Wall clock time and date at job start Sat Mar 6 2021 06:06:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35909 * 116.99906 * 2 1 4 4 C 1.38816 * 119.98163 * 180.02562 * 3 2 1 5 5 C 1.50708 * 119.87733 * 359.97438 * 4 3 2 6 6 O 1.42900 * 109.47161 * 75.02082 * 5 4 3 7 7 Si 1.86302 * 109.47293 * 195.02304 * 5 4 3 8 8 C 1.38300 * 120.25222 * 180.02562 * 4 3 2 9 9 C 1.37954 * 120.20794 * 0.02562 * 8 4 3 10 10 C 1.39653 * 119.96103 * 359.97438 * 9 8 4 11 11 C 1.47741 * 120.12103 * 180.02562 * 10 9 8 12 12 O 1.21466 * 119.99774 * 180.02562 * 11 10 9 13 13 O 1.34709 * 120.00186 * 359.97438 * 11 10 9 14 14 C 1.45200 * 117.00168 * 179.97438 * 13 11 10 15 15 C 1.53006 * 109.46844 * 180.02562 * 14 13 11 16 16 H 1.08994 * 112.84852 * 43.80816 * 15 14 13 17 17 C 1.53784 * 113.60942 * 175.00263 * 15 14 13 18 18 C 1.53783 * 87.17332 * 89.07215 * 17 15 14 19 19 O 1.42894 * 113.61824 * 270.92175 * 18 17 15 20 20 C 1.42898 * 114.00379 * 294.85377 * 19 18 17 21 21 C 1.53004 * 113.61177 * 140.01968 * 18 17 15 22 22 F 1.39899 * 109.47404 * 54.78950 * 21 18 17 23 23 F 1.39908 * 109.46916 * 174.78983 * 21 18 17 24 24 F 1.39902 * 109.47329 * 294.78712 * 21 18 17 25 25 C 1.53781 * 113.61428 * 272.49760 * 15 14 13 26 26 C 1.38482 * 119.98560 * 0.29744 * 3 2 1 27 27 H 1.08993 * 109.46836 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.46617 * 300.00220 * 1 2 3 29 29 H 1.09002 * 109.46778 * 60.00071 * 1 2 3 30 30 H 1.08997 * 109.46722 * 315.02441 * 5 4 3 31 31 H 0.96701 * 114.00036 * 60.00154 * 6 5 4 32 32 H 1.48497 * 109.99833 * 58.67832 * 7 5 4 33 33 H 1.48492 * 109.99693 * 179.97438 * 7 5 4 34 34 H 1.07998 * 119.89750 * 180.02562 * 8 4 3 35 35 H 1.07997 * 120.01565 * 180.02562 * 9 8 4 36 36 H 1.09008 * 109.46987 * 60.00413 * 14 13 11 37 37 H 1.09001 * 109.47115 * 300.00557 * 14 13 11 38 38 H 1.09004 * 113.61328 * 203.66298 * 17 15 14 39 39 H 1.09000 * 113.61725 * 334.48194 * 17 15 14 40 40 H 1.08997 * 109.47224 * 302.65330 * 20 19 18 41 41 H 1.09006 * 109.46911 * 62.64328 * 20 19 18 42 42 H 1.09001 * 109.47734 * 182.64364 * 20 19 18 43 43 H 1.09001 * 113.61484 * 25.43332 * 25 15 14 44 44 H 1.08993 * 113.61521 * 156.34183 * 25 15 14 45 45 H 1.08001 * 120.10390 * 359.97438 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0461 1.2110 0.0000 4 6 3.4323 1.2832 -0.0005 5 6 4.2501 0.0173 -0.0005 6 8 4.2155 -0.5721 -1.3019 7 14 6.0122 0.4161 0.4540 8 6 4.0660 2.5125 0.0000 9 6 3.3243 3.6757 0.0016 10 6 1.9292 3.6133 0.0021 11 6 1.1314 4.8568 0.0033 12 8 -0.0819 4.7999 0.0042 13 8 1.7496 6.0537 0.0043 14 6 0.9027 7.2331 0.0048 15 6 1.7770 8.4887 0.0054 16 1 2.6136 8.4221 -0.6900 17 6 0.9769 9.7963 -0.1168 18 6 0.8854 9.7946 1.4183 19 8 -0.2500 9.0892 1.9233 20 6 -1.5035 9.6826 1.5790 21 6 1.0516 11.1811 2.0437 22 9 0.1234 12.0620 1.4784 23 9 0.8363 11.0990 3.4236 24 9 2.3472 11.6499 1.8009 25 6 2.1794 8.9586 1.4133 26 6 1.2915 2.3722 0.0062 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 3.8368 -0.6821 0.7261 31 1 4.5688 -0.0043 -2.0003 32 1 6.0586 1.0587 1.7919 33 1 6.8288 -0.8241 0.4581 34 1 5.1449 2.5620 -0.0008 35 1 3.8224 4.6340 0.0016 36 1 0.2731 7.2279 0.8947 37 1 0.2736 7.2290 -0.8853 38 1 1.5569 10.6272 -0.5188 39 1 0.0134 9.6742 -0.6118 40 1 -1.5302 10.7107 1.9401 41 1 -1.6237 9.6750 0.4956 42 1 -2.3127 9.1150 2.0383 43 1 2.1860 8.1598 2.1549 44 1 3.0880 9.5603 1.4296 45 1 0.2129 2.3173 0.0107 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_15498042_17321610.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:06:36 Heat of formation + Delta-G solvation = -278.435272 kcal Electronic energy + Delta-G solvation = -35379.637675 eV Core-core repulsion = 29916.388793 eV Total energy + Delta-G solvation = -5463.248882 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.126 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -51.19754 -48.74645 -48.62609 -42.01808 -41.54426 -40.79008 -38.69728 -37.87861 -37.40926 -36.92364 -33.17630 -31.46459 -30.78868 -28.59068 -28.35692 -27.95211 -27.00744 -26.86530 -23.97571 -23.50577 -23.28837 -21.96537 -20.79494 -19.88706 -19.59621 -19.47705 -19.26290 -18.61623 -17.85288 -17.57056 -17.41956 -17.22030 -17.11898 -16.91898 -16.58286 -16.43133 -15.91675 -15.71900 -15.66804 -15.54381 -15.49203 -15.25316 -15.11724 -14.97898 -14.87138 -14.79964 -14.72622 -14.32483 -14.25832 -13.94460 -13.72002 -13.63296 -13.42859 -13.25771 -12.98801 -12.85065 -12.54377 -12.46178 -12.26278 -12.18411 -12.13004 -11.92833 -11.80844 -11.69859 -11.53073 -10.89409 -10.43135 -10.24362 -9.39710 -5.07321 -0.55625 0.19441 1.24774 1.39330 1.41655 1.52074 1.62906 1.96113 1.96940 2.17763 2.49695 2.54070 2.58922 2.78194 3.10059 3.23764 3.35763 3.43540 3.53653 3.55432 3.63803 3.78610 3.89948 3.99737 4.05927 4.09475 4.12873 4.17650 4.18693 4.21378 4.27219 4.29156 4.34461 4.43871 4.45697 4.52549 4.53820 4.62035 4.65018 4.66729 4.80386 4.97347 5.06543 5.10095 5.32772 5.42868 5.58503 6.20820 6.59602 6.65975 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.301 6.301 3 C 0.144 3.856 4 C -0.119 4.119 5 C -0.061 4.061 6 O -0.532 6.532 7 Si 0.684 3.316 8 C -0.089 4.089 9 C -0.093 4.093 10 C -0.081 4.081 11 C 0.511 3.489 12 O -0.500 6.500 13 O -0.347 6.347 14 C 0.078 3.922 15 C -0.100 4.100 16 H 0.109 0.891 17 C -0.143 4.143 18 C 0.037 3.963 19 O -0.332 6.332 20 C 0.010 3.990 21 C 0.438 3.562 22 F -0.181 7.181 23 F -0.174 7.174 24 F -0.174 7.174 25 C -0.112 4.112 26 C -0.147 4.147 27 H 0.105 0.895 28 H 0.058 0.942 29 H 0.059 0.941 30 H 0.116 0.884 31 H 0.376 0.624 32 H -0.254 1.254 33 H -0.252 1.252 34 H 0.145 0.855 35 H 0.147 0.853 36 H 0.093 0.907 37 H 0.077 0.923 38 H 0.114 0.886 39 H 0.095 0.905 40 H 0.055 0.945 41 H 0.055 0.945 42 H 0.102 0.898 43 H 0.099 0.901 44 H 0.118 0.882 45 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.901 1.673 -3.303 4.162 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.213 6.213 3 C 0.098 3.902 4 C -0.120 4.120 5 C -0.172 4.172 6 O -0.337 6.337 7 Si 0.585 3.415 8 C -0.106 4.106 9 C -0.112 4.112 10 C -0.082 4.082 11 C 0.356 3.644 12 O -0.389 6.389 13 O -0.264 6.264 14 C 0.005 3.995 15 C -0.118 4.118 16 H 0.127 0.873 17 C -0.180 4.180 18 C -0.006 4.006 19 O -0.250 6.250 20 C -0.086 4.086 21 C 0.383 3.617 22 F -0.163 7.163 23 F -0.155 7.155 24 F -0.156 7.156 25 C -0.149 4.149 26 C -0.166 4.166 27 H 0.124 0.876 28 H 0.077 0.923 29 H 0.078 0.922 30 H 0.134 0.866 31 H 0.223 0.777 32 H -0.179 1.179 33 H -0.177 1.177 34 H 0.162 0.838 35 H 0.165 0.835 36 H 0.111 0.889 37 H 0.095 0.905 38 H 0.132 0.868 39 H 0.114 0.886 40 H 0.073 0.927 41 H 0.074 0.926 42 H 0.121 0.879 43 H 0.117 0.883 44 H 0.136 0.864 45 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 1.995 0.728 -2.260 3.101 hybrid contribution -1.336 0.714 0.282 1.541 sum 0.658 1.442 -1.978 2.535 Atomic orbital electron populations 1.23192 0.77764 1.04651 1.01720 1.86197 1.21686 1.25506 1.87957 1.18586 0.91432 0.84409 0.95816 1.20059 0.91574 0.96462 1.03951 1.25024 1.08648 0.93989 0.89516 1.86576 1.86858 1.44327 1.15929 0.95089 0.76520 0.84282 0.85560 1.20833 0.99744 0.90759 0.99310 1.21344 0.92055 0.99516 0.98244 1.18846 0.93399 0.89918 1.06051 1.21059 0.86446 0.83941 0.72985 1.90860 1.14901 1.87859 1.45247 1.86468 1.41378 1.14522 1.84044 1.23037 0.91869 0.80372 1.04220 1.22106 0.99466 0.91914 0.98317 0.87269 1.23598 1.03069 0.98751 0.92607 1.24104 0.92617 0.88213 0.95660 1.88092 1.12900 1.48626 1.75374 1.23162 0.84779 0.99570 1.01097 1.21159 0.74064 0.89116 0.77365 1.93188 1.65978 1.72268 1.84839 1.93225 1.94413 1.96495 1.31370 1.93181 1.38273 1.90026 1.94105 1.23329 0.93580 0.99672 0.98282 1.21373 1.01270 0.90492 1.03503 0.87635 0.92345 0.92199 0.86632 0.77667 1.17885 1.17703 0.83797 0.83535 0.88866 0.90504 0.86766 0.88647 0.92658 0.92634 0.87922 0.88259 0.86368 0.83620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.30 -0.64 9.81 -19.46 -0.19 -0.83 16 3 C 0.14 0.23 6.65 -39.28 -0.26 -0.03 16 4 C -0.12 -0.03 5.28 -104.38 -0.55 -0.58 16 5 C -0.06 -0.01 2.37 36.01 0.09 0.08 16 6 O -0.53 -0.35 12.88 -35.23 -0.45 -0.80 16 7 Si 0.68 -1.05 29.90 -169.99 -5.08 -6.13 16 8 C -0.09 0.15 8.64 -39.66 -0.34 -0.19 16 9 C -0.09 0.10 9.61 -39.16 -0.38 -0.28 16 10 C -0.08 -0.09 5.87 -105.00 -0.62 -0.71 16 11 C 0.51 1.16 7.90 34.61 0.27 1.43 16 12 O -0.50 -2.41 16.13 -19.24 -0.31 -2.72 16 13 O -0.35 -0.19 9.47 -40.52 -0.38 -0.57 16 14 C 0.08 -0.04 5.06 37.16 0.19 0.15 16 15 C -0.10 0.26 4.21 -89.80 -0.38 -0.12 16 16 H 0.11 -0.41 8.14 -51.93 -0.42 -0.84 16 17 C -0.14 0.41 6.51 -25.92 -0.17 0.24 16 18 C 0.04 -0.03 0.85 -89.66 -0.08 -0.11 16 19 O -0.33 -0.12 8.36 -35.23 -0.29 -0.42 16 20 C 0.01 -0.01 10.44 101.05 1.05 1.04 16 21 C 0.44 0.32 2.52 37.16 0.09 0.41 16 22 F -0.18 -0.20 15.24 2.25 0.03 -0.16 16 23 F -0.17 -0.45 17.10 2.25 0.04 -0.42 16 24 F -0.17 -0.11 15.83 2.25 0.04 -0.07 16 25 C -0.11 0.23 6.90 -25.77 -0.18 0.05 16 26 C -0.15 -0.21 8.58 -39.01 -0.33 -0.55 16 27 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 28 H 0.06 -0.09 7.65 -51.93 -0.40 -0.48 16 29 H 0.06 -0.08 7.67 -51.93 -0.40 -0.48 16 30 H 0.12 0.16 7.82 -51.93 -0.41 -0.24 16 31 H 0.38 -1.37 8.70 45.56 0.40 -0.97 16 32 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 33 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 34 H 0.14 -0.67 5.10 -52.49 -0.27 -0.93 16 35 H 0.15 -0.44 7.61 -52.49 -0.40 -0.84 16 36 H 0.09 0.07 6.12 -51.92 -0.32 -0.25 16 37 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.11 -0.44 8.06 -51.93 -0.42 -0.86 16 39 H 0.10 -0.32 6.70 -51.93 -0.35 -0.67 16 40 H 0.05 -0.05 6.25 -51.93 -0.32 -0.37 16 41 H 0.06 -0.14 6.76 -51.93 -0.35 -0.50 16 42 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 43 H 0.10 -0.14 8.10 -51.93 -0.42 -0.56 16 44 H 0.12 -0.37 7.02 -51.93 -0.36 -0.74 16 45 H 0.15 0.17 5.88 -52.49 -0.31 -0.14 16 LS Contribution 382.13 15.07 5.76 5.76 Total: 0.00 -8.42 382.13 -6.66 -15.08 By element: Atomic # 1 Polarization: -5.32 SS G_CDS: -5.21 Total: -10.53 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -0.60 Total: 1.82 kcal Atomic # 8 Polarization: -3.71 SS G_CDS: -1.63 Total: -5.34 kcal Atomic # 9 Polarization: -0.76 SS G_CDS: 0.11 Total: -0.65 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.08 Total: -6.13 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -8.42 -6.66 -15.08 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_15498042_17321610.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -263.354 kcal (2) G-P(sol) polarization free energy of solvation -8.421 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -271.775 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.660 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.081 kcal (6) G-S(sol) free energy of system = (1) + (5) -278.435 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds