Wall clock time and date at job start Sat Mar 6 2021 07:34:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 F 1.39899 * 109.47376 * 2 1 4 4 C 1.52998 * 109.47270 * 120.00394 * 2 1 3 5 5 C 1.53000 * 109.47087 * 179.97438 * 4 2 1 6 6 C 1.52999 * 109.47150 * 300.00042 * 5 4 2 7 7 H 1.09006 * 109.47034 * 300.00065 * 6 5 4 8 8 C 1.50693 * 109.47217 * 180.02562 * 6 5 4 9 9 O 1.20832 * 119.99989 * 359.97438 * 8 6 5 10 10 O 1.34231 * 120.00127 * 180.02562 * 8 6 5 11 11 C 1.45198 * 116.99996 * 179.97438 * 10 8 6 12 12 C 1.50701 * 109.47068 * 179.97438 * 11 10 8 13 13 C 1.38941 * 120.04103 * 179.97438 * 12 11 10 14 14 O 1.34882 * 120.98711 * 0.02562 * 13 12 11 15 15 C 1.33724 * 122.41014 * 180.02562 * 14 13 12 16 16 C 1.34536 * 122.85299 * 0.02562 * 15 14 13 17 17 C 1.50703 * 120.20136 * 179.97438 * 16 15 14 18 18 O 1.42899 * 109.46978 * 250.00303 * 17 16 15 19 19 Si 1.86303 * 109.47023 * 9.99753 * 17 16 15 20 20 C 1.42004 * 119.59836 * 359.97228 * 16 15 14 21 21 O 1.21912 * 121.40727 * 179.97438 * 20 16 15 22 22 C 1.40453 * 119.33657 * 180.02562 * 13 12 11 23 23 C 1.39342 * 120.23920 * 359.97438 * 22 13 12 24 24 C 1.37882 * 119.52568 * 0.02710 * 23 22 13 25 25 Br 1.89110 * 119.86249 * 179.97438 * 24 23 22 26 26 C 1.37866 * 120.04183 * 0.02957 * 12 11 10 27 27 C 1.53004 * 109.47449 * 59.99848 * 6 5 4 28 28 C 1.53000 * 109.47069 * 300.00202 * 27 6 5 29 29 H 1.09011 * 109.46739 * 299.99910 * 1 2 3 30 30 H 1.09001 * 109.47313 * 59.99722 * 1 2 3 31 31 H 1.08993 * 109.47577 * 180.02562 * 1 2 3 32 32 H 1.08998 * 109.46788 * 59.99592 * 4 2 1 33 33 H 1.09002 * 109.46879 * 299.99759 * 4 2 1 34 34 H 1.08999 * 109.46627 * 179.97438 * 5 4 2 35 35 H 1.08998 * 109.46732 * 59.99585 * 5 4 2 36 36 H 1.09005 * 109.47093 * 59.99857 * 11 10 8 37 37 H 1.09000 * 109.47309 * 299.99705 * 11 10 8 38 38 H 1.07998 * 118.57050 * 179.72392 * 15 14 13 39 39 H 1.08994 * 109.47020 * 130.00130 * 17 16 15 40 40 H 0.96702 * 113.99922 * 180.02562 * 18 17 16 41 41 H 1.48497 * 110.00083 * 178.68022 * 19 17 16 42 42 H 1.48496 * 110.00187 * 300.00239 * 19 17 16 43 43 H 1.07998 * 120.23707 * 180.02562 * 23 22 13 44 44 H 1.08005 * 119.64265 * 359.96931 * 26 12 11 45 45 H 1.08995 * 109.46719 * 59.99598 * 27 6 5 46 46 H 1.08997 * 109.47401 * 180.02562 * 27 6 5 47 47 H 1.09001 * 109.47233 * 300.00131 * 28 27 6 48 48 H 1.09001 * 109.47130 * 179.97438 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 9 1.9964 1.3190 0.0000 4 6 2.0400 -0.7213 1.2492 5 6 3.5700 -0.7219 1.2488 6 6 4.0795 -1.4434 -0.0005 7 1 3.7158 -2.4710 -0.0003 8 6 5.5864 -1.4445 -0.0006 9 8 6.1910 -0.9213 0.9055 10 8 6.2572 -2.0256 -1.0076 11 6 7.7072 -1.9882 -0.9421 12 6 8.2826 -2.6849 -2.1481 13 6 9.6599 -2.7765 -2.3072 14 8 10.5010 -2.2493 -1.3940 15 6 11.8305 -2.3206 -1.5188 16 6 12.4347 -2.9205 -2.5604 17 6 13.9388 -2.9656 -2.6411 18 8 14.3850 -2.1127 -3.6973 19 14 14.6650 -2.3860 -1.0263 20 6 11.6464 -3.5111 -3.5834 21 8 12.1592 -4.0627 -4.5420 22 6 10.1802 -3.4286 -3.4371 23 6 9.3220 -3.9780 -4.3876 24 6 7.9583 -3.8763 -4.2112 25 35 6.7849 -4.6178 -5.4956 26 6 7.4432 -3.2312 -3.0956 27 6 3.5695 -0.7221 -1.2498 28 6 2.0395 -0.7216 -1.2494 29 1 -0.3633 0.5139 0.8901 30 1 -0.3634 0.5139 -0.8900 31 1 -0.3634 -1.0276 0.0005 32 1 1.6766 -1.7489 1.2491 33 1 1.6767 -0.2075 2.1392 34 1 3.9333 -1.2354 2.1390 35 1 3.9337 0.3057 1.2486 36 1 8.0431 -2.4933 -0.0364 37 1 8.0435 -0.9515 -0.9260 38 1 12.4459 -1.8730 -0.7524 39 1 14.2616 -3.9878 -2.8386 40 1 15.3455 -2.0928 -3.8076 41 1 16.1473 -2.4559 -1.0818 42 1 14.2324 -0.9935 -0.7456 43 1 9.7222 -4.4797 -5.2562 44 1 6.3733 -3.1570 -2.9677 45 1 3.9331 0.3054 -1.2499 46 1 3.9320 -1.2364 -2.1398 47 1 1.6757 -1.7491 -1.2491 48 1 1.6761 -0.2073 -2.1391 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_16716258_484008.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:34:29 Heat of formation + Delta-G solvation = -182.626208 kcal Electronic energy + Delta-G solvation = -36683.847835 eV Core-core repulsion = 31439.165073 eV Total energy + Delta-G solvation = -5244.682762 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 455.056 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -48.64455 -43.30588 -41.83740 -40.01277 -39.88665 -38.91154 -37.90000 -37.52499 -34.69243 -33.88625 -33.55932 -33.09349 -32.12030 -30.68535 -29.00482 -27.80225 -27.47886 -25.84456 -24.36596 -24.11698 -23.93512 -22.40676 -21.76405 -20.83454 -20.57331 -19.54616 -18.83823 -18.68530 -18.43795 -17.91756 -17.78398 -17.50181 -16.98692 -16.63024 -16.59209 -16.43785 -16.23999 -16.13313 -15.74945 -15.56190 -15.32668 -15.20649 -15.16545 -14.77675 -14.51251 -14.44082 -14.23603 -13.95438 -13.92601 -13.82722 -13.67968 -13.36329 -13.27345 -13.22070 -13.00912 -12.93255 -12.72949 -12.60591 -12.28971 -12.21016 -12.06812 -11.93592 -11.79545 -11.69095 -11.45418 -11.26021 -11.14533 -11.03453 -10.63917 -10.51616 -10.38626 -9.52862 -5.22544 -0.78165 -0.66010 0.05413 0.38198 0.94676 1.01625 1.08801 1.32534 1.33320 1.48197 1.71709 2.34944 2.74141 2.86654 3.05206 3.22578 3.24016 3.29877 3.41696 3.46256 3.57565 3.63013 3.67025 3.73236 3.75767 3.83193 3.86160 3.95072 4.04487 4.06208 4.08869 4.11369 4.24281 4.24800 4.31122 4.41206 4.52681 4.55902 4.56368 4.58002 4.64707 4.69111 4.80800 4.82746 4.84085 4.94250 5.01050 5.03386 5.04572 5.06997 5.23584 5.32039 5.77396 6.35859 6.47464 6.60753 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C 0.114 3.886 3 F -0.207 7.207 4 C -0.138 4.138 5 C -0.108 4.108 6 C -0.078 4.078 7 H 0.114 0.886 8 C 0.470 3.530 9 O -0.497 6.497 10 O -0.355 6.355 11 C 0.117 3.883 12 C -0.105 4.105 13 C 0.162 3.838 14 O -0.211 6.211 15 C 0.140 3.860 16 C -0.265 4.265 17 C -0.048 4.048 18 O -0.530 6.530 19 Si 0.671 3.329 20 C 0.435 3.565 21 O -0.443 6.443 22 C -0.210 4.210 23 C 0.003 3.997 24 C -0.120 4.120 25 Br -0.025 7.025 26 C -0.012 4.012 27 C -0.115 4.115 28 C -0.137 4.137 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.076 0.924 32 H 0.085 0.915 33 H 0.083 0.917 34 H 0.080 0.920 35 H 0.080 0.920 36 H 0.096 0.904 37 H 0.094 0.906 38 H 0.203 0.797 39 H 0.084 0.916 40 H 0.383 0.617 41 H -0.249 1.249 42 H -0.246 1.246 43 H 0.156 0.844 44 H 0.161 0.839 45 H 0.076 0.924 46 H 0.084 0.916 47 H 0.086 0.914 48 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.020 -2.349 4.165 5.656 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.096 3.904 3 F -0.187 7.187 4 C -0.175 4.175 5 C -0.145 4.145 6 C -0.097 4.097 7 H 0.131 0.869 8 C 0.313 3.687 9 O -0.383 6.383 10 O -0.272 6.272 11 C 0.044 3.956 12 C -0.106 4.106 13 C 0.117 3.883 14 O -0.114 6.114 15 C 0.075 3.925 16 C -0.268 4.268 17 C -0.158 4.158 18 O -0.337 6.337 19 Si 0.571 3.429 20 C 0.317 3.683 21 O -0.322 6.322 22 C -0.213 4.213 23 C -0.017 4.017 24 C -0.200 4.200 25 Br 0.061 6.939 26 C -0.032 4.032 27 C -0.152 4.152 28 C -0.175 4.175 29 H 0.088 0.912 30 H 0.088 0.912 31 H 0.095 0.905 32 H 0.103 0.897 33 H 0.101 0.899 34 H 0.098 0.902 35 H 0.099 0.901 36 H 0.114 0.886 37 H 0.112 0.888 38 H 0.219 0.781 39 H 0.102 0.898 40 H 0.231 0.769 41 H -0.173 1.173 42 H -0.172 1.172 43 H 0.173 0.827 44 H 0.179 0.821 45 H 0.095 0.905 46 H 0.103 0.897 47 H 0.105 0.895 48 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -3.184 -1.940 3.960 5.439 hybrid contribution 1.331 0.489 -0.802 1.629 sum -1.854 -1.451 3.158 3.939 Atomic orbital electron populations 1.22380 0.93309 1.03743 1.03791 1.20972 0.94561 0.78335 0.96570 1.92860 1.90271 1.37948 1.97643 1.22149 0.95687 1.01965 0.97748 1.21454 0.94759 1.02227 0.96076 1.21177 0.86361 1.03470 0.98723 0.86857 1.23747 0.91511 0.74478 0.79000 1.90717 1.70289 1.41492 1.35817 1.86400 1.21021 1.72120 1.47640 1.21512 0.76781 1.01618 0.95731 1.18791 0.88573 1.04567 0.98715 1.18901 0.88438 0.93416 0.87574 1.83124 1.16070 1.66738 1.45478 1.23867 0.79863 0.91342 0.97431 1.20864 0.97176 1.09587 0.99163 1.24344 0.92010 0.98404 1.01009 1.86601 1.27501 1.67323 1.52291 0.95684 0.82726 0.84100 0.80401 1.18228 0.86286 0.78258 0.85545 1.90756 1.75191 1.36059 1.30200 1.20706 0.97103 1.06471 0.97010 1.21129 0.90459 0.92786 0.97343 1.21829 0.94102 1.06232 0.97843 1.96843 1.60998 1.82821 1.53224 1.21038 1.01440 0.91183 0.89524 1.21542 0.95676 1.01730 0.96264 1.22140 0.95483 1.02098 0.97746 0.91196 0.91192 0.90514 0.89673 0.89865 0.90163 0.90111 0.88637 0.88758 0.78133 0.89780 0.76907 1.17276 1.17160 0.82663 0.82108 0.90510 0.89705 0.89509 0.89876 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.43 8.93 37.16 0.33 0.76 16 2 C 0.11 -0.17 1.23 -90.62 -0.11 -0.28 16 3 F -0.21 -0.38 15.77 2.25 0.04 -0.34 16 4 C -0.14 0.32 5.00 -26.73 -0.13 0.19 16 5 C -0.11 0.12 4.37 -26.73 -0.12 0.00 16 6 C -0.08 0.15 2.63 -91.77 -0.24 -0.09 16 7 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 8 C 0.47 0.13 7.26 36.00 0.26 0.39 16 9 O -0.50 -1.62 15.73 -18.75 -0.30 -1.91 16 10 O -0.35 0.24 8.58 -39.26 -0.34 -0.10 16 11 C 0.12 -0.10 5.38 36.01 0.19 0.09 16 12 C -0.10 0.05 5.89 -104.50 -0.62 -0.57 16 13 C 0.16 0.07 6.74 -38.49 -0.26 -0.19 16 14 O -0.21 0.16 9.21 5.62 0.05 0.21 16 15 C 0.14 -0.20 9.99 29.42 0.29 0.09 16 16 C -0.27 -0.28 5.35 -104.49 -0.56 -0.84 16 17 C -0.05 0.00 2.45 36.01 0.09 0.08 16 18 O -0.53 -1.02 12.86 -35.23 -0.45 -1.48 16 19 Si 0.67 -1.77 30.02 -169.99 -5.10 -6.88 16 20 C 0.43 1.54 6.98 -34.33 -0.24 1.31 16 21 O -0.44 -2.91 16.93 5.00 0.08 -2.83 16 22 C -0.21 -0.41 5.89 -104.84 -0.62 -1.03 16 23 C 0.00 0.00 9.40 -39.30 -0.37 -0.37 16 24 C -0.12 -0.05 6.22 -39.51 -0.25 -0.30 16 25 Br -0.02 -0.01 33.69 -68.01 -2.29 -2.30 16 26 C -0.01 0.01 9.10 -39.51 -0.36 -0.35 16 27 C -0.11 0.25 5.02 -26.73 -0.13 0.12 16 28 C -0.14 0.39 5.00 -26.73 -0.13 0.25 16 29 H 0.07 -0.14 8.14 -51.92 -0.42 -0.57 16 30 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 32 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 33 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 34 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 35 H 0.08 0.07 7.76 -51.93 -0.40 -0.33 16 36 H 0.10 -0.13 8.13 -51.93 -0.42 -0.55 16 37 H 0.09 -0.08 8.13 -51.93 -0.42 -0.50 16 38 H 0.20 -0.90 4.64 -52.49 -0.24 -1.15 16 39 H 0.08 -0.03 7.96 -51.93 -0.41 -0.44 16 40 H 0.38 -0.86 8.74 45.56 0.40 -0.46 16 41 H -0.25 0.07 7.11 56.52 0.40 0.47 16 42 H -0.25 0.21 6.91 56.52 0.39 0.60 16 43 H 0.16 0.23 7.81 -52.49 -0.41 -0.18 16 44 H 0.16 -0.31 6.96 -52.48 -0.37 -0.67 16 45 H 0.08 -0.05 7.80 -51.93 -0.41 -0.45 16 46 H 0.08 -0.27 8.11 -51.93 -0.42 -0.69 16 47 H 0.09 -0.38 8.14 -51.93 -0.42 -0.81 16 48 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 LS Contribution 418.91 15.07 6.31 6.31 Total: 0.00 -9.36 418.91 -11.08 -20.44 By element: Atomic # 1 Polarization: -4.29 SS G_CDS: -6.12 Total: -10.40 kcal Atomic # 6 Polarization: 2.24 SS G_CDS: -2.97 Total: -0.72 kcal Atomic # 8 Polarization: -5.16 SS G_CDS: -0.95 Total: -6.11 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.10 Total: -6.88 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -2.29 Total: -2.30 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -9.36 -11.08 -20.44 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_16716258_484008.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -162.186 kcal (2) G-P(sol) polarization free energy of solvation -9.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -171.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.081 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.441 kcal (6) G-S(sol) free energy of system = (1) + (5) -182.626 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds