Wall clock time and date at job start Sat Mar 6 2021 05:23:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42900 * 114.00145 * 2 1 4 4 C 1.53001 * 112.85005 * 65.75462 * 3 2 1 5 5 F 1.39898 * 109.47154 * 283.35180 * 4 3 2 6 6 F 1.39904 * 109.46763 * 43.35181 * 4 3 2 7 7 F 1.39901 * 109.47278 * 163.34660 * 4 3 2 8 8 C 1.53780 * 113.61315 * 294.56079 * 3 2 1 9 9 C 1.53778 * 87.08440 * 270.88071 * 8 3 2 10 10 H 1.08996 * 113.61909 * 219.93274 * 9 8 3 11 11 C 1.50703 * 113.61069 * 89.11484 * 9 8 3 12 12 O 1.20818 * 120.00159 * 1.53129 * 11 9 8 13 13 O 1.34233 * 119.99492 * 181.80693 * 11 9 8 14 14 C 1.45200 * 116.99644 * 179.72742 * 13 11 9 15 15 C 1.50700 * 109.47396 * 180.02562 * 14 13 11 16 16 C 1.38932 * 120.04376 * 179.97438 * 15 14 13 17 17 O 1.34882 * 120.99513 * 0.02562 * 16 15 14 18 18 C 1.33712 * 122.41277 * 179.97438 * 17 16 15 19 19 C 1.34543 * 122.85819 * 0.02562 * 18 17 16 20 20 C 1.50701 * 120.20065 * 179.97438 * 19 18 17 21 21 O 1.42904 * 109.46675 * 249.99745 * 20 19 18 22 22 Si 1.86298 * 109.47238 * 9.99808 * 20 19 18 23 23 C 1.41989 * 119.59411 * 359.97438 * 19 18 17 24 24 O 1.21918 * 121.40753 * 180.02562 * 23 19 18 25 25 C 1.40457 * 119.33480 * 179.97438 * 16 15 14 26 26 C 1.39342 * 120.24252 * 0.02562 * 25 16 15 27 27 C 1.37885 * 119.52641 * 359.97438 * 26 25 16 28 28 Br 1.89096 * 119.86734 * 180.02562 * 27 26 25 29 29 C 1.37872 * 120.03716 * 359.72290 * 15 14 13 30 30 C 1.53783 * 87.17159 * 334.52605 * 9 8 3 31 31 H 1.09003 * 109.46745 * 177.88020 * 1 2 3 32 32 H 1.08999 * 109.47068 * 297.88102 * 1 2 3 33 33 H 1.08998 * 109.47431 * 57.87949 * 1 2 3 34 34 H 1.09002 * 113.61233 * 156.33025 * 8 3 2 35 35 H 1.09001 * 113.61835 * 25.43597 * 8 3 2 36 36 H 1.09007 * 109.47280 * 299.99891 * 14 13 11 37 37 H 1.08997 * 109.47649 * 59.99892 * 14 13 11 38 38 H 1.07995 * 118.57133 * 180.02562 * 18 17 16 39 39 H 1.09001 * 109.47337 * 129.99759 * 20 19 18 40 40 H 0.96702 * 113.99566 * 179.97438 * 21 20 19 41 41 H 1.48502 * 109.99789 * 178.68483 * 22 20 19 42 42 H 1.48499 * 110.00222 * 299.99813 * 22 20 19 43 43 H 1.08003 * 120.23659 * 179.97438 * 26 25 16 44 44 H 1.08004 * 119.64519 * 0.02562 * 29 15 14 45 45 H 1.09004 * 113.61338 * 140.02120 * 30 9 8 46 46 H 1.08997 * 113.61464 * 270.92536 * 30 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7230 2.0837 1.2856 5 9 0.4079 2.5602 1.2583 6 9 1.8904 1.2398 2.3888 7 9 2.6080 3.1626 1.3852 8 6 1.7258 2.1064 -1.2815 9 6 3.0037 1.4794 -1.8633 10 1 3.6018 2.1742 -2.4528 11 6 2.7663 0.1684 -2.5675 12 8 1.6462 -0.2758 -2.6557 13 8 3.8000 -0.5086 -3.0920 14 6 3.4978 -1.7669 -3.7505 15 6 4.7719 -2.3794 -4.2725 16 6 4.7350 -3.5950 -4.9442 17 8 3.5695 -4.2447 -5.1410 18 6 3.5012 -5.4153 -5.7837 19 6 4.5840 -6.0379 -6.2837 20 6 4.4379 -7.3570 -6.9976 21 8 5.0023 -8.3971 -6.1965 22 14 2.6318 -7.7085 -7.2894 23 6 5.8653 -5.4444 -6.1346 24 8 6.8684 -5.9794 -6.5750 25 6 5.9314 -4.1521 -5.4249 26 6 7.1421 -3.4909 -5.2286 27 6 7.1573 -2.2854 -4.5595 28 35 8.7949 -1.3794 -4.2884 29 6 5.9750 -1.7316 -4.0886 30 6 3.4939 1.3204 -0.4143 31 1 -0.3633 -1.0270 -0.0380 32 1 -0.3633 0.4806 0.9084 33 1 -0.3634 0.5464 -0.8703 34 1 1.7919 3.1859 -1.1455 35 1 0.8152 1.7987 -1.7958 36 1 3.0334 -2.4479 -3.0372 37 1 2.8139 -1.5879 -4.5800 38 1 2.5347 -5.8812 -5.9069 39 1 4.9584 -7.3121 -7.9542 40 1 4.9430 -9.2763 -6.5947 41 1 2.4758 -8.9914 -8.0208 42 1 1.9108 -7.7723 -5.9927 43 1 8.0621 -3.9195 -5.5980 44 1 5.9981 -0.7850 -3.5690 45 1 4.0100 0.3783 -0.2289 46 1 4.0426 2.1853 -0.0416 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_17315938_484008.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:23:24 Heat of formation + Delta-G solvation = -269.121125 kcal Electronic energy + Delta-G solvation = -42945.078002 eV Core-core repulsion = 36594.592014 eV Total energy + Delta-G solvation = -6350.485988 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 493.021 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -51.20463 -48.75317 -48.63207 -43.31248 -42.37261 -40.63064 -40.01005 -39.68365 -37.92967 -37.65258 -36.92613 -34.68369 -33.70165 -33.13512 -30.69763 -30.09753 -28.49424 -28.10151 -27.48285 -26.96289 -26.08730 -25.38782 -24.32884 -22.91218 -22.31388 -21.05696 -20.52034 -19.84032 -19.59861 -19.48613 -19.37901 -18.74110 -18.61091 -18.39871 -17.88550 -17.70709 -17.48091 -17.11379 -16.65295 -16.52950 -16.39343 -16.22779 -15.77310 -15.74003 -15.64234 -15.55995 -15.51981 -15.30289 -15.16809 -15.13732 -15.02008 -14.82143 -14.80023 -14.46395 -14.40444 -14.23618 -14.02230 -13.84067 -13.70560 -13.52242 -13.38264 -13.18398 -12.94002 -12.66744 -12.60286 -12.45986 -12.25413 -12.07430 -11.90968 -11.79718 -11.57504 -11.44878 -11.04040 -10.94512 -10.64110 -10.52080 -10.38859 -9.53082 -5.23347 -0.78479 -0.66229 0.05041 0.38566 0.94045 1.01022 1.01576 1.21530 1.32503 1.47954 1.50057 1.71144 1.98778 2.34683 2.49353 2.55216 2.68088 2.73847 2.85936 2.97624 3.04974 3.23283 3.27433 3.38363 3.44926 3.49905 3.69153 3.77504 3.82578 3.92171 3.95767 4.03937 4.08461 4.13277 4.18577 4.21013 4.24119 4.29670 4.31144 4.39973 4.45099 4.53476 4.56532 4.63952 4.69176 4.73565 4.82541 5.04263 5.22646 5.66419 5.76810 6.35462 6.47221 6.57639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.327 6.327 3 C 0.036 3.964 4 C 0.438 3.562 5 F -0.180 7.180 6 F -0.173 7.173 7 F -0.175 7.175 8 C -0.137 4.137 9 C -0.101 4.101 10 H 0.133 0.867 11 C 0.486 3.514 12 O -0.482 6.482 13 O -0.352 6.352 14 C 0.120 3.880 15 C -0.105 4.105 16 C 0.162 3.838 17 O -0.211 6.211 18 C 0.140 3.860 19 C -0.265 4.265 20 C -0.049 4.049 21 O -0.529 6.529 22 Si 0.671 3.329 23 C 0.435 3.565 24 O -0.443 6.443 25 C -0.210 4.210 26 C 0.003 3.997 27 C -0.120 4.120 28 Br -0.024 7.024 29 C -0.012 4.012 30 C -0.100 4.100 31 H 0.099 0.901 32 H 0.048 0.952 33 H 0.058 0.942 34 H 0.119 0.881 35 H 0.108 0.892 36 H 0.096 0.904 37 H 0.096 0.904 38 H 0.203 0.797 39 H 0.084 0.916 40 H 0.383 0.617 41 H -0.249 1.249 42 H -0.246 1.246 43 H 0.156 0.844 44 H 0.162 0.838 45 H 0.104 0.896 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.659 3.214 -3.083 5.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.244 6.244 3 C -0.007 4.007 4 C 0.384 3.616 5 F -0.161 7.161 6 F -0.154 7.154 7 F -0.156 7.156 8 C -0.174 4.174 9 C -0.120 4.120 10 H 0.151 0.849 11 C 0.327 3.673 12 O -0.367 6.367 13 O -0.270 6.270 14 C 0.047 3.953 15 C -0.107 4.107 16 C 0.117 3.883 17 O -0.114 6.114 18 C 0.075 3.925 19 C -0.268 4.268 20 C -0.158 4.158 21 O -0.337 6.337 22 Si 0.571 3.429 23 C 0.317 3.683 24 O -0.322 6.322 25 C -0.213 4.213 26 C -0.017 4.017 27 C -0.200 4.200 28 Br 0.062 6.938 29 C -0.032 4.032 30 C -0.138 4.138 31 H 0.117 0.883 32 H 0.067 0.933 33 H 0.077 0.923 34 H 0.137 0.863 35 H 0.127 0.873 36 H 0.114 0.886 37 H 0.114 0.886 38 H 0.218 0.782 39 H 0.102 0.898 40 H 0.231 0.769 41 H -0.173 1.173 42 H -0.172 1.172 43 H 0.173 0.827 44 H 0.179 0.821 45 H 0.123 0.877 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -3.504 2.992 -2.599 5.290 hybrid contribution 0.051 -1.207 0.335 1.253 sum -3.453 1.785 -2.264 4.498 Atomic orbital electron populations 1.23036 0.79028 1.04309 1.01056 1.88087 1.21589 1.20898 1.93820 1.24039 0.99337 0.87095 0.90193 1.21114 0.74441 0.78665 0.87417 1.93200 1.36960 1.89165 1.96778 1.93228 1.95047 1.70655 1.56502 1.93180 1.68660 1.57224 1.96559 1.23591 0.99299 1.00970 0.93525 1.21825 1.00431 0.93036 0.96743 0.84936 1.22698 0.82773 0.85662 0.76121 1.90687 1.24278 1.67541 1.54192 1.86365 1.38933 1.34441 1.67226 1.21508 0.93356 0.82791 0.97675 1.18783 0.95793 0.93015 1.03105 1.18890 0.82932 0.91107 0.95388 1.83117 1.31641 1.32195 1.64465 1.23859 1.00265 0.81784 0.86596 1.20861 0.94924 1.00390 1.10593 1.24346 1.10182 0.85614 0.95639 1.86603 1.81162 1.18554 1.47382 0.95697 0.75042 0.88936 0.83217 1.18230 0.88846 0.83517 0.77740 1.90759 1.37954 1.62163 1.41330 1.20706 0.93110 1.00019 1.07449 1.21133 0.97966 0.91119 0.91495 1.21834 0.93464 0.98107 1.06598 1.96845 1.24979 1.76026 1.95998 1.21046 0.88574 0.99418 0.94133 1.23203 0.91825 1.06736 0.91987 0.88266 0.93309 0.92323 0.86254 0.87323 0.88639 0.88628 0.78152 0.89787 0.76909 1.17302 1.17161 0.82669 0.82071 0.87735 0.85198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 10.11 101.05 1.02 1.02 16 2 O -0.33 -0.32 8.51 -53.06 -0.45 -0.77 16 3 C 0.04 -0.03 0.85 -89.66 -0.08 -0.11 16 4 C 0.44 0.17 2.51 37.16 0.09 0.27 16 5 F -0.18 -0.17 15.36 2.25 0.03 -0.14 16 6 F -0.17 -0.40 17.09 2.25 0.04 -0.36 16 7 F -0.17 0.02 15.83 2.25 0.04 0.05 16 8 C -0.14 0.38 6.33 -25.92 -0.16 0.22 16 9 C -0.10 0.34 4.45 -90.96 -0.40 -0.07 16 10 H 0.13 -0.78 8.14 -51.93 -0.42 -1.20 16 11 C 0.49 -0.41 6.83 36.01 0.25 -0.17 16 12 O -0.48 -0.69 14.17 -24.90 -0.35 -1.04 16 13 O -0.35 0.48 8.68 -39.27 -0.34 0.14 16 14 C 0.12 -0.18 5.38 36.01 0.19 0.02 16 15 C -0.11 0.09 5.89 -104.50 -0.62 -0.53 16 16 C 0.16 0.02 6.74 -38.49 -0.26 -0.24 16 17 O -0.21 0.23 9.21 5.65 0.05 0.29 16 18 C 0.14 -0.24 9.99 29.43 0.29 0.05 16 19 C -0.27 -0.22 5.35 -104.49 -0.56 -0.78 16 20 C -0.05 0.01 2.45 36.01 0.09 0.09 16 21 O -0.53 -0.94 12.86 -35.23 -0.45 -1.39 16 22 Si 0.67 -1.92 30.01 -169.99 -5.10 -7.02 16 23 C 0.43 1.46 6.98 -34.34 -0.24 1.22 16 24 O -0.44 -2.85 16.93 4.99 0.08 -2.76 16 25 C -0.21 -0.36 5.89 -104.84 -0.62 -0.98 16 26 C 0.00 0.00 9.40 -39.30 -0.37 -0.37 16 27 C -0.12 -0.03 6.22 -39.50 -0.25 -0.28 16 28 Br -0.02 -0.01 33.69 -68.01 -2.29 -2.30 16 29 C -0.01 0.01 9.10 -39.51 -0.36 -0.35 16 30 C -0.10 0.31 6.94 -25.77 -0.18 0.13 16 31 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 32 H 0.05 -0.01 6.54 -51.93 -0.34 -0.35 16 33 H 0.06 -0.04 6.63 -51.93 -0.34 -0.39 16 34 H 0.12 -0.54 8.07 -51.93 -0.42 -0.96 16 35 H 0.11 -0.21 5.98 -51.93 -0.31 -0.52 16 36 H 0.10 -0.13 8.13 -51.93 -0.42 -0.55 16 37 H 0.10 -0.20 8.13 -51.93 -0.42 -0.63 16 38 H 0.20 -0.96 4.64 -52.49 -0.24 -1.21 16 39 H 0.08 -0.04 7.96 -51.93 -0.41 -0.45 16 40 H 0.38 -0.91 8.74 45.56 0.40 -0.52 16 41 H -0.25 0.11 7.11 56.52 0.40 0.51 16 42 H -0.25 0.26 6.91 56.52 0.39 0.65 16 43 H 0.16 0.21 7.81 -52.48 -0.41 -0.20 16 44 H 0.16 -0.36 6.96 -52.48 -0.37 -0.72 16 45 H 0.10 -0.29 8.09 -51.93 -0.42 -0.71 16 46 H 0.13 -0.62 7.02 -51.93 -0.36 -0.99 16 LS Contribution 418.76 15.07 6.31 6.31 Total: 0.00 -9.86 418.76 -8.72 -18.58 By element: Atomic # 1 Polarization: -4.61 SS G_CDS: -4.13 Total: -8.74 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: -2.15 Total: -0.85 kcal Atomic # 8 Polarization: -4.07 SS G_CDS: -1.46 Total: -5.53 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.11 Total: -0.45 kcal Atomic # 14 Polarization: -1.92 SS G_CDS: -5.10 Total: -7.02 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -2.29 Total: -2.30 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -9.86 -8.72 -18.58 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_17315938_484008.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -250.539 kcal (2) G-P(sol) polarization free energy of solvation -9.864 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -260.403 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.718 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.582 kcal (6) G-S(sol) free energy of system = (1) + (5) -269.121 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds