Wall clock time and date at job start Sat Mar 6 2021 08:23:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 H 1.00899 * 109.47391 * 2 1 4 4 C 1.46897 * 109.47253 * 120.00428 * 2 1 3 5 5 C 1.46901 * 109.47243 * 240.00302 * 2 1 3 6 6 H 1.08999 * 112.84774 * 311.19894 * 5 2 1 7 7 C 1.53783 * 113.68885 * 82.46207 * 5 2 1 8 8 C 1.53781 * 87.07982 * 139.99663 * 7 5 2 9 9 H 1.09001 * 113.69027 * 220.00763 * 8 7 5 10 10 C 1.50697 * 113.61690 * 89.12012 * 8 7 5 11 11 O 1.20833 * 119.99747 * 262.50435 * 10 8 7 12 12 O 1.34230 * 120.00262 * 82.22057 * 10 8 7 13 13 C 1.45202 * 116.99836 * 180.27336 * 12 10 8 14 14 C 1.50701 * 109.46859 * 180.02562 * 13 12 10 15 15 C 1.38940 * 120.03997 * 180.02562 * 14 13 12 16 16 O 1.34888 * 120.98465 * 0.02562 * 15 14 13 17 17 C 1.33713 * 122.40634 * 180.02562 * 16 15 14 18 18 C 1.34530 * 122.85984 * 359.95661 * 17 16 15 19 19 C 1.50700 * 120.20298 * 179.97438 * 18 17 16 20 20 O 1.42901 * 109.47439 * 250.02387 * 19 18 17 21 21 Si 1.86294 * 109.46982 * 10.02507 * 19 18 17 22 22 C 1.42004 * 119.59795 * 0.02562 * 18 17 16 23 23 O 1.21913 * 121.40932 * 179.97438 * 22 18 17 24 24 C 1.40449 * 119.33725 * 180.02562 * 15 14 13 25 25 C 1.39341 * 120.24142 * 359.97438 * 24 15 14 26 26 C 1.37885 * 119.52502 * 0.02562 * 25 24 15 27 27 Br 1.89097 * 119.86397 * 180.02562 * 26 25 24 28 28 C 1.37863 * 120.04251 * 359.72995 * 14 13 12 29 29 C 1.53776 * 87.08140 * 334.56507 * 8 7 5 30 30 H 1.08995 * 109.46869 * 179.97438 * 1 2 3 31 31 H 1.09001 * 109.46639 * 299.99346 * 1 2 3 32 32 H 1.08991 * 109.47031 * 59.99351 * 1 2 3 33 33 H 1.09001 * 109.47483 * 299.99710 * 4 2 1 34 34 H 1.08995 * 109.47422 * 60.00046 * 4 2 1 35 35 H 1.09003 * 109.47313 * 179.97438 * 4 2 1 36 36 H 1.08994 * 113.61488 * 25.44633 * 7 5 2 37 37 H 1.09007 * 113.61560 * 254.54594 * 7 5 2 38 38 H 1.08998 * 109.47630 * 300.00638 * 13 12 10 39 39 H 1.09004 * 109.46770 * 60.01042 * 13 12 10 40 40 H 1.07998 * 118.56943 * 180.02562 * 17 16 15 41 41 H 1.09003 * 109.47112 * 130.02904 * 19 18 17 42 42 H 0.96694 * 114.00174 * 180.02562 * 20 19 18 43 43 H 1.48502 * 110.00184 * 178.67756 * 21 19 18 44 44 H 1.48494 * 110.00395 * 299.99830 * 21 19 18 45 45 H 1.08000 * 120.23858 * 180.02562 * 25 24 15 46 46 H 1.08007 * 119.64990 * 359.97438 * 28 14 13 47 47 H 1.09004 * 113.61450 * 139.98018 * 29 8 7 48 48 H 1.08995 * 113.61726 * 270.88822 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9587 -0.6926 1.1993 5 6 1.9587 -0.6924 -1.1995 6 1 1.4760 -1.6567 -1.3582 7 6 1.9905 0.1946 -2.4553 8 6 3.3292 -0.4785 -2.8010 9 1 4.0733 0.2080 -3.2049 10 6 3.1800 -1.7309 -3.6258 11 8 3.1960 -2.8133 -3.0889 12 8 3.0236 -1.6438 -4.9561 13 6 2.8797 -2.8908 -5.6859 14 6 2.7165 -2.5970 -7.1550 15 6 2.5603 -3.6398 -8.0597 16 8 2.5513 -4.9233 -7.6451 17 6 2.4035 -5.9485 -8.4907 18 6 2.2516 -5.7845 -9.8173 19 6 2.0902 -6.9834 -10.7159 20 8 3.2638 -7.1405 -11.5161 21 14 1.8385 -8.5089 -9.6767 22 6 2.2455 -4.4747 -10.3659 23 8 2.1107 -4.2879 -11.5630 24 6 2.4099 -3.3491 -9.4255 25 6 2.4169 -2.0274 -9.8667 26 6 2.5732 -1.0069 -8.9528 27 35 2.5835 0.7903 -9.5408 28 6 2.7158 -1.2929 -7.6021 29 6 3.4925 -0.7479 -1.2958 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3632 0.5137 0.8901 32 1 -0.3633 0.5139 -0.8899 33 1 1.5955 -0.1788 2.0894 34 1 1.5954 -1.7202 1.1993 35 1 3.0487 -0.6930 1.1991 36 1 2.0805 1.2585 -2.2362 37 1 1.1942 -0.0262 -3.1662 38 1 3.7676 -3.5047 -5.5350 39 1 2.0022 -3.4254 -5.3223 40 1 2.4050 -6.9519 -8.0912 41 1 1.2257 -6.8382 -11.3637 42 1 3.2297 -7.8946 -12.1204 43 1 1.6462 -9.6934 -10.5514 44 1 3.0105 -8.7180 -8.7891 45 1 2.3008 -1.8040 -10.9169 46 1 2.8323 -0.4853 -6.8944 47 1 3.9088 -1.7298 -1.0706 48 1 3.9931 0.0583 -0.7597 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_15713764_484008.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:23:18 Heat of formation + Delta-G solvation = 19.247638 kcal Electronic energy + Delta-G solvation = -34403.681372 eV Core-core repulsion = 29558.124842 eV Total energy + Delta-G solvation = -4845.556530 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 439.068 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -43.37921 -42.92576 -41.41867 -40.20095 -39.90314 -38.31788 -37.95229 -37.17503 -34.78910 -33.77141 -33.22338 -30.76411 -29.64626 -29.13895 -27.82808 -27.54165 -26.67828 -26.02204 -25.43880 -24.39369 -23.65600 -22.43147 -21.20073 -20.58515 -19.65123 -19.09313 -18.78130 -18.66573 -18.48779 -18.14097 -17.80341 -17.57010 -17.34463 -17.04194 -16.83123 -16.51456 -16.30000 -15.83674 -15.75153 -15.58828 -15.43386 -15.13025 -14.89995 -14.49591 -14.23438 -14.05556 -13.96299 -13.86837 -13.85810 -13.65933 -13.50847 -13.32259 -13.26744 -13.05661 -12.98109 -12.88639 -12.70150 -12.31631 -12.03775 -12.02402 -11.85098 -11.78615 -11.56283 -11.53089 -11.23249 -10.73095 -10.54664 -10.45381 -9.62063 -5.06420 -0.88873 -0.73830 -0.00822 0.31894 0.92020 0.95836 1.01610 1.11816 1.30209 1.36180 1.48855 1.87412 2.22139 2.51285 2.63363 2.79869 2.83296 2.89525 3.06298 3.23027 3.26446 3.37755 3.44497 3.52024 3.54535 3.68916 3.71319 3.80037 3.92233 3.95919 4.04899 4.11068 4.18375 4.21450 4.26472 4.28092 4.31987 4.39431 4.52037 4.53207 4.53948 4.57694 4.62124 4.75461 4.76178 4.81348 4.84828 4.87338 4.90421 4.99507 5.00952 5.30216 5.68946 6.27041 6.46102 6.53973 Molecular weight = 439.07amu Principal moments of inertia in cm(-1) A = 0.006205 B = 0.002150 C = 0.001659 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4511.319599 B =13019.933609 C =16876.454849 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.049 4.049 2 N -0.359 5.359 3 H 0.442 0.558 4 C -0.050 4.050 5 C 0.006 3.994 6 H 0.149 0.851 7 C -0.118 4.118 8 C -0.120 4.120 9 H 0.148 0.852 10 C 0.474 3.526 11 O -0.525 6.525 12 O -0.351 6.351 13 C 0.124 3.876 14 C -0.097 4.097 15 C 0.162 3.838 16 O -0.198 6.198 17 C 0.172 3.828 18 C -0.298 4.298 19 C -0.080 4.080 20 O -0.562 6.562 21 Si 0.787 3.213 22 C 0.420 3.580 23 O -0.499 6.499 24 C -0.228 4.228 25 C -0.013 4.013 26 C -0.122 4.122 27 Br -0.025 7.025 28 C -0.001 4.001 29 C -0.126 4.126 30 H 0.112 0.888 31 H 0.133 0.867 32 H 0.126 0.874 33 H 0.134 0.866 34 H 0.111 0.889 35 H 0.124 0.876 36 H 0.156 0.844 37 H 0.101 0.899 38 H 0.097 0.903 39 H 0.111 0.889 40 H 0.240 0.760 41 H 0.072 0.928 42 H 0.395 0.605 43 H -0.290 1.290 44 H -0.255 1.255 45 H 0.138 0.862 46 H 0.187 0.813 47 H 0.090 0.910 48 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.879 12.211 40.543 42.897 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 N 0.063 4.937 3 H 0.281 0.719 4 C -0.192 4.192 5 C -0.097 4.097 6 H 0.167 0.833 7 C -0.155 4.155 8 C -0.139 4.139 9 H 0.166 0.834 10 C 0.318 3.682 11 O -0.413 6.413 12 O -0.267 6.267 13 C 0.050 3.950 14 C -0.098 4.098 15 C 0.116 3.884 16 O -0.100 6.100 17 C 0.107 3.893 18 C -0.301 4.301 19 C -0.185 4.185 20 O -0.372 6.372 21 Si 0.687 3.313 22 C 0.306 3.694 23 O -0.382 6.382 24 C -0.231 4.231 25 C -0.033 4.033 26 C -0.201 4.201 27 Br 0.061 6.939 28 C -0.021 4.021 29 C -0.163 4.163 30 H 0.131 0.869 31 H 0.151 0.849 32 H 0.144 0.856 33 H 0.153 0.847 34 H 0.130 0.870 35 H 0.142 0.858 36 H 0.174 0.826 37 H 0.120 0.880 38 H 0.115 0.885 39 H 0.129 0.871 40 H 0.255 0.745 41 H 0.090 0.910 42 H 0.245 0.755 43 H -0.216 1.216 44 H -0.181 1.181 45 H 0.156 0.844 46 H 0.204 0.796 47 H 0.109 0.891 48 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -6.546 12.120 40.608 42.881 hybrid contribution 0.833 -0.902 -2.615 2.889 sum -5.713 11.219 37.993 40.025 Atomic orbital electron populations 1.24132 0.75625 1.09271 1.10030 1.44928 1.16118 1.19037 1.13667 0.71932 1.24121 1.05871 1.02383 0.86839 1.25097 0.98571 1.00769 0.85264 0.83324 1.23560 0.95412 1.01933 0.94615 1.21980 1.03891 0.92914 0.95132 0.83398 1.23824 0.71575 0.92074 0.80716 1.90768 1.46492 1.31363 1.72727 1.86385 1.82714 1.35948 1.21675 1.21520 1.04941 0.83976 0.84542 1.18885 1.06386 0.90131 0.94440 1.18979 0.96107 0.82300 0.90964 1.83155 1.76135 1.12038 1.38697 1.24346 0.85727 0.91083 0.88139 1.20951 1.17107 0.96532 0.95496 1.25001 0.90062 1.04668 0.98798 1.86538 1.39624 1.54244 1.56789 0.94603 0.84363 0.71627 0.80665 1.18863 0.73596 0.88753 0.88177 1.90740 1.41579 1.88014 1.17852 1.20698 1.12174 0.96252 0.93932 1.21114 0.91499 0.89994 1.00706 1.21905 1.10049 0.92125 0.96062 1.96875 1.97646 1.09216 1.90172 1.21262 0.90877 0.96673 0.93244 1.23564 0.92863 1.07233 0.92632 0.86938 0.84909 0.85555 0.84749 0.87010 0.85800 0.82590 0.88041 0.88540 0.87130 0.74496 0.90955 0.75487 1.21646 1.18113 0.84411 0.79558 0.89088 0.83013 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.10 9.15 127.69 1.17 4.26 16 2 N -0.36 23.70 0.62 -920.17 -0.57 23.13 16 3 H 0.44 -31.65 8.20 -89.69 -0.74 -32.39 16 4 C -0.05 3.15 8.99 127.69 1.15 4.30 16 5 C 0.01 -0.36 2.57 45.44 0.12 -0.24 16 6 H 0.15 -8.18 8.03 -2.39 -0.02 -8.20 16 7 C -0.12 6.56 7.15 31.12 0.22 6.79 16 8 C -0.12 5.64 4.45 -11.02 -0.05 5.60 16 9 H 0.15 -7.11 8.14 -2.39 -0.02 -7.13 16 10 C 0.47 -16.90 7.21 71.23 0.51 -16.39 16 11 O -0.53 15.36 15.49 21.94 0.34 15.70 16 12 O -0.35 11.24 8.68 -51.41 -0.45 10.79 16 13 C 0.12 -3.47 5.38 71.24 0.38 -3.09 16 14 C -0.10 2.21 5.89 -19.78 -0.12 2.09 16 15 C 0.16 -2.83 6.74 22.98 0.15 -2.68 16 16 O -0.20 4.06 9.21 -2.77 -0.03 4.03 16 17 C 0.17 -3.35 9.99 66.97 0.67 -2.68 16 18 C -0.30 3.22 5.35 -19.78 -0.11 3.12 16 19 C -0.08 0.87 2.45 71.24 0.17 1.05 16 20 O -0.56 3.20 12.86 -148.98 -1.92 1.29 16 21 Si 0.79 -14.81 30.02 68.60 2.06 -12.75 16 22 C 0.42 -1.75 6.98 25.67 0.18 -1.57 16 23 O -0.50 -2.34 16.93 -5.03 -0.09 -2.42 16 24 C -0.23 2.34 5.89 -20.01 -0.12 2.22 16 25 C -0.01 0.14 9.40 22.45 0.21 0.35 16 26 C -0.12 1.96 6.22 22.32 0.14 2.09 16 27 Br -0.02 0.38 33.69 -20.37 -0.69 -0.30 16 28 C 0.00 0.03 9.10 22.31 0.20 0.23 16 29 C -0.13 6.66 5.96 31.12 0.19 6.85 16 30 H 0.11 -6.85 8.13 -2.39 -0.02 -6.87 16 31 H 0.13 -8.52 8.14 -2.39 -0.02 -8.54 16 32 H 0.13 -8.03 8.01 -2.39 -0.02 -8.05 16 33 H 0.13 -8.58 8.14 -2.39 -0.02 -8.60 16 34 H 0.11 -6.68 8.14 -2.39 -0.02 -6.70 16 35 H 0.12 -7.72 7.14 -2.39 -0.02 -7.74 16 36 H 0.16 -9.67 7.95 -2.39 -0.02 -9.69 16 37 H 0.10 -5.32 8.09 -2.38 -0.02 -5.34 16 38 H 0.10 -2.62 8.13 -2.39 -0.02 -2.64 16 39 H 0.11 -3.36 8.13 -2.38 -0.02 -3.38 16 40 H 0.24 -6.44 4.64 -2.91 -0.01 -6.46 16 41 H 0.07 -0.71 7.96 -2.39 -0.02 -0.73 16 42 H 0.39 -5.24 8.74 -74.06 -0.65 -5.88 16 43 H -0.29 3.40 7.11 99.48 0.71 4.11 16 44 H -0.25 4.42 6.91 99.48 0.69 5.11 16 45 H 0.14 -1.03 7.81 -2.91 -0.02 -1.05 16 46 H 0.19 -5.30 6.96 -2.91 -0.02 -5.32 16 47 H 0.09 -4.20 7.44 -2.39 -0.02 -4.21 16 48 H 0.15 -9.02 8.04 -2.39 -0.02 -9.04 16 Total: 1.00 -90.40 416.35 3.42 -86.98 By element: Atomic # 1 Polarization: -138.41 SS G_CDS: -0.33 Total: -138.74 kcal Atomic # 6 Polarization: 7.21 SS G_CDS: 5.08 Total: 12.29 kcal Atomic # 7 Polarization: 23.70 SS G_CDS: -0.57 Total: 23.13 kcal Atomic # 8 Polarization: 31.52 SS G_CDS: -2.13 Total: 29.39 kcal Atomic # 14 Polarization: -14.81 SS G_CDS: 2.06 Total: -12.75 kcal Atomic # 35 Polarization: 0.38 SS G_CDS: -0.69 Total: -0.30 kcal Total: -90.40 3.42 -86.98 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_15713764_484008.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.233 kcal (2) G-P(sol) polarization free energy of solvation -90.404 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.828 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.419 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -86.985 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.248 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds