Wall clock time and date at job start Sat Mar 6 2021 06:22:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35907 * 117.00285 * 2 1 4 4 C 1.38811 * 119.98686 * 179.97438 * 3 2 1 5 5 C 1.50710 * 119.87010 * 0.02562 * 4 3 2 6 6 O 1.42893 * 109.47225 * 75.00175 * 5 4 3 7 7 Si 1.86300 * 109.46648 * 195.00105 * 5 4 3 8 8 C 1.38292 * 120.25491 * 179.97438 * 4 3 2 9 9 C 1.37951 * 120.20949 * 359.78876 * 8 4 3 10 10 C 1.39656 * 119.95917 * 0.48779 * 9 8 4 11 11 C 1.47739 * 120.12065 * 179.76976 * 10 9 8 12 12 O 1.21467 * 119.99781 * 179.72459 * 11 10 9 13 13 O 1.34711 * 120.00262 * 359.71976 * 11 10 9 14 14 C 1.45195 * 116.99974 * 180.02562 * 13 11 10 15 15 C 1.50699 * 109.47154 * 180.02562 * 14 13 11 16 16 O 1.20766 * 120.00023 * 359.97438 * 15 14 13 17 17 C 1.50698 * 120.00277 * 180.02562 * 15 14 13 18 18 H 1.09003 * 109.47017 * 314.06139 * 17 15 14 19 19 C 1.53000 * 109.47278 * 74.06030 * 17 15 14 20 20 C 1.52993 * 109.47342 * 60.00317 * 19 17 15 21 21 C 1.53007 * 109.47279 * 59.99642 * 20 19 17 22 22 H 1.09000 * 109.46742 * 60.00270 * 21 20 19 23 23 C 1.53003 * 109.47205 * 180.02562 * 21 20 19 24 24 F 1.39898 * 109.46920 * 60.00200 * 23 21 20 25 25 F 1.39894 * 109.46839 * 180.02562 * 23 21 20 26 26 F 1.39900 * 109.47180 * 300.00579 * 23 21 20 27 27 C 1.53000 * 109.47226 * 300.00429 * 21 20 19 28 28 C 1.53002 * 109.47052 * 59.99913 * 27 21 20 29 29 C 1.38482 * 119.97902 * 0.02562 * 3 2 1 30 30 H 1.09001 * 109.47319 * 59.99661 * 1 2 3 31 31 H 1.09003 * 109.47280 * 180.02562 * 1 2 3 32 32 H 1.09005 * 109.46898 * 299.99606 * 1 2 3 33 33 H 1.08997 * 109.47114 * 314.99446 * 5 4 3 34 34 H 0.96703 * 114.00372 * 179.97438 * 6 5 4 35 35 H 1.48502 * 109.99777 * 178.68063 * 7 5 4 36 36 H 1.48501 * 110.00170 * 299.99855 * 7 5 4 37 37 H 1.07997 * 119.89694 * 180.02562 * 8 4 3 38 38 H 1.08001 * 120.01783 * 180.25306 * 9 8 4 39 39 H 1.08996 * 109.47541 * 60.00111 * 14 13 11 40 40 H 1.08999 * 109.47289 * 299.99740 * 14 13 11 41 41 H 1.09000 * 109.47131 * 180.02562 * 19 17 15 42 42 H 1.09001 * 109.46886 * 299.99906 * 19 17 15 43 43 H 1.08999 * 109.47569 * 180.02562 * 20 19 17 44 44 H 1.09000 * 109.47013 * 300.00078 * 20 19 17 45 45 H 1.09000 * 109.47131 * 299.99604 * 27 21 20 46 46 H 1.09000 * 109.47118 * 179.97438 * 27 21 20 47 47 H 1.09003 * 109.46696 * 180.02562 * 28 27 21 48 48 H 1.09000 * 109.47406 * 59.99859 * 28 27 21 49 49 H 1.08001 * 120.11171 * 359.97438 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2109 0.0000 4 6 3.4323 1.2832 0.0005 5 6 4.2499 0.0171 0.0005 6 8 4.2159 -0.5718 -1.3009 7 14 6.0118 0.4159 0.4559 8 6 4.0660 2.5124 0.0000 9 6 3.3244 3.6756 -0.0055 10 6 1.9292 3.6132 -0.0002 11 6 1.1315 4.8568 -0.0009 12 8 -0.0818 4.7999 -0.0013 13 8 1.7497 6.0536 -0.0009 14 6 0.9028 7.2330 -0.0010 15 6 1.7638 8.4698 -0.0017 16 8 2.9672 8.3678 -0.0015 17 6 1.1234 9.8339 -0.0013 18 1 0.3215 9.8590 -0.7393 19 6 0.5489 10.1273 1.3861 20 6 1.6743 10.0921 2.4219 21 6 2.7240 11.1485 2.0707 22 1 2.2607 12.1351 2.0709 23 6 3.8498 11.1129 3.1062 24 9 4.4442 9.8465 3.1054 25 9 4.8092 12.0791 2.7853 26 9 3.3249 11.3808 4.3750 27 6 3.2984 10.8551 0.6833 28 6 2.1730 10.8903 -0.3526 29 6 1.2915 2.3721 0.0005 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3634 -1.0277 0.0005 32 1 -0.3633 0.5138 0.8901 33 1 3.8364 -0.6824 0.7269 34 1 4.7227 -1.3922 -1.3748 35 1 6.8215 -0.8285 0.4906 36 1 6.5872 1.3690 -0.5268 37 1 5.1448 2.5619 0.0000 38 1 3.8224 4.6339 -0.0100 39 1 0.2735 7.2285 0.8889 40 1 0.2736 7.2284 -0.8910 41 1 0.0853 11.1137 1.3862 42 1 -0.1989 9.3747 1.6363 43 1 1.2651 10.3007 3.4104 44 1 2.1376 9.1055 2.4217 45 1 3.7618 9.8685 0.6831 46 1 4.0459 11.6079 0.4329 47 1 2.5822 10.6808 -1.3409 48 1 1.7096 11.8769 -0.3524 49 1 0.2129 2.3173 0.0005 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_15498042_12428076.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:22:56 Heat of formation + Delta-G solvation = -304.842728 kcal Electronic energy + Delta-G solvation = -39054.918907 eV Core-core repulsion = 33306.761152 eV Total energy + Delta-G solvation = -5748.157755 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.142 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -51.13631 -48.63064 -48.61321 -42.14599 -41.59686 -40.94484 -38.71637 -38.42202 -37.74244 -37.44617 -33.57606 -33.33028 -31.97989 -31.47312 -30.24966 -28.41482 -27.73456 -26.75232 -24.23585 -23.85688 -23.54319 -23.36339 -22.13429 -21.90149 -20.32503 -19.70649 -19.28276 -19.18497 -18.66640 -18.61013 -18.52260 -17.88069 -17.55010 -17.38494 -17.03116 -16.77658 -16.64196 -16.49999 -15.90888 -15.83300 -15.61623 -15.52956 -15.35228 -15.20029 -15.07317 -14.83292 -14.78889 -14.76310 -14.59949 -14.48215 -14.21140 -14.14914 -13.98958 -13.79496 -13.61095 -13.48986 -13.23595 -13.21637 -12.92533 -12.84682 -12.77454 -12.31296 -12.19160 -12.15047 -12.08169 -11.96386 -11.84684 -11.75696 -11.38299 -11.26260 -10.48107 -10.30313 -10.28925 -9.44759 -4.92428 -0.66380 0.16825 0.81681 1.20599 1.22076 1.26564 1.59431 1.78778 1.91939 2.18949 2.44224 2.72744 2.84685 2.97169 3.05222 3.27674 3.47421 3.57848 3.63163 3.66255 3.73050 3.84931 3.94356 3.95086 3.98965 4.02206 4.08488 4.12887 4.17463 4.18851 4.27002 4.29064 4.29962 4.42427 4.45097 4.50709 4.59281 4.69548 4.70561 4.84237 4.85693 4.92524 5.01189 5.01476 5.08188 5.11489 5.12556 5.16645 5.21306 5.39628 5.41938 6.17578 6.37897 6.51402 6.58359 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.317 6.317 3 C 0.131 3.869 4 C -0.080 4.080 5 C -0.084 4.084 6 O -0.554 6.554 7 Si 0.770 3.230 8 C -0.093 4.093 9 C -0.088 4.088 10 C -0.097 4.097 11 C 0.516 3.484 12 O -0.521 6.521 13 O -0.341 6.341 14 C 0.003 3.997 15 C 0.363 3.637 16 O -0.451 6.451 17 C -0.127 4.127 18 H 0.143 0.857 19 C -0.101 4.101 20 C -0.130 4.130 21 C -0.122 4.122 22 H 0.137 0.863 23 C 0.443 3.557 24 F -0.194 7.194 25 F -0.193 7.193 26 F -0.190 7.190 27 C -0.146 4.146 28 C -0.098 4.098 29 C -0.150 4.150 30 H 0.059 0.941 31 H 0.121 0.879 32 H 0.067 0.933 33 H 0.088 0.912 34 H 0.394 0.606 35 H -0.283 1.283 36 H -0.284 1.284 37 H 0.159 0.841 38 H 0.156 0.844 39 H 0.124 0.876 40 H 0.125 0.875 41 H 0.109 0.891 42 H 0.096 0.904 43 H 0.089 0.911 44 H 0.056 0.944 45 H 0.088 0.912 46 H 0.069 0.931 47 H 0.070 0.930 48 H 0.100 0.900 49 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.934 1.403 0.621 5.167 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.230 6.230 3 C 0.085 3.915 4 C -0.081 4.081 5 C -0.191 4.191 6 O -0.364 6.364 7 Si 0.674 3.326 8 C -0.110 4.110 9 C -0.106 4.106 10 C -0.098 4.098 11 C 0.362 3.638 12 O -0.412 6.412 13 O -0.257 6.257 14 C -0.071 4.071 15 C 0.238 3.762 16 O -0.323 6.323 17 C -0.146 4.146 18 H 0.160 0.840 19 C -0.138 4.138 20 C -0.168 4.168 21 C -0.141 4.141 22 H 0.155 0.845 23 C 0.390 3.610 24 F -0.175 7.175 25 F -0.174 7.174 26 F -0.172 7.172 27 C -0.183 4.183 28 C -0.135 4.135 29 C -0.169 4.169 30 H 0.078 0.922 31 H 0.140 0.860 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.245 0.755 35 H -0.210 1.210 36 H -0.211 1.211 37 H 0.176 0.824 38 H 0.174 0.826 39 H 0.142 0.858 40 H 0.143 0.857 41 H 0.128 0.872 42 H 0.115 0.885 43 H 0.107 0.893 44 H 0.074 0.926 45 H 0.106 0.894 46 H 0.088 0.912 47 H 0.089 0.911 48 H 0.118 0.882 49 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -4.096 1.657 0.288 4.428 hybrid contribution -0.146 -0.964 -0.570 1.129 sum -4.241 0.693 -0.283 4.307 Atomic orbital electron populations 1.23391 0.76479 1.05849 1.02200 1.86135 1.23144 1.25613 1.88149 1.18711 0.91769 0.84591 0.96437 1.19211 0.90772 0.95317 1.02826 1.24991 1.11230 0.94749 0.88171 1.86554 1.75333 1.44452 1.30044 0.94041 0.71165 0.79632 0.87792 1.21157 1.01354 0.90309 0.98175 1.21500 0.91800 1.00097 0.97225 1.18900 0.93845 0.89721 1.07363 1.21217 0.86177 0.84254 0.72137 1.90833 1.15442 1.88102 1.46820 1.86618 1.40885 1.14381 1.83829 1.23927 0.94260 0.81667 1.07235 1.24955 0.89332 0.91771 0.70175 1.90363 1.18074 1.88826 1.35056 1.21823 1.00604 0.90373 1.01756 0.83973 1.21551 0.96478 1.05956 0.89829 1.21756 0.95954 0.97423 1.01648 1.22572 0.92876 1.05471 0.93206 0.84544 1.21182 0.84479 0.72824 0.82548 1.93164 1.85904 1.41818 1.96644 1.93160 1.67376 1.64290 1.92595 1.93165 1.86283 1.93716 1.44015 1.22046 0.99582 1.04700 0.91962 1.21398 0.94387 0.99561 0.98179 1.21385 1.01430 0.90338 1.03698 0.92219 0.86049 0.91407 0.89412 0.75518 1.20962 1.21119 0.82366 0.82642 0.85820 0.85744 0.87230 0.88502 0.89253 0.92566 0.89381 0.91192 0.91120 0.88173 0.83175 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.32 -1.59 9.81 -92.50 -0.91 -2.50 16 3 C 0.13 0.75 6.65 22.47 0.15 0.90 16 4 C -0.08 -0.35 5.31 -19.71 -0.10 -0.46 16 5 C -0.08 -0.13 2.36 71.24 0.17 0.03 16 6 O -0.55 -2.42 12.86 -148.98 -1.92 -4.34 16 7 Si 0.77 -1.40 30.19 68.60 2.07 0.67 16 8 C -0.09 -0.20 8.64 22.21 0.19 -0.01 16 9 C -0.09 -0.26 9.61 22.54 0.22 -0.05 16 10 C -0.10 -0.51 5.87 -20.11 -0.12 -0.63 16 11 C 0.52 3.08 7.90 70.33 0.56 3.64 16 12 O -0.52 -4.62 16.13 19.94 0.32 -4.30 16 13 O -0.34 -1.35 9.00 -49.81 -0.45 -1.80 16 14 C 0.00 -0.01 5.87 71.24 0.42 0.41 16 15 C 0.36 -0.96 5.12 29.10 0.15 -0.81 16 16 O -0.45 -2.32 13.37 17.38 0.23 -2.08 16 17 C -0.13 1.20 2.94 -11.54 -0.03 1.17 16 18 H 0.14 -2.16 8.14 -2.39 -0.02 -2.18 16 19 C -0.10 1.13 5.42 30.59 0.17 1.30 16 20 C -0.13 0.68 4.74 30.59 0.15 0.82 16 21 C -0.12 0.37 2.17 -10.79 -0.02 0.34 16 22 H 0.14 -1.04 8.14 -2.39 -0.02 -1.06 16 23 C 0.44 1.60 2.69 71.98 0.19 1.79 16 24 F -0.19 -1.51 16.28 44.97 0.73 -0.78 16 25 F -0.19 -1.15 16.80 44.97 0.76 -0.40 16 26 F -0.19 -0.89 16.80 44.97 0.76 -0.13 16 27 C -0.15 0.21 4.67 30.59 0.14 0.35 16 28 C -0.10 0.68 5.22 30.60 0.16 0.84 16 29 C -0.15 -0.76 8.58 22.64 0.19 -0.57 16 30 H 0.06 -0.11 7.66 -2.39 -0.02 -0.13 16 31 H 0.12 -0.65 8.14 -2.39 -0.02 -0.67 16 32 H 0.07 -0.23 7.66 -2.38 -0.02 -0.25 16 33 H 0.09 -0.03 7.82 -2.39 -0.02 -0.05 16 34 H 0.39 -1.52 8.74 -74.06 -0.65 -2.17 16 35 H -0.28 -0.61 7.11 99.48 0.71 0.10 16 36 H -0.28 -1.00 6.74 99.48 0.67 -0.33 16 37 H 0.16 -0.24 4.87 -2.91 -0.01 -0.25 16 38 H 0.16 0.14 7.61 -2.91 -0.02 0.12 16 39 H 0.12 -0.79 7.84 -2.39 -0.02 -0.81 16 40 H 0.12 -0.80 8.14 -2.39 -0.02 -0.82 16 41 H 0.11 -1.61 8.14 -2.39 -0.02 -1.63 16 42 H 0.10 -1.33 7.84 -2.39 -0.02 -1.35 16 43 H 0.09 -0.54 7.80 -2.39 -0.02 -0.56 16 44 H 0.06 -0.05 6.85 -2.39 -0.02 -0.07 16 45 H 0.09 0.38 4.72 -2.39 -0.01 0.37 16 46 H 0.07 -0.04 7.80 -2.39 -0.02 -0.06 16 47 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 48 H 0.10 -1.10 8.14 -2.39 -0.02 -1.12 16 49 H 0.15 0.52 5.88 -2.91 -0.02 0.50 16 Total: 0.00 -23.94 408.72 5.66 -18.28 By element: Atomic # 1 Polarization: -13.17 SS G_CDS: 0.38 Total: -12.78 kcal Atomic # 6 Polarization: 6.48 SS G_CDS: 3.68 Total: 10.16 kcal Atomic # 8 Polarization: -12.31 SS G_CDS: -2.72 Total: -15.03 kcal Atomic # 9 Polarization: -3.55 SS G_CDS: 2.24 Total: -1.31 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: 2.07 Total: 0.67 kcal Total: -23.94 5.66 -18.28 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_15498042_12428076.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -286.560 kcal (2) G-P(sol) polarization free energy of solvation -23.945 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -310.504 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.662 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.283 kcal (6) G-S(sol) free energy of system = (1) + (5) -304.843 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds