Wall clock time and date at job start Sat Mar 6 2021 05:26:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86307 * 109.47159 * 2 1 4 4 C 1.50695 * 109.47505 * 120.00560 * 2 1 3 5 5 C 1.34543 * 120.20206 * 250.02445 * 4 2 1 6 6 O 1.33718 * 122.85053 * 179.97438 * 5 4 2 7 7 C 1.34886 * 122.40669 * 0.02562 * 6 5 4 8 8 C 1.40415 * 119.68382 * 359.97438 * 7 6 5 9 9 C 1.39390 * 120.23197 * 179.97438 * 8 7 6 10 10 C 1.37837 * 119.52998 * 0.02562 * 9 8 7 11 11 Br 1.89103 * 119.86341 * 179.97438 * 10 9 8 12 12 C 1.38847 * 120.27597 * 359.96658 * 10 9 8 13 13 C 1.37823 * 120.69985 * 359.79741 * 12 10 9 14 14 C 1.50703 * 120.03791 * 179.97438 * 13 12 10 15 15 O 1.45205 * 109.47116 * 0.48104 * 14 13 12 16 16 C 1.34228 * 116.99806 * 179.97438 * 15 14 13 17 17 O 1.20814 * 120.00183 * 0.02562 * 16 15 14 18 18 C 1.50704 * 119.99556 * 179.97438 * 16 15 14 19 19 H 1.08992 * 112.85324 * 309.67161 * 18 16 15 20 20 C 1.53786 * 113.61058 * 80.87190 * 18 16 15 21 21 C 1.54048 * 86.98876 * 89.15745 * 20 18 16 22 22 O 1.42902 * 113.69001 * 270.87704 * 21 20 18 23 23 C 1.52999 * 113.62007 * 139.97724 * 21 20 18 24 24 F 1.39895 * 109.47080 * 322.50558 * 23 21 20 25 25 F 1.39894 * 109.46813 * 82.50560 * 23 21 20 26 26 F 1.39900 * 109.47017 * 202.50631 * 23 21 20 27 27 C 1.53781 * 113.61189 * 178.47245 * 18 16 15 28 28 C 1.41998 * 120.20813 * 69.99374 * 4 2 1 29 29 O 1.21926 * 121.40183 * 0.02562 * 28 4 2 30 30 H 0.96696 * 114.00006 * 59.99851 * 1 2 3 31 31 H 1.09003 * 109.47013 * 240.00735 * 2 1 3 32 32 H 1.48507 * 109.99375 * 60.00414 * 3 2 1 33 33 H 1.48492 * 109.99865 * 181.31967 * 3 2 1 34 34 H 1.08002 * 118.57596 * 359.97371 * 5 4 2 35 35 H 1.08001 * 120.23166 * 180.02562 * 9 8 7 36 36 H 1.08000 * 119.64568 * 180.02562 * 12 10 9 37 37 H 1.08993 * 109.47496 * 120.48245 * 14 13 12 38 38 H 1.09000 * 109.46789 * 240.48360 * 14 13 12 39 39 H 1.08996 * 113.61343 * 203.66603 * 20 18 16 40 40 H 1.09001 * 113.61513 * 334.56306 * 20 18 16 41 41 H 0.96702 * 113.99632 * 277.52987 * 22 21 20 42 42 H 1.08999 * 113.61377 * 25.43455 * 27 18 16 43 43 H 1.08996 * 113.61806 * 156.33953 * 27 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 2.5316 -0.0170 2.2147 6 8 2.9964 -0.5929 3.3284 7 6 2.8990 -1.9197 3.5509 8 6 2.2902 -2.7430 2.5901 9 6 2.1840 -4.1157 2.8080 10 6 2.6803 -4.6590 3.9735 11 35 2.5405 -6.5199 4.2792 12 6 3.2826 -3.8456 4.9241 13 6 3.3975 -2.4878 4.7172 14 6 4.0535 -1.6188 5.7592 15 8 4.4870 -2.4428 6.8734 16 6 5.0954 -1.8172 7.8934 17 8 5.2597 -0.6209 7.8566 18 6 5.5723 -2.6072 9.0849 19 1 4.8034 -3.2629 9.4934 20 6 6.9228 -3.3073 8.8593 21 6 7.5860 -2.0184 9.3811 22 8 7.8562 -1.0573 8.3587 23 6 8.7898 -2.2732 10.2903 24 9 8.5401 -3.3920 11.0921 25 9 9.9252 -2.5052 9.5066 26 9 9.0049 -1.1553 11.1035 27 6 6.2802 -1.7510 10.1482 28 6 1.7738 -2.1159 1.3582 29 8 1.2350 -2.7766 0.4866 30 1 -0.3933 0.4417 -0.7650 31 1 1.7924 -0.5137 -0.8901 32 1 1.5615 2.4678 1.2086 33 1 3.5346 1.7703 -0.0321 34 1 2.6428 1.0512 2.1005 35 1 1.7161 -4.7490 2.0688 36 1 3.6684 -4.2821 5.8335 37 1 4.9160 -1.1157 5.3222 38 1 3.3399 -0.8750 6.1134 39 1 7.0799 -4.1713 9.5048 40 1 7.1365 -3.5164 7.8111 41 1 8.6762 -1.2202 7.8726 42 1 5.9755 -0.7045 10.1399 43 1 6.2621 -2.1902 11.1456 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_17316914_484008.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:26:01 Heat of formation + Delta-G solvation = -276.822156 kcal Electronic energy + Delta-G solvation = -40232.392462 eV Core-core repulsion = 34037.110151 eV Total energy + Delta-G solvation = -6195.282310 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 479.005 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -51.28793 -48.84155 -48.73145 -43.37054 -42.29605 -40.49990 -40.05298 -39.66413 -37.81071 -37.55155 -36.23244 -34.71831 -33.73818 -33.17824 -30.73928 -29.95419 -28.36185 -27.49229 -27.43929 -26.15037 -25.45215 -24.35149 -23.04258 -22.36471 -21.13372 -20.58796 -20.18888 -19.65133 -19.56946 -19.49044 -18.73681 -18.58250 -18.50293 -17.92798 -17.67247 -17.50503 -17.23497 -16.70694 -16.49840 -16.33831 -16.15471 -15.69463 -15.65772 -15.54253 -15.42673 -15.39562 -15.19790 -15.17996 -14.97863 -14.90680 -14.87767 -14.76240 -14.70873 -14.29604 -14.05289 -13.97787 -13.79960 -13.71533 -13.34564 -13.00650 -12.90429 -12.83973 -12.65478 -12.28178 -12.15004 -12.00296 -11.84047 -11.57386 -11.48620 -11.45440 -11.05526 -10.70593 -10.43851 -10.36932 -9.57838 -5.25302 -0.84269 -0.71395 -0.01379 0.34221 0.89597 1.00211 1.02644 1.19259 1.35881 1.39571 1.45332 1.60613 2.21775 2.30416 2.43188 2.47341 2.65029 2.68759 2.82183 2.97500 2.99316 3.14789 3.24586 3.34299 3.43257 3.50141 3.67000 3.73691 3.80611 3.90668 3.94440 3.99858 4.02400 4.11775 4.20125 4.23374 4.24850 4.32615 4.45925 4.51902 4.58886 4.62647 4.64679 4.77275 4.99565 5.21584 5.70026 6.00191 6.40459 6.56038 6.59079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.047 4.047 3 Si 0.680 3.320 4 C -0.262 4.262 5 C 0.132 3.868 6 O -0.212 6.212 7 C 0.162 3.838 8 C -0.210 4.210 9 C 0.004 3.996 10 C -0.120 4.120 11 Br -0.023 7.023 12 C -0.012 4.012 13 C -0.105 4.105 14 C 0.120 3.880 15 O -0.355 6.355 16 C 0.481 3.519 17 O -0.473 6.473 18 C -0.100 4.100 19 H 0.131 0.869 20 C -0.140 4.140 21 C 0.058 3.942 22 O -0.497 6.497 23 C 0.435 3.565 24 F -0.174 7.174 25 F -0.182 7.182 26 F -0.172 7.172 27 C -0.101 4.101 28 C 0.435 3.565 29 O -0.439 6.439 30 H 0.385 0.615 31 H 0.082 0.918 32 H -0.243 1.243 33 H -0.246 1.246 34 H 0.194 0.806 35 H 0.157 0.843 36 H 0.162 0.838 37 H 0.095 0.905 38 H 0.095 0.905 39 H 0.124 0.876 40 H 0.099 0.901 41 H 0.388 0.612 42 H 0.112 0.888 43 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.547 1.335 -0.598 1.562 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.157 4.157 3 Si 0.580 3.420 4 C -0.264 4.264 5 C 0.067 3.933 6 O -0.115 6.115 7 C 0.116 3.884 8 C -0.213 4.213 9 C -0.016 4.016 10 C -0.200 4.200 11 Br 0.063 6.937 12 C -0.031 4.031 13 C -0.107 4.107 14 C 0.046 3.954 15 O -0.272 6.272 16 C 0.321 3.679 17 O -0.357 6.357 18 C -0.119 4.119 19 H 0.149 0.851 20 C -0.177 4.177 21 C 0.014 3.986 22 O -0.303 6.303 23 C 0.380 3.620 24 F -0.155 7.155 25 F -0.163 7.163 26 F -0.154 7.154 27 C -0.138 4.138 28 C 0.317 3.683 29 O -0.317 6.317 30 H 0.233 0.767 31 H 0.100 0.900 32 H -0.168 1.168 33 H -0.170 1.170 34 H 0.210 0.790 35 H 0.174 0.826 36 H 0.180 0.820 37 H 0.113 0.887 38 H 0.113 0.887 39 H 0.142 0.858 40 H 0.118 0.882 41 H 0.238 0.762 42 H 0.130 0.870 43 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 0.416 1.334 0.393 1.451 hybrid contribution 0.785 -0.283 -0.250 0.871 sum 1.200 1.051 0.144 1.602 Atomic orbital electron populations 1.86505 1.16692 1.82026 1.49514 1.24237 0.86316 1.09252 0.95923 0.94372 0.81237 0.78132 0.88272 1.21020 1.09428 0.96623 0.99357 1.23703 0.90101 0.97318 0.82187 1.83105 1.69079 1.21440 1.37917 1.18921 0.95633 0.80135 0.93710 1.20703 1.07229 0.95054 0.98318 1.21136 0.92378 0.93033 0.95082 1.21843 1.07121 0.92854 0.98169 1.96848 1.97455 1.03086 1.96315 1.21047 0.92864 0.90830 0.98386 1.18790 1.04269 0.94089 0.93544 1.21490 0.99821 0.90816 0.83236 1.86367 1.69996 1.42321 1.28528 1.22748 0.74972 0.87175 0.82985 1.90743 1.50846 1.15530 1.78571 1.21806 0.99049 0.98606 0.92472 0.85073 1.23771 0.92414 0.96524 1.05037 1.23731 0.91226 0.93466 0.90217 1.86815 1.46693 1.49058 1.47774 1.21176 0.85272 0.74549 0.80960 1.93191 1.94038 1.53127 1.75167 1.93193 1.54502 1.94427 1.74171 1.93240 1.95425 1.52253 1.74450 1.23134 0.89219 1.04192 0.97299 1.18197 0.77485 0.87732 0.84898 1.90761 1.34130 1.66364 1.40468 0.76745 0.90028 1.16754 1.16981 0.78981 0.82551 0.82028 0.88713 0.88736 0.85814 0.88199 0.76163 0.86958 0.85847 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.45 12.86 -35.23 -0.45 -0.90 16 2 C -0.05 0.00 2.45 36.00 0.09 0.09 16 3 Si 0.68 -1.99 30.02 -169.99 -5.10 -7.09 16 4 C -0.26 -0.50 5.35 -104.49 -0.56 -1.06 16 5 C 0.13 0.01 9.99 29.43 0.29 0.30 16 6 O -0.21 -0.08 9.21 5.63 0.05 -0.03 16 7 C 0.16 0.16 6.74 -38.49 -0.26 -0.09 16 8 C -0.21 -0.50 5.89 -104.84 -0.62 -1.11 16 9 C 0.00 0.01 9.40 -39.30 -0.37 -0.36 16 10 C -0.12 -0.06 6.22 -39.50 -0.25 -0.31 16 11 Br -0.02 -0.01 33.69 -68.01 -2.29 -2.30 16 12 C -0.01 0.01 9.10 -39.51 -0.36 -0.35 16 13 C -0.11 0.02 5.89 -104.50 -0.62 -0.60 16 14 C 0.12 -0.08 5.38 36.01 0.19 0.11 16 15 O -0.35 0.31 8.68 -39.25 -0.34 -0.03 16 16 C 0.48 -0.10 6.83 36.01 0.25 0.14 16 17 O -0.47 -1.36 14.38 -24.88 -0.36 -1.71 16 18 C -0.10 0.30 4.45 -90.95 -0.40 -0.10 16 19 H 0.13 -0.71 8.14 -51.93 -0.42 -1.13 16 20 C -0.14 0.52 6.96 -25.78 -0.18 0.34 16 21 C 0.06 -0.10 1.36 -89.66 -0.12 -0.22 16 22 O -0.50 0.22 11.56 -53.00 -0.61 -0.39 16 23 C 0.44 -0.24 2.85 37.16 0.11 -0.13 16 24 F -0.17 0.12 15.76 2.25 0.04 0.15 16 25 F -0.18 0.00 16.65 2.25 0.04 0.04 16 26 F -0.17 -0.24 17.18 2.25 0.04 -0.20 16 27 C -0.10 0.24 6.68 -25.92 -0.17 0.07 16 28 C 0.44 1.73 6.98 -34.34 -0.24 1.50 16 29 O -0.44 -2.92 16.93 4.99 0.08 -2.83 16 30 H 0.38 -1.67 8.74 45.56 0.40 -1.28 16 31 H 0.08 -0.03 7.96 -51.93 -0.41 -0.45 16 32 H -0.24 0.26 6.91 56.52 0.39 0.65 16 33 H -0.25 0.28 7.11 56.52 0.40 0.68 16 34 H 0.19 -0.42 4.64 -52.49 -0.24 -0.67 16 35 H 0.16 0.23 7.81 -52.49 -0.41 -0.18 16 36 H 0.16 -0.31 6.96 -52.49 -0.37 -0.68 16 37 H 0.09 -0.08 8.13 -51.93 -0.42 -0.50 16 38 H 0.09 -0.07 8.13 -51.93 -0.42 -0.50 16 39 H 0.12 -0.63 7.14 -51.93 -0.37 -1.00 16 40 H 0.10 -0.40 8.09 -51.93 -0.42 -0.82 16 41 H 0.39 -1.38 8.42 45.56 0.38 -1.00 16 42 H 0.11 -0.06 7.42 -51.93 -0.39 -0.45 16 43 H 0.12 -0.54 7.88 -51.93 -0.41 -0.95 16 LS Contribution 402.92 15.07 6.07 6.07 Total: 0.00 -10.51 402.92 -8.77 -19.28 By element: Atomic # 1 Polarization: -5.55 SS G_CDS: -2.71 Total: -8.26 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -3.22 Total: -1.79 kcal Atomic # 8 Polarization: -4.27 SS G_CDS: -1.63 Total: -5.90 kcal Atomic # 9 Polarization: -0.12 SS G_CDS: 0.11 Total: -0.01 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: -5.10 Total: -7.09 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -2.29 Total: -2.30 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -10.51 -8.77 -19.28 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_17316914_484008.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -257.544 kcal (2) G-P(sol) polarization free energy of solvation -10.513 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -268.056 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.766 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.279 kcal (6) G-S(sol) free energy of system = (1) + (5) -276.822 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds