C -0.147 4.147 16 C -0.089 4.089 17 H 0.125 0.875 18 C -0.074 4.074 19 C -0.132 4.132 20 C -0.136 4.136 21 C -0.140 4.140 22 C -0.135 4.135 23 C -0.134 4.134 24 C -0.152 4.152 25 C -0.031 4.031 26 C -0.200 4.200 27 Br 0.063 6.937 28 C -0.016 4.016 29 C -0.213 4.213 30 C 0.317 3.683 31 O -0.317 6.317 32 H 0.233 0.767 33 H 0.100 0.900 34 H -0.168 1.168 35 H -0.170 1.170 36 H 0.210 0.790 37 H 0.112 0.888 38 H 0.112 0.888 39 H 0.119 0.881 40 H 0.102 0.898 41 H 0.140 0.860 42 H 0.141 0.859 43 H 0.140 0.860 44 H 0.140 0.860 45 H 0.138 0.862 46 H 0.106 0.894 47 H 0.110 0.890 48 H 0.180 0.820 49 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 2.189 1.823 1.551 3.243 hybrid contribution -0.075 0.037 -0.246 0.260 sum 2.114 1.860 1.305 3.103 Atomic orbital electron populations 1.86506 1.16697 1.82021 1.49514 1.24237 0.86312 1.09243 0.95930 0.94384 0.81246 0.78147 0.88262 1.21020 1.09451 0.96639 0.99351 1.23695 0.90099 0.97311 0.82212 1.83104 1.69034 1.21473 1.37951 1.18922 0.95713 0.80121 0.93689 1.18794 1.04308 0.94074 0.93508 1.21501 0.99820 0.90949 0.83405 1.86426 1.69949 1.42359 1.28310 1.23647 0.74253 0.87414 0.82931 1.90707 1.52579 1.16073 1.79129 1.22613 1.00769 1.00555 0.89098 0.85201 1.23090 1.00621 0.99655 0.91336 1.21475 0.97297 0.98529 0.91637 0.87522 1.19601 0.97178 0.96610 0.93985 1.21069 1.00098 0.99975 0.92060 1.21191 0.97297 0.96103 0.99029 1.21211 0.97718 0.97926 0.97169 1.21176 0.99976 0.99619 0.92769 1.21016 0.97408 0.95914 0.99037 1.23079 0.96001 1.03729 0.92424 1.21055 0.92812 0.90813 0.98398 1.21843 1.07043 0.92871 0.98213 1.96845 1.97451 1.03076 1.96319 1.21137 0.92411 0.93033 0.95048 1.20700 1.07214 0.95061 0.98343 1.18194 0.77484 0.87725 0.84889 1.90757 1.34140 1.66359 1.40465 0.76749 0.90019 1.16761 1.16970 0.78996 0.88806 0.88791 0.88118 0.89847 0.85966 0.85946 0.86032 0.86010 0.86198 0.89362 0.88999 0.81995 0.82549 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.54 12.86 -35.23 -0.45 -0.99 16 2 C -0.05 -0.01 2.45 36.01 0.09 0.08 16 3 Si 0.68 -1.88 30.02 -169.99 -5.10 -6.98 16 4 C -0.26 -0.56 5.35 -104.49 -0.56 -1.12 16 5 C 0.13 0.04 9.99 29.42 0.29 0.33 16 6 O -0.21 -0.14 9.21 5.63 0.05 -0.09 16 7 C 0.16 0.22 6.74 -38.49 -0.26 -0.04 16 8 C -0.11 -0.04 5.89 -104.50 -0.62 -0.65 16 9 C 0.12 -0.02 5.38 36.01 0.19 0.18 16 10 O -0.35 0.03 8.68 -39.25 -0.34 -0.31 16 11 C 0.47 0.25 7.48 36.01 0.27 0.52 16 12 O -0.50 -1.70 15.65 -18.75 -0.29 -1.99 16 13 C -0.11 0.22 4.26 -90.96 -0.39 -0.17 16 14 H 0.13 -0.51 8.14 -51.93 -0.42 -0.93 16 15 C -0.11 0.14 6.87 -25.92 -0.18 -0.03 16 16 C -0.07 0.13 3.98 -90.96 -0.36 -0.23 16 17 H 0.11 -0.34 8.09 -51.93 -0.42 -0.76 16 18 C -0.07 -0.01 5.29 -104.62 -0.55 -0.56 16 19 C -0.11 -0.02 9.71 -39.58 -0.38 -0.40 16 20 C -0.12 -0.05 10.05 -39.58 -0.40 -0.44 16 21 C -0.12 -0.08 10.05 -39.58 -0.40 -0.47 16 22 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 23 C -0.12 -0.08 8.61 -39.58 -0.34 -0.42 16 24 C -0.12 0.26 7.00 -25.92 -0.18 0.08 16 25 C -0.01 0.00 9.10 -39.51 -0.36 -0.36 16 26 C -0.12 -0.11 6.22 -39.50 -0.25 -0.36 16 27 Br -0.02 -0.02 33.69 -68.01 -2.29 -2.31 16 28 C 0.00 0.01 9.40 -39.30 -0.37 -0.36 16 29 C -0.21 -0.57 5.89 -104.84 -0.62 -1.18 16 30 C 0.44 1.85 6.98 -34.33 -0.24 1.61 16 31 O -0.44 -3.02 16.93 5.00 0.08 -2.93 16 32 H 0.38 -1.62 8.74 45.56 0.40 -1.22 16 33 H 0.08 -0.02 7.96 -51.93 -0.41 -0.43 16 34 H -0.24 0.23 6.91 56.52 0.39 0.62 16 35 H -0.25 0.24 7.11 56.52 0.40 0.64 16 36 H 0.19 -0.38 4.64 -52.48 -0.24 -0.63 16 37 H 0.09 -0.03 8.13 -51.93 -0.42 -0.45 16 38 H 0.09 -0.04 8.13 -51.93 -0.42 -0.46 16 39 H 0.10 0.05 7.02 -51.93 -0.36 -0.31 16 40 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 41 H 0.12 -0.19 8.05 -52.49 -0.42 -0.62 16 42 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 43 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 44 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 45 H 0.12 -0.01 6.66 -52.49 -0.35 -0.36 16 46 H 0.09 -0.28 8.14 -51.93 -0.42 -0.71 16 47 H 0.09 -0.14 6.26 -51.93 -0.33 -0.46 16 48 H 0.16 -0.21 6.96 -52.49 -0.37 -0.57 16 49 H 0.16 0.28 7.81 -52.48 -0.41 -0.13 16 LS Contribution 434.84 15.07 6.55 6.55 Total: 0.00 -9.23 434.84 -13.30 -22.53 By element: Atomic # 1 Polarization: -3.49 SS G_CDS: -5.51 Total: -8.99 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -6.00 Total: -4.49 kcal Atomic # 8 Polarization: -5.36 SS G_CDS: -0.95 Total: -6.31 kcal Atomic # 14 Polarization: -1.88 SS G_CDS: -5.10 Total: -6.98 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.29 Total: -2.31 kcal Total LS contribution 6.55 Total: 6.55 kcal Total: -9.23 -13.30 -22.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_15070214_484008.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.318 kcal (2) G-P(sol) polarization free energy of solvation -9.232 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.550 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.530 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.848 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds