Wall clock time and date at job start Sat Mar 6 2021 08:59:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34754 * 116.99871 * 2 1 4 4 O 1.21522 * 119.99640 * 359.97438 * 3 2 1 5 5 C 1.47382 * 119.99944 * 179.97438 * 3 2 1 6 6 C 1.36675 * 125.77790 * 179.97438 * 5 3 2 7 7 N 1.34784 * 106.83330 * 179.97438 * 6 5 3 8 8 C 1.46499 * 126.58689 * 179.97438 * 7 6 5 9 9 H 1.08998 * 112.84860 * 145.33969 * 8 7 6 10 10 C 1.53781 * 113.61204 * 276.53233 * 8 7 6 11 11 C 1.53779 * 87.08104 * 89.11607 * 10 8 7 12 12 H 1.09007 * 113.61184 * 270.88110 * 11 10 8 13 13 C 1.50699 * 113.61846 * 140.06252 * 11 10 8 14 14 O 1.20829 * 119.99858 * 0.02562 * 13 11 10 15 15 O 1.34229 * 120.00360 * 180.02562 * 13 11 10 16 16 C 1.45195 * 117.00102 * 180.02562 * 15 13 11 17 17 C 1.50703 * 109.47308 * 179.97438 * 16 15 13 18 18 C 1.38934 * 120.03973 * 179.97438 * 17 16 15 19 19 O 1.34880 * 120.99075 * 0.02910 * 18 17 16 20 20 C 1.33712 * 122.41222 * 180.02562 * 19 18 17 21 21 C 1.34541 * 122.85724 * 359.95708 * 20 19 18 22 22 C 1.50693 * 120.20224 * 180.02562 * 21 20 19 23 23 O 1.42900 * 109.47587 * 249.98158 * 22 21 20 24 24 Si 1.86304 * 109.47328 * 9.98116 * 22 21 20 25 25 C 1.41998 * 119.59492 * 0.02562 * 21 20 19 26 26 O 1.21919 * 121.40873 * 179.97438 * 25 21 20 27 27 C 1.40453 * 119.33488 * 180.02562 * 18 17 16 28 28 C 1.39353 * 120.24255 * 359.97438 * 27 18 17 29 29 C 1.37886 * 119.52227 * 359.97438 * 28 27 18 30 30 Br 1.89096 * 119.86151 * 180.02562 * 29 28 27 31 31 C 1.37867 * 120.03807 * 359.72951 * 17 16 15 32 32 C 1.53774 * 113.61253 * 14.13844 * 8 7 6 33 33 N 1.40211 * 106.82609 * 0.02562 * 7 6 5 34 34 N 1.28756 * 108.38996 * 359.97438 * 33 7 6 35 35 H 1.09001 * 109.46947 * 180.02562 * 1 2 3 36 36 H 1.08998 * 109.47262 * 300.00767 * 1 2 3 37 37 H 1.09001 * 109.47021 * 60.00288 * 1 2 3 38 38 H 1.07988 * 126.58314 * 359.73918 * 6 5 3 39 39 H 1.08999 * 113.61522 * 203.66511 * 10 8 7 40 40 H 1.08996 * 113.61929 * 334.56583 * 10 8 7 41 41 H 1.09003 * 109.47324 * 300.00015 * 16 15 13 42 42 H 1.09008 * 109.47274 * 60.00173 * 16 15 13 43 43 H 1.08002 * 118.57237 * 179.97438 * 20 19 18 44 44 H 1.09001 * 109.47192 * 129.97766 * 22 21 20 45 45 H 0.96695 * 114.00606 * 180.02562 * 23 22 21 46 46 H 1.48503 * 109.99646 * 299.99929 * 24 22 21 47 47 H 1.48497 * 109.99883 * 61.31146 * 24 22 21 48 48 H 1.08001 * 120.23905 * 180.02562 * 28 27 18 49 49 H 1.08001 * 119.64661 * 359.96923 * 31 17 16 50 50 H 1.09004 * 113.61525 * 25.43533 * 32 8 7 51 51 H 1.09000 * 113.61695 * 156.33785 * 32 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0638 1.2007 0.0000 4 8 1.4019 2.2198 -0.0005 5 6 3.5356 1.2778 0.0006 6 6 4.2755 2.4270 0.0001 7 7 5.5715 2.0567 0.0015 8 6 6.7343 2.9479 0.0011 9 1 7.5724 2.5504 0.5734 10 6 7.1266 3.4480 -1.3992 11 6 6.1605 4.6213 -1.1649 12 1 5.1385 4.4156 -1.4834 13 6 6.6783 5.9411 -1.6758 14 8 7.7604 5.9994 -2.2103 15 8 5.9375 7.0518 -1.5373 16 6 6.4990 8.2873 -2.0534 17 6 5.5329 9.4182 -1.8106 18 6 5.8533 10.7066 -2.2200 19 8 7.0235 10.9683 -2.8375 20 6 7.3610 12.1970 -3.2428 21 6 6.5643 13.2673 -3.0695 22 6 7.0045 14.6258 -3.5507 23 8 7.2914 15.4596 -2.4262 24 14 8.5348 14.4478 -4.5982 25 6 5.3062 13.1089 -2.4304 26 8 4.5586 14.0560 -2.2559 27 6 4.9422 11.7496 -1.9858 28 6 3.7294 11.4924 -1.3494 29 6 3.4300 10.2066 -0.9517 30 35 1.7868 9.8467 -0.0880 31 6 4.3280 9.1746 -1.1864 32 6 6.3917 4.4075 0.3431 33 7 5.5931 0.6548 0.0022 34 7 4.3777 0.2298 0.0018 35 1 -0.3633 -1.0277 0.0005 36 1 -0.3634 0.5139 0.8899 37 1 -0.3633 0.5138 -0.8900 38 1 3.8949 3.4375 -0.0046 39 1 8.1706 3.7511 -1.4780 40 1 6.8166 2.7812 -2.2038 41 1 7.4406 8.4982 -1.5464 42 1 6.6775 8.1860 -3.1240 43 1 8.3143 12.3364 -3.7308 44 1 6.2088 15.0766 -4.1437 45 1 7.5810 16.3517 -2.6616 46 1 9.6273 13.8343 -3.8012 47 1 8.2412 13.6088 -5.7878 48 1 3.0288 12.2944 -1.1696 49 1 4.0816 8.1705 -0.8740 50 1 5.4888 4.5148 0.9443 51 1 7.2352 4.9726 0.7399 There are 83 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 83 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_16908666_484008.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:59:50 Heat of formation + Delta-G solvation = -58.876006 kcal Electronic energy + Delta-G solvation = -44553.421770 eV Core-core repulsion = 38437.012516 eV Total energy + Delta-G solvation = -6116.409254 eV No. of doubly occupied orbitals = 83 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 520.050 amu Computer time = 2.18 seconds Orbital eigenvalues (eV) -43.62568 -43.45530 -42.01420 -41.23676 -40.25297 -40.18953 -39.57217 -37.83207 -37.61781 -37.59594 -34.82320 -34.20611 -33.78612 -33.24970 -32.40490 -30.79720 -29.36875 -28.71215 -27.64412 -27.52330 -27.12443 -26.02691 -25.05344 -24.56330 -24.37716 -22.69963 -22.23872 -22.13243 -21.02616 -20.70316 -19.77595 -19.19524 -18.81212 -18.63328 -18.58887 -18.18799 -17.95624 -17.91215 -17.66852 -17.50398 -17.34145 -16.91183 -16.70100 -16.51754 -16.38787 -15.90890 -15.74516 -15.69722 -15.55132 -15.48464 -15.27354 -14.99276 -14.75420 -14.64837 -14.38732 -14.33952 -14.08150 -13.89683 -13.78537 -13.69994 -13.62376 -13.42954 -13.13723 -12.96521 -12.88928 -12.72180 -12.44406 -12.34243 -12.30211 -12.04031 -11.91345 -11.89858 -11.88165 -11.84906 -11.59204 -11.54082 -11.37002 -11.24409 -10.80815 -10.56740 -10.49747 -10.32385 -9.66603 -5.00761 -0.95920 -0.79532 -0.12080 -0.09281 0.29155 0.29695 0.77281 0.84007 0.97991 1.15949 1.28035 1.31049 1.59638 1.61627 1.76582 1.81763 2.17571 2.57324 2.74722 2.78321 2.99540 3.00140 3.05455 3.12017 3.21157 3.43263 3.50529 3.56931 3.64907 3.67252 3.69650 3.83777 3.86148 3.92194 3.95649 3.96609 4.05899 4.14563 4.17539 4.22499 4.26145 4.34355 4.37295 4.49616 4.51931 4.52646 4.57799 4.60065 4.64783 4.69789 4.73386 4.75919 4.88905 4.95849 5.18625 5.21717 5.33978 5.60524 6.19147 6.43989 6.53027 6.80230 6.82933 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.356 6.356 3 C 0.557 3.443 4 O -0.519 6.519 5 C -0.112 4.112 6 C 0.123 3.877 7 N -0.331 5.331 8 C 0.114 3.886 9 H 0.153 0.847 10 C -0.119 4.119 11 C -0.119 4.119 12 H 0.146 0.854 13 C 0.483 3.517 14 O -0.523 6.523 15 O -0.347 6.347 16 C 0.119 3.881 17 C -0.098 4.098 18 C 0.159 3.841 19 O -0.205 6.205 20 C 0.150 3.850 21 C -0.293 4.293 22 C -0.072 4.072 23 O -0.567 6.567 24 Si 0.779 3.221 25 C 0.425 3.575 26 O -0.485 6.485 27 C -0.228 4.228 28 C -0.006 4.006 29 C -0.120 4.120 30 Br -0.020 7.020 31 C -0.003 4.003 32 C -0.110 4.110 33 N -0.074 5.074 34 N -0.211 5.211 35 H 0.128 0.872 36 H 0.069 0.931 37 H 0.069 0.931 38 H 0.245 0.755 39 H 0.128 0.872 40 H 0.084 0.916 41 H 0.103 0.897 42 H 0.099 0.901 43 H 0.220 0.780 44 H 0.074 0.926 45 H 0.403 0.597 46 H -0.259 1.259 47 H -0.265 1.265 48 H 0.148 0.852 49 H 0.183 0.817 50 H 0.118 0.882 51 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.198 2.250 -1.685 5.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.271 6.271 3 C 0.400 3.600 4 O -0.407 6.407 5 C -0.249 4.249 6 C -0.035 4.035 7 N -0.114 5.114 8 C 0.014 3.986 9 H 0.170 0.830 10 C -0.158 4.158 11 C -0.138 4.138 12 H 0.163 0.837 13 C 0.327 3.673 14 O -0.411 6.411 15 O -0.264 6.264 16 C 0.045 3.955 17 C -0.099 4.099 18 C 0.114 3.886 19 O -0.108 6.108 20 C 0.085 3.915 21 C -0.295 4.295 22 C -0.179 4.179 23 O -0.377 6.377 24 Si 0.678 3.322 25 C 0.310 3.690 26 O -0.367 6.367 27 C -0.230 4.230 28 C -0.026 4.026 29 C -0.199 4.199 30 Br 0.066 6.934 31 C -0.023 4.023 32 C -0.148 4.148 33 N -0.055 5.055 34 N -0.085 5.085 35 H 0.146 0.854 36 H 0.088 0.912 37 H 0.088 0.912 38 H 0.261 0.739 39 H 0.146 0.854 40 H 0.102 0.898 41 H 0.121 0.879 42 H 0.117 0.883 43 H 0.235 0.765 44 H 0.092 0.908 45 H 0.254 0.746 46 H -0.185 1.185 47 H -0.191 1.191 48 H 0.166 0.834 49 H 0.200 0.800 50 H 0.137 0.863 51 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 5.736 0.427 -1.477 5.938 hybrid contribution -1.255 1.357 -0.124 1.852 sum 4.480 1.784 -1.601 5.081 Atomic orbital electron populations 1.23647 0.73705 1.05921 1.03125 1.86636 1.25523 1.31581 1.83362 1.19575 0.86487 0.81877 0.72080 1.90884 1.66044 1.36209 1.47558 1.20418 0.92473 0.90561 1.21474 1.23796 0.83220 1.01923 0.94575 1.50511 1.06430 1.07126 1.47307 1.22757 0.85871 0.89313 1.00695 0.82992 1.23422 1.02046 0.94486 0.95800 1.22981 1.03566 0.87848 0.99358 0.83682 1.23662 0.82557 0.85832 0.75283 1.90736 1.22926 1.86606 1.40870 1.86402 1.48921 1.16783 1.74251 1.21538 0.94391 0.78433 1.01132 1.18855 0.97225 0.90198 1.03639 1.18993 0.83379 0.93167 0.93105 1.83122 1.34143 1.29886 1.63670 1.24105 0.97414 0.80228 0.89790 1.21269 0.98630 0.97701 1.11945 1.24796 1.11011 0.87773 0.94368 1.86443 1.90201 1.28882 1.32179 0.93022 0.74128 0.88869 0.76173 1.18697 0.86428 0.86997 0.76839 1.90723 1.53318 1.42728 1.49972 1.20712 0.97868 0.95409 1.09053 1.21136 0.94263 0.96357 0.90875 1.21898 0.96315 0.95453 1.06279 1.96866 1.24008 1.95386 1.77154 1.21284 0.89227 1.00335 0.91410 1.23543 1.07019 0.91215 0.93044 1.82112 1.13099 0.87511 1.22744 1.74819 0.97275 1.26936 1.09467 0.85390 0.91228 0.91244 0.73868 0.85364 0.89771 0.87931 0.88348 0.76480 0.90815 0.74591 1.18489 1.19068 0.83433 0.79957 0.86321 0.84455 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.57 113.37 1.20 1.17 16 2 O -0.36 -2.20 10.57 -56.65 -0.60 -2.80 16 3 C 0.56 3.35 7.96 70.23 0.56 3.91 16 4 O -0.52 -3.94 16.65 19.77 0.33 -3.61 16 5 C -0.11 -0.42 7.02 40.79 0.29 -0.14 16 6 C 0.12 -0.57 9.41 83.87 0.79 0.22 16 7 N -0.33 1.43 3.81 -324.02 -1.24 0.19 16 8 C 0.11 -1.30 5.19 45.52 0.24 -1.06 16 9 H 0.15 -2.03 8.14 -2.39 -0.02 -2.05 16 10 C -0.12 1.22 7.20 31.12 0.22 1.45 16 11 C -0.12 1.42 3.84 -10.92 -0.04 1.38 16 12 H 0.15 -2.13 6.91 -2.38 -0.02 -2.15 16 13 C 0.48 -3.06 7.49 71.24 0.53 -2.52 16 14 O -0.52 -0.07 15.65 21.95 0.34 0.27 16 15 O -0.35 2.37 8.68 -51.41 -0.45 1.93 16 16 C 0.12 -0.62 5.38 71.24 0.38 -0.24 16 17 C -0.10 0.26 5.89 -19.78 -0.12 0.15 16 18 C 0.16 0.16 6.74 22.98 0.15 0.31 16 19 O -0.21 0.20 9.21 -2.67 -0.02 0.17 16 20 C 0.15 -0.15 9.99 66.97 0.67 0.52 16 21 C -0.29 -1.27 5.35 -19.78 -0.11 -1.37 16 22 C -0.07 -0.03 2.45 71.23 0.17 0.15 16 23 O -0.57 -1.34 12.86 -148.98 -1.92 -3.26 16 24 Si 0.78 -5.75 30.02 68.60 2.06 -3.69 16 25 C 0.42 4.16 6.98 25.67 0.18 4.33 16 26 O -0.49 -7.93 16.93 -5.05 -0.09 -8.01 16 27 C -0.23 -1.24 5.89 -20.00 -0.12 -1.36 16 28 C -0.01 -0.03 9.40 22.45 0.21 0.18 16 29 C -0.12 -0.06 6.22 22.32 0.14 0.08 16 30 Br -0.02 -0.01 33.69 -20.37 -0.69 -0.69 16 31 C 0.00 0.01 9.10 22.32 0.20 0.21 16 32 C -0.11 1.72 6.91 31.21 0.22 1.94 16 33 N -0.07 -0.35 13.78 37.02 0.51 0.16 16 34 N -0.21 -1.70 12.39 -50.03 -0.62 -2.32 16 35 H 0.13 -0.73 8.14 -2.39 -0.02 -0.75 16 36 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 37 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 38 H 0.25 -3.21 6.75 -2.92 -0.02 -3.23 16 39 H 0.13 -1.25 7.44 -2.39 -0.02 -1.27 16 40 H 0.08 -0.64 8.14 -2.39 -0.02 -0.66 16 41 H 0.10 -0.63 8.13 -2.39 -0.02 -0.65 16 42 H 0.10 -0.53 8.14 -2.38 -0.02 -0.55 16 43 H 0.22 -1.46 4.64 -2.91 -0.01 -1.47 16 44 H 0.07 0.06 7.96 -2.39 -0.02 0.04 16 45 H 0.40 -3.36 8.74 -74.06 -0.65 -4.01 16 46 H -0.26 1.21 6.91 99.48 0.69 1.89 16 47 H -0.27 1.10 7.11 99.48 0.71 1.80 16 48 H 0.15 0.80 7.81 -2.91 -0.02 0.77 16 49 H 0.18 -1.37 6.96 -2.91 -0.02 -1.39 16 50 H 0.12 -2.18 7.11 -2.39 -0.02 -2.20 16 51 H 0.14 -2.41 8.10 -2.39 -0.02 -2.43 16 Total: 0.00 -34.74 466.62 3.85 -30.89 By element: Atomic # 1 Polarization: -18.98 SS G_CDS: 0.45 Total: -18.54 kcal Atomic # 6 Polarization: 3.53 SS G_CDS: 5.77 Total: 9.30 kcal Atomic # 7 Polarization: -0.62 SS G_CDS: -1.35 Total: -1.97 kcal Atomic # 8 Polarization: -12.91 SS G_CDS: -2.40 Total: -15.31 kcal Atomic # 14 Polarization: -5.75 SS G_CDS: 2.06 Total: -3.69 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -0.69 Total: -0.69 kcal Total: -34.74 3.85 -30.89 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_16908666_484008.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.985 kcal (2) G-P(sol) polarization free energy of solvation -34.740 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.725 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.849 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.891 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.876 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.18 seconds