Wall clock time and date at job start Sat Mar 6 2021 05:14:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47159 * 2 1 4 4 C 1.50697 * 109.47300 * 120.00065 * 2 1 3 5 5 C 1.34539 * 120.20876 * 249.98106 * 4 2 1 6 6 O 1.33717 * 122.85829 * 180.02562 * 5 4 2 7 7 C 1.34877 * 122.40678 * 359.95656 * 6 5 4 8 8 C 1.40421 * 119.68040 * 0.03873 * 7 6 5 9 9 C 1.39392 * 120.23928 * 179.97438 * 8 7 6 10 10 C 1.37850 * 119.52259 * 0.02562 * 9 8 7 11 11 Br 1.89098 * 119.86080 * 179.97438 * 10 9 8 12 12 C 1.38837 * 120.27513 * 359.76545 * 10 9 8 13 13 C 1.37823 * 120.70329 * 0.49463 * 12 10 9 14 14 C 1.50701 * 120.04012 * 179.75917 * 13 12 10 15 15 O 1.45202 * 109.46859 * 359.72999 * 14 13 12 16 16 C 1.34230 * 116.99836 * 180.02562 * 15 14 13 17 17 O 1.20833 * 119.99930 * 359.97438 * 16 15 14 18 18 C 1.50697 * 120.00262 * 180.27336 * 16 15 14 19 19 H 1.09001 * 112.84537 * 310.91653 * 18 16 15 20 20 C 1.53781 * 113.61690 * 82.22057 * 18 16 15 21 21 C 1.53780 * 87.08329 * 139.98387 * 20 18 16 22 22 H 1.08997 * 113.69045 * 89.12848 * 21 20 18 23 23 N 1.46498 * 113.61732 * 220.02019 * 21 20 18 24 24 C 1.35488 * 126.97835 * 37.18299 * 23 21 20 25 25 N 1.30523 * 107.30935 * 179.83966 * 24 23 21 26 26 N 1.28596 * 109.66918 * 0.43600 * 25 24 23 27 27 C 1.30519 * 109.67086 * 359.72478 * 26 25 24 28 28 C 1.53776 * 113.61980 * 179.72212 * 18 16 15 29 29 C 1.42006 * 120.20372 * 69.99754 * 4 2 1 30 30 O 1.21919 * 121.40509 * 359.95638 * 29 4 2 31 31 H 0.96699 * 114.00211 * 59.99737 * 1 2 3 32 32 H 1.08996 * 109.47150 * 240.00196 * 2 1 3 33 33 H 1.48501 * 110.00165 * 298.68285 * 3 2 1 34 34 H 1.48496 * 109.99845 * 60.00185 * 3 2 1 35 35 H 1.08008 * 118.56898 * 0.02562 * 5 4 2 36 36 H 1.08000 * 120.23765 * 180.02562 * 9 8 7 37 37 H 1.07998 * 119.64213 * 180.27626 * 12 10 9 38 38 H 1.08998 * 109.47259 * 239.72454 * 14 13 12 39 39 H 1.09004 * 109.46840 * 119.72234 * 14 13 12 40 40 H 1.09001 * 113.61447 * 254.53769 * 20 18 16 41 41 H 1.08998 * 113.61228 * 25.43144 * 20 18 16 42 42 H 1.08009 * 126.34882 * 359.97438 * 24 23 21 43 43 H 1.08010 * 126.34644 * 179.97438 * 27 26 25 44 44 H 1.09004 * 113.60893 * 334.56445 * 28 18 16 45 45 H 1.08995 * 113.61655 * 105.46778 * 28 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.5323 -0.0171 2.2144 6 8 2.9980 -0.5930 3.3278 7 6 2.8996 -1.9196 3.5508 8 6 2.2899 -2.7428 2.5905 9 6 2.1825 -4.1154 2.8088 10 6 2.6786 -4.6586 3.9745 11 35 2.5374 -6.5193 4.2809 12 6 3.2855 -3.8460 4.9227 13 6 3.3925 -2.4870 4.7198 14 6 4.0493 -1.6181 5.7614 15 8 4.4766 -2.4412 6.8787 16 6 5.0839 -1.8155 7.8992 17 8 5.2532 -0.6198 7.8600 18 6 5.5606 -2.6053 9.0908 19 1 4.7987 -3.2775 9.4853 20 6 6.9272 -3.2775 8.8777 21 6 7.2576 -2.8866 10.3279 22 1 6.9613 -3.6360 11.0618 23 7 8.6354 -2.4240 10.5117 24 6 9.3645 -1.6729 9.6515 25 7 10.5345 -1.4823 10.1979 26 7 10.5813 -2.0749 11.3383 27 6 9.4414 -2.6654 11.5737 28 6 6.2403 -1.7444 10.1687 29 6 1.7737 -2.1159 1.3583 30 8 1.2339 -2.7765 0.4873 31 1 -0.3933 0.4417 -0.7650 32 1 1.7923 -0.5138 -0.8900 33 1 1.5879 2.4586 -1.2242 34 1 1.5615 2.4678 1.2085 35 1 2.6434 1.0512 2.1001 36 1 1.7139 -4.7486 2.0700 37 1 3.6746 -4.2830 5.8304 38 1 3.3378 -0.8705 6.1120 39 1 4.9150 -1.1196 5.3253 40 1 6.8643 -4.3541 8.7191 41 1 7.5500 -2.7754 8.1374 42 1 9.0375 -1.2990 8.6924 43 1 9.1877 -3.2403 12.4522 44 1 6.6754 -0.8231 9.7813 45 1 5.6228 -1.5833 11.0523 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_17311050_484008.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:14:11 Heat of formation + Delta-G solvation = 3.202603 kcal Electronic energy + Delta-G solvation = -36191.055189 eV Core-core repulsion = 30998.466009 eV Total energy + Delta-G solvation = -5192.589180 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 462.035 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -44.10506 -43.34638 -41.93357 -40.16496 -40.10039 -39.46514 -37.96267 -37.55427 -34.76283 -34.51150 -33.72514 -33.17612 -31.55582 -30.73025 -28.98095 -27.50199 -27.40190 -26.93442 -25.86701 -24.42132 -24.26034 -23.32047 -22.54690 -22.09314 -20.75165 -20.36193 -19.66614 -19.29473 -18.74920 -18.57034 -18.25501 -17.87885 -17.44057 -17.22246 -16.91683 -16.74160 -16.50741 -16.41907 -16.24428 -15.91096 -15.79133 -15.56989 -15.41890 -15.39043 -15.02122 -14.91347 -14.45496 -14.12041 -14.03905 -13.82672 -13.80904 -13.64578 -13.31178 -12.97688 -12.93037 -12.66848 -12.58329 -12.26986 -12.07865 -12.00416 -11.98868 -11.81196 -11.52809 -11.49382 -11.30981 -11.19306 -10.93704 -10.69667 -10.51148 -10.45360 -10.41768 -9.58583 -5.01934 -0.85478 -0.70516 0.02509 0.34466 0.88026 0.95803 1.06762 1.14711 1.28916 1.39534 1.52035 1.68864 1.87660 1.94021 2.25698 2.67180 2.84384 3.04496 3.11623 3.23279 3.29379 3.44926 3.48382 3.55944 3.65566 3.71437 3.73106 3.83737 3.88564 3.90485 3.97365 4.08851 4.14186 4.19432 4.21649 4.32185 4.42278 4.46916 4.56142 4.57500 4.62219 4.65238 4.76093 4.78252 4.86696 4.91406 5.03309 5.13162 5.27251 5.30162 5.73498 6.01203 6.29304 6.51135 6.61417 7.75937 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.076 4.076 3 Si 0.781 3.219 4 C -0.298 4.298 5 C 0.169 3.831 6 O -0.201 6.201 7 C 0.163 3.837 8 C -0.227 4.227 9 C -0.009 4.009 10 C -0.121 4.121 11 Br -0.023 7.023 12 C -0.004 4.004 13 C -0.097 4.097 14 C 0.118 3.882 15 O -0.348 6.348 16 C 0.477 3.523 17 O -0.529 6.529 18 C -0.096 4.096 19 H 0.171 0.829 20 C -0.124 4.124 21 C 0.113 3.887 22 H 0.176 0.824 23 N -0.461 5.461 24 C 0.159 3.841 25 N -0.353 5.353 26 N -0.359 5.359 27 C 0.167 3.833 28 C -0.131 4.131 29 C 0.424 3.576 30 O -0.495 6.495 31 H 0.395 0.605 32 H 0.075 0.925 33 H -0.282 1.282 34 H -0.259 1.259 35 H 0.238 0.762 36 H 0.144 0.856 37 H 0.182 0.818 38 H 0.099 0.901 39 H 0.104 0.896 40 H 0.123 0.877 41 H 0.090 0.910 42 H 0.235 0.765 43 H 0.258 0.742 44 H 0.084 0.916 45 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.013 -0.636 2.979 3.651 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.181 4.181 3 Si 0.681 3.319 4 C -0.300 4.300 5 C 0.104 3.896 6 O -0.103 6.103 7 C 0.117 3.883 8 C -0.230 4.230 9 C -0.029 4.029 10 C -0.200 4.200 11 Br 0.063 6.937 12 C -0.024 4.024 13 C -0.098 4.098 14 C 0.044 3.956 15 O -0.264 6.264 16 C 0.321 3.679 17 O -0.417 6.417 18 C -0.115 4.115 19 H 0.188 0.812 20 C -0.162 4.162 21 C 0.010 3.990 22 H 0.194 0.806 23 N -0.151 5.151 24 C -0.130 4.130 25 N -0.191 5.191 26 N -0.197 5.197 27 C -0.122 4.122 28 C -0.169 4.169 29 C 0.310 3.690 30 O -0.379 6.379 31 H 0.245 0.755 32 H 0.093 0.907 33 H -0.209 1.209 34 H -0.185 1.185 35 H 0.253 0.747 36 H 0.162 0.838 37 H 0.199 0.801 38 H 0.117 0.883 39 H 0.122 0.878 40 H 0.141 0.859 41 H 0.108 0.892 42 H 0.251 0.749 43 H 0.274 0.726 44 H 0.102 0.898 45 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -0.892 -0.215 3.520 3.637 hybrid contribution -2.850 -0.173 -1.699 3.323 sum -3.742 -0.388 1.821 4.180 Atomic orbital electron populations 1.86544 1.18805 1.81056 1.50651 1.24937 0.84131 1.12799 0.96275 0.94488 0.89073 0.69458 0.78902 1.20961 1.12058 0.95526 1.01455 1.24378 0.86339 0.98700 0.80189 1.83167 1.68362 1.20680 1.38121 1.18946 0.95312 0.80511 0.93522 1.20708 1.08270 0.95476 0.98509 1.21117 0.93101 0.93150 0.95552 1.21875 1.07106 0.93000 0.98062 1.96848 1.97472 1.03254 1.96174 1.21262 0.91926 0.90688 0.98485 1.18850 1.03717 0.94106 0.93166 1.21555 1.00307 0.90656 0.83068 1.86402 1.69625 1.42185 1.28215 1.23906 0.73474 0.86983 0.83539 1.90743 1.53653 1.17529 1.79802 1.22460 0.99468 0.99083 0.90463 0.81154 1.23438 0.93081 1.04589 0.95096 1.23514 0.75555 0.98910 1.00974 0.80635 1.46659 1.14393 1.38729 1.15285 1.26765 0.89024 0.97332 0.99924 1.74204 1.19635 1.20984 1.04315 1.74184 1.21970 1.13035 1.10539 1.27311 0.87176 1.02183 0.95492 1.23495 0.96726 0.97405 0.99318 1.18765 0.76391 0.89108 0.84728 1.90724 1.37227 1.67609 1.42301 0.75462 0.90660 1.20875 1.18497 0.74657 0.83796 0.80074 0.88325 0.87825 0.85862 0.89175 0.74879 0.72610 0.89782 0.87306 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.73 12.86 -148.98 -1.92 -4.65 16 2 C -0.08 -0.03 2.45 71.23 0.17 0.14 16 3 Si 0.78 -5.54 30.02 68.60 2.06 -3.48 16 4 C -0.30 -0.59 5.35 -19.78 -0.11 -0.69 16 5 C 0.17 -0.87 9.99 66.97 0.67 -0.20 16 6 O -0.20 0.89 9.21 -2.69 -0.02 0.86 16 7 C 0.16 -0.21 6.74 22.98 0.15 -0.05 16 8 C -0.23 -0.88 5.89 -20.00 -0.12 -1.00 16 9 C -0.01 -0.03 9.40 22.46 0.21 0.18 16 10 C -0.12 0.08 6.22 22.32 0.14 0.22 16 11 Br -0.02 0.02 33.69 -20.37 -0.69 -0.67 16 12 C 0.00 0.02 9.10 22.31 0.20 0.22 16 13 C -0.10 0.43 5.89 -19.79 -0.12 0.31 16 14 C 0.12 -0.79 5.38 71.24 0.38 -0.41 16 15 O -0.35 2.76 8.68 -51.41 -0.45 2.32 16 16 C 0.48 -3.44 7.48 71.23 0.53 -2.91 16 17 O -0.53 -0.02 15.65 21.94 0.34 0.32 16 18 C -0.10 1.40 4.26 -11.02 -0.05 1.36 16 19 H 0.17 -3.53 8.14 -2.39 -0.02 -3.55 16 20 C -0.12 1.92 7.19 31.12 0.22 2.15 16 21 C 0.11 -1.65 4.66 45.52 0.21 -1.44 16 22 H 0.18 -3.77 8.14 -2.39 -0.02 -3.79 16 23 N -0.46 2.60 2.93 -508.17 -1.49 1.11 16 24 C 0.16 0.06 11.59 180.11 2.09 2.15 16 25 N -0.35 -3.74 12.21 -59.99 -0.73 -4.48 16 26 N -0.36 -3.51 12.21 -59.99 -0.73 -4.24 16 27 C 0.17 -0.31 12.74 180.11 2.30 1.99 16 28 C -0.13 1.63 7.10 31.12 0.22 1.85 16 29 C 0.42 3.56 6.98 25.67 0.18 3.74 16 30 O -0.50 -7.94 16.93 -5.05 -0.09 -8.02 16 31 H 0.39 -1.32 8.74 -74.06 -0.65 -1.97 16 32 H 0.08 0.07 7.96 -2.39 -0.02 0.06 16 33 H -0.28 0.41 7.11 99.48 0.71 1.12 16 34 H -0.26 1.28 6.91 99.48 0.69 1.97 16 35 H 0.24 -3.01 4.64 -2.91 -0.01 -3.02 16 36 H 0.14 0.71 7.81 -2.91 -0.02 0.68 16 37 H 0.18 -1.61 6.96 -2.91 -0.02 -1.63 16 38 H 0.10 -0.67 8.13 -2.39 -0.02 -0.69 16 39 H 0.10 -0.80 8.13 -2.38 -0.02 -0.82 16 40 H 0.12 -2.32 8.14 -2.39 -0.02 -2.34 16 41 H 0.09 -1.15 6.94 -2.39 -0.02 -1.17 16 42 H 0.24 -1.39 7.51 -2.91 -0.02 -1.41 16 43 H 0.26 -3.04 8.06 -2.91 -0.02 -3.07 16 44 H 0.08 -0.54 7.23 -2.39 -0.02 -0.56 16 45 H 0.11 -1.58 8.14 -2.39 -0.02 -1.60 16 Total: 0.00 -39.17 411.51 4.06 -35.10 By element: Atomic # 1 Polarization: -22.26 SS G_CDS: 0.48 Total: -21.78 kcal Atomic # 6 Polarization: 0.31 SS G_CDS: 7.30 Total: 7.60 kcal Atomic # 7 Polarization: -4.65 SS G_CDS: -2.96 Total: -7.61 kcal Atomic # 8 Polarization: -7.04 SS G_CDS: -2.13 Total: -9.17 kcal Atomic # 14 Polarization: -5.54 SS G_CDS: 2.06 Total: -3.48 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.67 kcal Total: -39.17 4.06 -35.10 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_17311050_484008.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.305 kcal (2) G-P(sol) polarization free energy of solvation -39.166 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.861 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.064 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.102 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.203 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds