Wall clock time and date at job start Sat Mar 6 2021 06:18:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86306 * 109.46717 * 2 1 4 4 C 1.50697 * 109.47136 * 119.99678 * 2 1 3 5 5 C 1.34540 * 120.20243 * 250.00542 * 4 2 1 6 6 O 1.33722 * 122.85867 * 179.97438 * 5 4 2 7 7 C 1.34872 * 122.40921 * 359.97438 * 6 5 4 8 8 C 1.38943 * 120.99358 * 179.97438 * 7 6 5 9 9 C 1.50694 * 120.03653 * 0.02562 * 8 7 6 10 10 O 1.45201 * 109.46916 * 179.97438 * 9 8 7 11 11 C 1.34225 * 117.00159 * 179.97438 * 10 9 8 12 12 O 1.20823 * 120.00036 * 0.02562 * 11 10 9 13 13 C 1.50702 * 120.00333 * 180.02562 * 11 10 9 14 14 H 1.09001 * 112.84929 * 48.80217 * 13 11 10 15 15 C 1.53779 * 113.61945 * 180.02562 * 13 11 10 16 16 C 1.53778 * 87.08378 * 139.98009 * 15 13 11 17 17 F 1.39894 * 113.61760 * 89.20221 * 16 15 13 18 18 C 1.50706 * 113.61164 * 220.02083 * 16 15 13 19 19 C 1.38217 * 119.98544 * 108.30886 * 18 16 15 20 20 C 1.38268 * 120.05151 * 179.72083 * 19 18 16 21 21 C 1.38177 * 120.02176 * 0.55236 * 20 19 18 22 22 C 1.38482 * 119.97736 * 359.72142 * 21 20 19 23 23 F 1.35094 * 120.02907 * 179.97438 * 22 21 20 24 24 C 1.38219 * 119.98813 * 288.57584 * 18 16 15 25 25 C 1.53779 * 87.08285 * 334.56760 * 16 15 13 26 26 C 1.37873 * 119.91813 * 180.27745 * 8 7 6 27 27 C 1.38791 * 120.70602 * 359.49051 * 26 8 7 28 28 Br 1.89098 * 119.86268 * 180.26076 * 27 26 8 29 29 C 1.37888 * 120.27297 * 0.50801 * 27 26 8 30 30 C 1.39348 * 119.52591 * 359.75206 * 29 27 26 31 31 C 1.41994 * 120.20415 * 69.98426 * 4 2 1 32 32 O 1.21919 * 121.40858 * 0.02562 * 31 4 2 33 33 H 0.96700 * 114.00039 * 60.00411 * 1 2 3 34 34 H 1.08993 * 109.47450 * 239.99795 * 2 1 3 35 35 H 1.48503 * 109.99900 * 298.67766 * 3 2 1 36 36 H 1.48493 * 110.00246 * 59.99834 * 3 2 1 37 37 H 1.08001 * 118.56978 * 359.94905 * 5 4 2 38 38 H 1.08994 * 109.47489 * 60.00073 * 9 8 7 39 39 H 1.09006 * 109.47195 * 299.99414 * 9 8 7 40 40 H 1.09009 * 113.61068 * 25.43018 * 15 13 11 41 41 H 1.08996 * 113.69264 * 254.54017 * 15 13 11 42 42 H 1.08006 * 119.97800 * 359.97438 * 19 18 16 43 43 H 1.07996 * 119.99045 * 180.27559 * 20 19 18 44 44 H 1.08001 * 120.01293 * 179.74994 * 21 20 19 45 45 H 1.08003 * 120.01083 * 359.97438 * 24 18 16 46 46 H 1.08993 * 113.61612 * 139.98182 * 25 16 15 47 47 H 1.09003 * 113.61264 * 270.88833 * 25 16 15 48 48 H 1.08005 * 119.64491 * 179.74803 * 26 8 7 49 49 H 1.08000 * 120.23988 * 179.76984 * 29 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.5318 -0.0168 2.2146 6 8 2.9966 -0.5924 3.3285 7 6 2.8980 -1.9188 3.5520 8 6 3.3919 -2.4861 4.7203 9 6 4.0491 -1.6174 5.7615 10 8 4.4764 -2.4403 6.8788 11 6 5.0851 -1.8149 7.8986 12 8 5.2548 -0.6193 7.8592 13 6 5.5568 -2.6039 9.0928 14 1 6.1319 -3.4875 8.8160 15 6 6.2322 -1.7423 10.1728 16 6 5.4990 -2.6082 11.2107 17 9 6.2171 -3.7435 11.6013 18 6 4.9627 -1.8238 12.3805 19 6 3.6017 -1.6198 12.5097 20 6 3.1078 -0.9053 13.5855 21 6 3.9752 -0.3847 14.5266 22 6 5.3394 -0.5836 14.3951 23 9 6.1885 -0.0746 15.3143 24 6 5.8323 -1.3041 13.3207 25 6 4.4492 -2.8855 10.1218 26 6 3.2844 -3.8456 4.9233 27 6 2.6770 -4.6579 3.9759 28 35 2.5359 -6.5185 4.2823 29 6 2.1805 -4.1144 2.8100 30 6 2.2881 -2.7424 2.5915 31 6 1.7734 -2.1156 1.3586 32 8 1.2345 -2.7765 0.4872 33 1 -0.3933 0.4416 -0.7651 34 1 1.7924 -0.5138 -0.8899 35 1 1.5878 2.4586 -1.2243 36 1 1.5613 2.4680 1.2084 37 1 2.6436 1.0513 2.0998 38 1 3.3379 -0.8697 6.1125 39 1 4.9147 -1.1189 5.3250 40 1 5.9091 -0.7013 10.1660 41 1 7.3166 -1.8488 10.2032 42 1 2.9233 -2.0223 11.7720 43 1 2.0439 -0.7503 13.6878 44 1 3.5895 0.1769 15.3646 45 1 6.8959 -1.4603 13.2174 46 1 4.0939 -3.9159 10.1100 47 1 3.6386 -2.1570 10.1011 48 1 3.6734 -4.2825 5.8312 49 1 1.7112 -4.7475 2.0715 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_16481938_484008.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:18:57 Heat of formation + Delta-G solvation = -148.595774 kcal Electronic energy + Delta-G solvation = -42364.394148 eV Core-core repulsion = 36294.366137 eV Total energy + Delta-G solvation = -6070.028010 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 507.030 amu Computer time = 1.74 seconds Orbital eigenvalues (eV) -49.89699 -48.96843 -43.33319 -42.02404 -40.57617 -40.03230 -39.84596 -38.73305 -37.90409 -37.45784 -34.70873 -33.73287 -33.17081 -32.68668 -31.71725 -30.70725 -28.93154 -27.50235 -27.42275 -27.34993 -25.83726 -24.45281 -24.27281 -23.70746 -22.48591 -22.00198 -20.87921 -20.58709 -19.68454 -19.33248 -18.74225 -18.57918 -18.49232 -17.98497 -17.67354 -17.58604 -17.51523 -17.24690 -16.96867 -16.69325 -16.58273 -16.53180 -16.30509 -16.10214 -16.06040 -15.77708 -15.57556 -15.47599 -15.18696 -15.04345 -14.96770 -14.63004 -14.45105 -14.33661 -14.17415 -14.01450 -13.85212 -13.81797 -13.53084 -13.38890 -13.14936 -12.96711 -12.84083 -12.74815 -12.68486 -12.64309 -12.31817 -12.09088 -11.88609 -11.82878 -11.68814 -11.49379 -11.46103 -11.05729 -10.66014 -10.53622 -10.41472 -10.20007 -9.84286 -9.55248 -5.24403 -0.80676 -0.68426 -0.08098 0.02861 0.04831 0.36835 0.92032 0.92943 0.99575 1.22383 1.31133 1.45802 1.69833 2.32577 2.35174 2.66791 2.71798 2.79598 2.82791 2.92816 3.03228 3.06659 3.21053 3.28365 3.31405 3.43584 3.58530 3.69132 3.73099 3.78771 3.80190 3.87846 3.90532 3.91608 3.98693 4.06229 4.11558 4.17976 4.22053 4.26597 4.27634 4.30170 4.47623 4.51422 4.56350 4.59217 4.60578 4.66967 4.80487 4.86911 4.94164 4.97100 5.01977 5.12523 5.16262 5.23522 5.71177 5.74633 6.33947 6.45369 6.49088 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.049 4.049 3 Si 0.671 3.329 4 C -0.265 4.265 5 C 0.140 3.860 6 O -0.211 6.211 7 C 0.163 3.837 8 C -0.106 4.106 9 C 0.117 3.883 10 O -0.352 6.352 11 C 0.479 3.521 12 O -0.494 6.494 13 C -0.108 4.108 14 H 0.137 0.863 15 C -0.129 4.129 16 C 0.139 3.861 17 F -0.175 7.175 18 C -0.080 4.080 19 C -0.114 4.114 20 C -0.088 4.088 21 C -0.144 4.144 22 C 0.102 3.898 23 F -0.135 7.135 24 C -0.131 4.131 25 C -0.137 4.137 26 C -0.012 4.012 27 C -0.120 4.120 28 Br -0.024 7.024 29 C 0.003 3.997 30 C -0.210 4.210 31 C 0.434 3.566 32 O -0.443 6.443 33 H 0.383 0.617 34 H 0.084 0.916 35 H -0.249 1.249 36 H -0.246 1.246 37 H 0.203 0.797 38 H 0.095 0.905 39 H 0.097 0.903 40 H 0.119 0.881 41 H 0.098 0.902 42 H 0.136 0.864 43 H 0.139 0.861 44 H 0.140 0.860 45 H 0.139 0.861 46 H 0.104 0.896 47 H 0.112 0.888 48 H 0.162 0.838 49 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.421 2.452 0.144 2.838 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.158 4.158 3 Si 0.571 3.429 4 C -0.267 4.267 5 C 0.075 3.925 6 O -0.114 6.114 7 C 0.117 3.883 8 C -0.108 4.108 9 C 0.044 3.956 10 O -0.269 6.269 11 C 0.321 3.679 12 O -0.380 6.380 13 C -0.127 4.127 14 H 0.155 0.845 15 C -0.166 4.166 16 C 0.121 3.879 17 F -0.155 7.155 18 C -0.080 4.080 19 C -0.132 4.132 20 C -0.106 4.106 21 C -0.163 4.163 22 C 0.083 3.917 23 F -0.114 7.114 24 C -0.150 4.150 25 C -0.175 4.175 26 C -0.032 4.032 27 C -0.200 4.200 28 Br 0.062 6.938 29 C -0.017 4.017 30 C -0.213 4.213 31 C 0.316 3.684 32 O -0.322 6.322 33 H 0.231 0.769 34 H 0.102 0.898 35 H -0.173 1.173 36 H -0.172 1.172 37 H 0.219 0.781 38 H 0.113 0.887 39 H 0.115 0.885 40 H 0.137 0.863 41 H 0.117 0.883 42 H 0.154 0.846 43 H 0.157 0.843 44 H 0.158 0.842 45 H 0.157 0.843 46 H 0.122 0.878 47 H 0.130 0.870 48 H 0.179 0.821 49 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 1.162 2.411 0.517 2.726 hybrid contribution -0.960 0.319 -0.669 1.213 sum 0.202 2.730 -0.152 2.742 Atomic orbital electron populations 1.86598 1.17341 1.80128 1.49656 1.24343 0.84902 1.09683 0.96855 0.95684 0.91144 0.74348 0.81742 1.20864 1.09762 0.96402 0.99706 1.23866 0.89222 0.97752 0.81690 1.83117 1.69007 1.21273 1.38038 1.18892 0.95566 0.80280 0.93572 1.18774 1.04425 0.94022 0.93557 1.21538 0.99974 0.90900 0.83208 1.86414 1.69815 1.42390 1.28267 1.23322 0.74439 0.87191 0.82975 1.90723 1.52305 1.15886 1.79124 1.22511 1.00007 1.00669 0.89484 0.84510 1.23666 1.02055 1.00462 0.90457 1.20261 0.92970 0.83631 0.91071 1.92937 1.78849 1.51485 1.92249 1.19506 0.93782 0.99156 0.95569 1.21156 0.94170 0.99111 0.98718 1.21063 1.00284 0.96128 0.93122 1.21322 0.91524 1.02054 1.01374 1.17653 0.87802 0.97702 0.88586 1.91541 1.70315 1.85030 1.64489 1.20959 1.01308 0.98845 0.93850 1.23663 0.96639 1.05610 0.91548 1.21049 0.92857 0.90866 0.98402 1.21838 1.07099 0.92834 0.98242 1.96850 1.97443 1.03206 1.96299 1.21140 0.92401 0.93121 0.95011 1.20709 1.07184 0.95019 0.98366 1.18231 0.77413 0.87879 0.84829 1.90760 1.34351 1.66461 1.40588 0.76892 0.89770 1.17266 1.17159 0.78127 0.88693 0.88536 0.86283 0.88326 0.84636 0.84309 0.84243 0.84281 0.87767 0.87007 0.82069 0.82654 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.85 12.86 -35.23 -0.45 -1.31 16 2 C -0.05 0.01 2.45 36.00 0.09 0.10 16 3 Si 0.67 -1.98 30.02 -169.99 -5.10 -7.08 16 4 C -0.26 -0.18 5.35 -104.49 -0.56 -0.74 16 5 C 0.14 -0.26 9.99 29.42 0.29 0.03 16 6 O -0.21 0.28 9.21 5.65 0.05 0.33 16 7 C 0.16 -0.02 6.74 -38.48 -0.26 -0.28 16 8 C -0.11 0.11 5.89 -104.50 -0.62 -0.51 16 9 C 0.12 -0.20 5.38 36.00 0.19 -0.01 16 10 O -0.35 0.55 8.68 -39.25 -0.34 0.21 16 11 C 0.48 -0.47 7.48 36.01 0.27 -0.20 16 12 O -0.49 -0.85 15.65 -18.75 -0.29 -1.14 16 13 C -0.11 0.31 4.24 -90.96 -0.39 -0.08 16 14 H 0.14 -0.57 8.14 -51.93 -0.42 -0.99 16 15 C -0.13 0.28 6.82 -25.92 -0.18 0.10 16 16 C 0.14 -0.23 1.79 -90.96 -0.16 -0.39 16 17 F -0.18 -0.08 17.22 2.25 0.04 -0.04 16 18 C -0.08 0.06 5.20 -104.63 -0.54 -0.48 16 19 C -0.11 0.21 9.10 -39.58 -0.36 -0.16 16 20 C -0.09 0.16 10.04 -39.59 -0.40 -0.24 16 21 C -0.14 0.07 10.03 -39.51 -0.40 -0.32 16 22 C 0.10 0.11 7.30 -39.42 -0.29 -0.18 16 23 F -0.14 -0.34 17.27 2.25 0.04 -0.30 16 24 C -0.13 -0.04 9.67 -39.52 -0.38 -0.42 16 25 C -0.14 0.47 6.30 -25.92 -0.16 0.31 16 26 C -0.01 0.01 9.10 -39.51 -0.36 -0.35 16 27 C -0.12 -0.02 6.22 -39.51 -0.25 -0.26 16 28 Br -0.02 0.00 33.69 -68.01 -2.29 -2.30 16 29 C 0.00 0.00 9.40 -39.30 -0.37 -0.37 16 30 C -0.21 -0.33 5.89 -104.84 -0.62 -0.94 16 31 C 0.43 1.39 6.98 -34.34 -0.24 1.15 16 32 O -0.44 -2.78 16.93 4.99 0.08 -2.69 16 33 H 0.38 -0.97 8.74 45.56 0.40 -0.57 16 34 H 0.08 -0.05 7.96 -51.93 -0.41 -0.46 16 35 H -0.25 0.13 7.11 56.52 0.40 0.53 16 36 H -0.25 0.30 6.91 56.52 0.39 0.69 16 37 H 0.20 -1.00 4.64 -52.49 -0.24 -1.24 16 38 H 0.10 -0.20 8.13 -51.93 -0.42 -0.62 16 39 H 0.10 -0.21 8.13 -51.93 -0.42 -0.63 16 40 H 0.12 -0.17 7.39 -51.92 -0.38 -0.56 16 41 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 42 H 0.14 -0.54 6.11 -52.48 -0.32 -0.86 16 43 H 0.14 -0.56 8.06 -52.49 -0.42 -0.98 16 44 H 0.14 -0.27 8.06 -52.49 -0.42 -0.70 16 45 H 0.14 -0.07 8.06 -52.48 -0.42 -0.49 16 46 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 47 H 0.11 -0.47 6.39 -51.93 -0.33 -0.81 16 48 H 0.16 -0.37 6.96 -52.48 -0.37 -0.74 16 49 H 0.16 0.19 7.81 -52.49 -0.41 -0.22 16 LS Contribution 447.77 15.07 6.75 6.75 Total: 0.00 -10.16 447.77 -11.85 -22.01 By element: Atomic # 1 Polarization: -5.55 SS G_CDS: -4.66 Total: -10.21 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: -5.68 Total: -4.23 kcal Atomic # 8 Polarization: -3.65 SS G_CDS: -0.95 Total: -4.60 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.08 Total: -0.34 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: -5.10 Total: -7.08 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -2.29 Total: -2.30 kcal Total LS contribution 6.75 Total: 6.75 kcal Total: -10.16 -11.85 -22.01 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_16481938_484008.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.585 kcal (2) G-P(sol) polarization free energy of solvation -10.155 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.741 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.855 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.010 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.596 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.74 seconds