Wall clock time and date at job start Sat Mar 6 2021 04:56:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86303 * 109.47030 * 2 1 4 4 C 1.50694 * 109.47649 * 120.00397 * 2 1 3 5 5 C 1.34543 * 120.20203 * 249.98035 * 4 2 1 6 6 O 1.33718 * 122.85053 * 180.02562 * 5 4 2 7 7 C 1.34886 * 122.40669 * 0.02562 * 6 5 4 8 8 C 1.40415 * 119.68382 * 359.97438 * 7 6 5 9 9 C 1.39390 * 120.23197 * 179.97438 * 8 7 6 10 10 C 1.37837 * 119.52998 * 0.02562 * 9 8 7 11 11 Br 1.89103 * 119.86341 * 179.97438 * 10 9 8 12 12 C 1.38847 * 120.27597 * 359.96658 * 10 9 8 13 13 C 1.37823 * 120.69985 * 359.79741 * 12 10 9 14 14 C 1.50703 * 120.03791 * 179.97438 * 13 12 10 15 15 O 1.45205 * 109.47116 * 0.48104 * 14 13 12 16 16 C 1.34228 * 116.99806 * 179.97438 * 15 14 13 17 17 O 1.20814 * 120.00183 * 0.02562 * 16 15 14 18 18 C 1.50704 * 119.99556 * 179.97438 * 16 15 14 19 19 C 1.53007 * 109.47129 * 300.03521 * 18 16 15 20 20 C 1.53078 * 109.42033 * 179.51027 * 19 18 16 21 21 C 1.52465 * 109.58594 * 59.14484 * 20 19 18 22 22 C 1.52471 * 110.75439 * 301.43755 * 21 20 19 23 23 C 1.53016 * 109.46510 * 180.02562 * 18 16 15 24 24 N 1.46836 * 110.54308 * 64.30646 * 21 20 19 25 25 C 1.34682 * 106.43141 * 118.50829 * 24 21 20 26 26 O 1.21533 * 123.79315 * 179.97438 * 25 24 21 27 27 N 1.33871 * 112.42077 * 359.97438 * 25 24 21 28 28 C 1.34910 * 111.60723 * 359.97438 * 27 25 24 29 29 O 1.21239 * 127.25493 * 180.02562 * 28 27 25 30 30 C 1.41998 * 120.20817 * 69.99390 * 4 2 1 31 31 O 1.21926 * 121.40183 * 359.96280 * 30 4 2 32 32 H 0.96690 * 114.00395 * 59.99736 * 1 2 3 33 33 H 1.09002 * 109.47036 * 240.00328 * 2 1 3 34 34 H 1.48498 * 110.00019 * 60.00207 * 3 2 1 35 35 H 1.48497 * 109.99974 * 181.32560 * 3 2 1 36 36 H 1.08002 * 118.57596 * 0.02562 * 5 4 2 37 37 H 1.08001 * 120.23166 * 180.02562 * 9 8 7 38 38 H 1.08000 * 119.64568 * 180.02562 * 12 10 9 39 39 H 1.08993 * 109.47496 * 120.48245 * 14 13 12 40 40 H 1.09000 * 109.46789 * 240.48360 * 14 13 12 41 41 H 1.09002 * 109.46099 * 60.02102 * 18 16 15 42 42 H 1.09001 * 109.47758 * 299.49179 * 19 18 16 43 43 H 1.08996 * 109.48223 * 59.52066 * 19 18 16 44 44 H 1.08999 * 109.44834 * 299.11068 * 20 19 18 45 45 H 1.08999 * 109.45152 * 179.18446 * 20 19 18 46 46 H 1.09004 * 109.45012 * 298.53030 * 22 21 20 47 47 H 1.09000 * 109.45696 * 178.60260 * 22 21 20 48 48 H 1.09000 * 109.48012 * 300.48194 * 23 18 16 49 49 H 1.09006 * 109.47760 * 60.51077 * 23 18 16 50 50 H 0.96995 * 126.78250 * 298.47993 * 24 21 20 51 51 H 0.96997 * 124.19522 * 179.97438 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7104 1.2303 5 6 2.5324 -0.0170 2.2143 6 8 2.9982 -0.5930 3.3275 7 6 2.9011 -1.9199 3.5500 8 6 2.2915 -2.7431 2.5896 9 6 2.1855 -4.1158 2.8074 10 6 2.6828 -4.6592 3.9725 11 35 2.5434 -6.5202 4.2780 12 6 3.2859 -3.8459 4.9226 13 6 3.4006 -2.4881 4.7158 14 6 4.0574 -1.6192 5.7573 15 8 4.4919 -2.4433 6.8711 16 6 5.1011 -1.8178 7.8906 17 8 5.2653 -0.6215 7.8538 18 6 5.5790 -2.6079 9.0816 19 6 4.3894 -3.3124 9.7370 20 6 4.8780 -4.1243 10.9393 21 6 5.5555 -3.1962 11.9414 22 6 6.7287 -2.4675 11.2954 23 6 6.2320 -1.6623 10.0920 24 7 4.5896 -2.2348 12.4880 25 6 4.5366 -2.4605 13.8147 26 8 3.8293 -1.8340 14.5792 27 7 5.3503 -3.4524 14.1968 28 6 6.0200 -3.9769 13.1497 29 8 6.8252 -4.8830 13.1729 30 6 1.7739 -2.1158 1.3582 31 8 1.2340 -2.7764 0.4872 32 1 -0.3933 0.4417 -0.7649 33 1 1.7923 -0.5138 -0.8900 34 1 1.5615 2.4679 1.2085 35 1 3.5346 1.7703 -0.0323 36 1 2.6435 1.0512 2.1001 37 1 1.7170 -4.7491 2.0686 38 1 3.6724 -4.2825 5.8316 39 1 4.9195 -1.1160 5.3196 40 1 3.3441 -0.8754 6.1122 41 1 6.3070 -3.3510 8.7561 42 1 3.6654 -2.5690 10.0705 43 1 3.9191 -3.9796 9.0148 44 1 5.5903 -4.8777 10.6032 45 1 4.0289 -4.6148 11.4153 46 1 7.4702 -3.1948 10.9649 47 1 7.1814 -1.7926 12.0218 48 1 7.0743 -1.1541 9.6225 49 1 5.5015 -0.9246 10.4242 50 1 4.0891 -1.5685 11.9917 51 1 5.4466 -3.7562 15.1130 There are 81 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 81 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_15771252_484008.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:56:54 Heat of formation + Delta-G solvation = -165.264113 kcal Electronic energy + Delta-G solvation = -43894.482708 eV Core-core repulsion = 37967.112171 eV Total energy + Delta-G solvation = -5927.370537 eV No. of doubly occupied orbitals = 81 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 507.054 amu Computer time = 2.14 seconds Orbital eigenvalues (eV) -43.76614 -43.44530 -41.82271 -40.24266 -40.01607 -39.83103 -39.08144 -37.84528 -37.65313 -36.83676 -34.82148 -34.40505 -33.77125 -33.23797 -32.06999 -31.39787 -30.76783 -28.43704 -27.51637 -26.41448 -25.83496 -24.40347 -24.15019 -24.03917 -23.19694 -22.45261 -21.83391 -20.98526 -20.67703 -19.71414 -19.23085 -18.85623 -18.59593 -18.49017 -17.94915 -17.83690 -17.66596 -17.60677 -17.41175 -17.12339 -16.85581 -16.62900 -16.51004 -16.37189 -16.00669 -15.73041 -15.54978 -15.45301 -15.34398 -15.29455 -15.26758 -14.94992 -14.68405 -14.43523 -14.12090 -14.09220 -13.82956 -13.76620 -13.44729 -13.35998 -13.31921 -12.98378 -12.88229 -12.70162 -12.33364 -12.27761 -12.10367 -12.03727 -11.87175 -11.75020 -11.64228 -11.55558 -11.53452 -11.51821 -11.24331 -11.11446 -10.79875 -10.51499 -10.47999 -10.32071 -9.65387 -5.00427 -0.94690 -0.78277 -0.08228 0.30197 0.46847 0.85185 1.10469 1.16410 1.32208 1.33056 1.38679 1.62124 1.77111 1.89044 2.07689 2.18739 2.58476 2.76303 2.84346 3.01505 3.13460 3.36401 3.38424 3.44975 3.51847 3.64872 3.68699 3.74464 3.85242 3.89647 3.93776 3.97674 4.07947 4.13406 4.15676 4.15890 4.23662 4.26951 4.35833 4.51426 4.53372 4.56293 4.60098 4.68152 4.70814 4.76275 4.95735 4.97623 4.99316 5.02230 5.05052 5.18755 5.24661 5.32069 5.61598 5.72064 5.83322 6.19889 6.32054 6.61664 6.83089 7.04992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.567 6.567 2 C -0.072 4.072 3 Si 0.779 3.221 4 C -0.293 4.293 5 C 0.149 3.851 6 O -0.206 6.206 7 C 0.158 3.842 8 C -0.228 4.228 9 C -0.007 4.007 10 C -0.119 4.119 11 Br -0.019 7.019 12 C -0.002 4.002 13 C -0.097 4.097 14 C 0.119 3.881 15 O -0.348 6.348 16 C 0.473 3.527 17 O -0.529 6.529 18 C -0.077 4.077 19 C -0.106 4.106 20 C -0.109 4.109 21 C 0.126 3.874 22 C -0.108 4.108 23 C -0.099 4.099 24 N -0.700 5.700 25 C 0.705 3.295 26 O -0.585 6.585 27 N -0.677 5.677 28 C 0.537 3.463 29 O -0.484 6.484 30 C 0.425 3.575 31 O -0.485 6.485 32 H 0.403 0.597 33 H 0.074 0.926 34 H -0.260 1.260 35 H -0.265 1.265 36 H 0.219 0.781 37 H 0.148 0.852 38 H 0.185 0.815 39 H 0.099 0.901 40 H 0.098 0.902 41 H 0.143 0.857 42 H 0.073 0.927 43 H 0.105 0.895 44 H 0.110 0.890 45 H 0.085 0.915 46 H 0.108 0.892 47 H 0.081 0.919 48 H 0.084 0.916 49 H 0.071 0.929 50 H 0.447 0.553 51 H 0.438 0.562 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.245 2.890 -2.953 5.254 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.377 6.377 2 C -0.180 4.180 3 Si 0.679 3.321 4 C -0.296 4.296 5 C 0.084 3.916 6 O -0.109 6.109 7 C 0.113 3.887 8 C -0.231 4.231 9 C -0.027 4.027 10 C -0.199 4.199 11 Br 0.067 6.933 12 C -0.021 4.021 13 C -0.099 4.099 14 C 0.045 3.955 15 O -0.264 6.264 16 C 0.317 3.683 17 O -0.417 6.417 18 C -0.096 4.096 19 C -0.144 4.144 20 C -0.147 4.147 21 C 0.035 3.965 22 C -0.146 4.146 23 C -0.137 4.137 24 N -0.366 5.366 25 C 0.404 3.596 26 O -0.461 6.461 27 N -0.347 5.347 28 C 0.323 3.677 29 O -0.354 6.354 30 C 0.310 3.690 31 O -0.368 6.368 32 H 0.254 0.746 33 H 0.092 0.908 34 H -0.186 1.186 35 H -0.190 1.190 36 H 0.235 0.765 37 H 0.166 0.834 38 H 0.202 0.798 39 H 0.117 0.883 40 H 0.116 0.884 41 H 0.161 0.839 42 H 0.092 0.908 43 H 0.124 0.876 44 H 0.128 0.872 45 H 0.104 0.896 46 H 0.127 0.873 47 H 0.100 0.900 48 H 0.102 0.898 49 H 0.090 0.910 50 H 0.294 0.706 51 H 0.281 0.719 Dipole moment (debyes) X Y Z Total from point charges 3.688 2.439 -1.864 4.799 hybrid contribution -0.546 -0.041 -0.068 0.552 sum 3.143 2.398 -1.933 4.400 Atomic orbital electron populations 1.86444 1.17512 1.82836 1.50940 1.24799 0.85989 1.12268 0.94895 0.93029 0.78528 0.73875 0.86713 1.21274 1.11075 0.96037 1.01199 1.24104 0.88182 0.98065 0.81225 1.83127 1.68615 1.21177 1.37956 1.19019 0.95639 0.80191 0.93872 1.20703 1.08347 0.95605 0.98419 1.21130 0.92980 0.92913 0.95652 1.21896 1.06904 0.93183 0.97921 1.96857 1.97461 1.02828 1.96171 1.21294 0.91757 0.90512 0.98586 1.18864 1.03614 0.94261 0.93124 1.21493 1.00008 0.90683 0.83306 1.86395 1.69601 1.42074 1.28357 1.24190 0.73530 0.87132 0.83460 1.90727 1.53659 1.17495 1.79847 1.21315 1.00458 0.98486 0.89348 1.21547 0.95738 0.99897 0.97188 1.21722 1.02011 0.97022 0.93949 1.21262 0.91780 0.90153 0.93286 1.21696 0.95128 1.00237 0.97559 1.21401 1.01665 0.96885 0.93738 1.45596 1.46051 1.39219 1.05724 1.16015 0.79692 0.79843 0.84020 1.91069 1.44907 1.53391 1.56782 1.44399 1.41442 1.34825 1.14046 1.20885 0.78885 0.81873 0.86009 1.90871 1.31503 1.27717 1.85351 1.18691 0.76562 0.88810 0.84887 1.90724 1.36666 1.67358 1.42017 0.74601 0.90764 1.18622 1.18996 0.76533 0.83434 0.79827 0.88336 0.88408 0.83930 0.90826 0.87618 0.87155 0.89594 0.87332 0.90023 0.89762 0.90987 0.70553 0.71876 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.50 12.86 -148.98 -1.92 -3.42 16 2 C -0.07 -0.04 2.45 71.23 0.17 0.13 16 3 Si 0.78 -5.58 30.02 68.60 2.06 -3.52 16 4 C -0.29 -1.34 5.35 -19.78 -0.11 -1.45 16 5 C 0.15 -0.09 9.99 66.97 0.67 0.58 16 6 O -0.21 0.11 9.21 -2.78 -0.03 0.09 16 7 C 0.16 0.19 6.74 22.98 0.15 0.35 16 8 C -0.23 -1.26 5.89 -20.01 -0.12 -1.38 16 9 C -0.01 -0.03 9.40 22.45 0.21 0.18 16 10 C -0.12 -0.02 6.22 22.32 0.14 0.12 16 11 Br -0.02 0.01 33.69 -20.37 -0.69 -0.68 16 12 C 0.00 0.01 9.10 22.32 0.20 0.21 16 13 C -0.10 0.25 5.89 -19.78 -0.12 0.13 16 14 C 0.12 -0.56 5.38 71.24 0.38 -0.18 16 15 O -0.35 2.25 8.57 -51.40 -0.44 1.81 16 16 C 0.47 -2.63 7.26 71.24 0.52 -2.11 16 17 O -0.53 -0.68 15.73 22.00 0.35 -0.33 16 18 C -0.08 0.90 2.62 -11.53 -0.03 0.87 16 19 C -0.11 1.41 5.03 30.62 0.15 1.56 16 20 C -0.11 1.30 4.97 30.44 0.15 1.45 16 21 C 0.13 -1.07 0.83 2.59 0.00 -1.07 16 22 C -0.11 1.12 4.98 30.44 0.15 1.27 16 23 C -0.10 1.00 4.38 30.62 0.13 1.13 16 24 N -0.70 4.49 5.25 -442.70 -2.32 2.17 16 25 C 0.70 0.33 9.00 179.37 1.61 1.94 16 26 O -0.59 -5.75 18.04 -3.82 -0.07 -5.82 16 27 N -0.68 1.84 5.72 -441.15 -2.52 -0.68 16 28 C 0.54 -1.70 7.44 87.78 0.65 -1.05 16 29 O -0.48 -1.22 18.02 -2.90 -0.05 -1.27 16 30 C 0.42 4.21 6.98 25.67 0.18 4.39 16 31 O -0.49 -7.95 16.93 -5.07 -0.09 -8.04 16 32 H 0.40 -3.26 8.74 -74.06 -0.65 -3.91 16 33 H 0.07 0.06 7.96 -2.39 -0.02 0.04 16 34 H -0.26 1.11 6.91 99.48 0.69 1.79 16 35 H -0.26 1.06 7.11 99.48 0.71 1.77 16 36 H 0.22 -1.36 4.64 -2.91 -0.01 -1.38 16 37 H 0.15 0.77 7.81 -2.91 -0.02 0.74 16 38 H 0.18 -1.48 6.96 -2.91 -0.02 -1.50 16 39 H 0.10 -0.49 8.13 -2.39 -0.02 -0.51 16 40 H 0.10 -0.47 8.13 -2.39 -0.02 -0.49 16 41 H 0.14 -2.23 8.14 -2.39 -0.02 -2.25 16 42 H 0.07 -0.92 7.36 -2.39 -0.02 -0.94 16 43 H 0.11 -1.57 8.10 -2.39 -0.02 -1.59 16 44 H 0.11 -1.49 8.14 -2.39 -0.02 -1.51 16 45 H 0.09 -0.95 8.14 -2.39 -0.02 -0.97 16 46 H 0.11 -1.30 8.14 -2.38 -0.02 -1.32 16 47 H 0.08 -0.73 8.14 -2.39 -0.02 -0.75 16 48 H 0.08 -0.71 8.09 -2.39 -0.02 -0.73 16 49 H 0.07 -0.61 7.32 -2.38 -0.02 -0.63 16 50 H 0.45 -3.95 7.75 -92.71 -0.72 -4.67 16 51 H 0.44 -2.08 8.96 -92.71 -0.83 -2.91 16 Total: 0.00 -32.63 448.62 -1.68 -34.31 By element: Atomic # 1 Polarization: -20.61 SS G_CDS: -1.09 Total: -21.70 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: 5.12 Total: 7.09 kcal Atomic # 7 Polarization: 6.33 SS G_CDS: -4.84 Total: 1.49 kcal Atomic # 8 Polarization: -14.74 SS G_CDS: -2.24 Total: -16.98 kcal Atomic # 14 Polarization: -5.58 SS G_CDS: 2.06 Total: -3.52 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -32.63 -1.68 -34.31 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_15771252_484008.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.956 kcal (2) G-P(sol) polarization free energy of solvation -32.628 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.680 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.308 kcal (6) G-S(sol) free energy of system = (1) + (5) -165.264 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.14 seconds