Wall clock time and date at job start Sat Mar 6 2021 06:33:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42898 * 112.91195 * 2 1 4 4 C 1.53775 * 113.61592 * 131.25701 * 2 1 3 5 5 C 1.53779 * 87.08247 * 89.11350 * 4 2 1 6 6 H 1.09004 * 113.61525 * 270.79692 * 5 4 2 7 7 C 1.50700 * 113.61522 * 139.98278 * 5 4 2 8 8 O 1.20830 * 120.00209 * 0.02562 * 7 5 4 9 9 O 1.34233 * 120.00349 * 179.97438 * 7 5 4 10 10 C 1.45192 * 117.00580 * 180.02562 * 9 7 5 11 11 C 1.50700 * 109.47400 * 180.02562 * 10 9 7 12 12 C 1.38941 * 120.03687 * 179.97438 * 11 10 9 13 13 O 1.34873 * 120.98482 * 0.02898 * 12 11 10 14 14 C 1.33724 * 122.41237 * 179.97438 * 13 12 11 15 15 C 1.34539 * 122.84709 * 0.02562 * 14 13 12 16 16 C 1.50703 * 120.19563 * 179.97438 * 15 14 13 17 17 O 1.42906 * 109.47319 * 250.00203 * 16 15 14 18 18 Si 1.86309 * 109.47269 * 9.99868 * 16 15 14 19 19 C 1.41996 * 119.60242 * 0.02562 * 15 14 13 20 20 O 1.21920 * 121.40792 * 179.97438 * 19 15 14 21 21 C 1.40457 * 119.33555 * 180.02562 * 12 11 10 22 22 C 1.39351 * 120.23766 * 359.95680 * 21 12 11 23 23 C 1.37882 * 119.52367 * 359.97438 * 22 21 12 24 24 Br 1.89096 * 119.85919 * 180.02562 * 23 22 21 25 25 C 1.37865 * 120.04120 * 359.93845 * 11 10 9 26 26 C 1.53775 * 87.08155 * 25.43465 * 5 4 2 27 27 H 1.09005 * 109.46966 * 288.74775 * 1 2 3 28 28 H 1.08999 * 109.47156 * 48.74183 * 1 2 3 29 29 H 1.09000 * 109.47315 * 168.74248 * 1 2 3 30 30 H 0.96703 * 114.00000 * 311.26011 * 3 2 1 31 31 H 1.09003 * 113.61365 * 334.56878 * 4 2 1 32 32 H 1.08995 * 113.69396 * 203.67343 * 4 2 1 33 33 H 1.08997 * 109.47062 * 60.00029 * 10 9 7 34 34 H 1.09011 * 109.47142 * 300.00440 * 10 9 7 35 35 H 1.07989 * 118.57297 * 179.72390 * 14 13 12 36 36 H 1.09000 * 109.47198 * 129.99680 * 16 15 14 37 37 H 0.96695 * 114.00026 * 59.99765 * 17 16 15 38 38 H 1.48497 * 110.00067 * 179.97438 * 18 16 15 39 39 H 1.48494 * 109.99741 * 301.32054 * 18 16 15 40 40 H 1.07993 * 120.23452 * 180.02562 * 22 21 12 41 41 H 1.08005 * 119.64605 * 0.03244 * 25 11 10 42 42 H 1.08999 * 113.61433 * 89.12034 * 26 5 4 43 43 H 1.09004 * 113.61393 * 220.01889 * 26 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0863 1.3162 0.0000 4 6 2.1460 -0.9291 1.0592 5 6 2.0929 -2.0425 -0.0002 6 1 1.1573 -2.6019 0.0008 7 6 3.3078 -2.9342 -0.0003 8 8 4.2029 -2.7358 0.7867 9 8 3.3951 -3.9495 -0.8740 10 6 4.5934 -4.7674 -0.8166 11 6 4.5144 -5.8483 -1.8637 12 6 5.5534 -6.7605 -2.0014 13 8 6.6423 -6.6975 -1.2080 14 6 7.6582 -7.5605 -1.3153 15 6 7.6770 -8.5567 -2.2193 16 6 8.8540 -9.4955 -2.2883 17 8 9.5875 -9.2522 -3.4904 18 14 9.9613 -9.2123 -0.8170 19 6 6.5819 -8.7176 -3.1087 20 8 6.5648 -9.6085 -3.9409 21 6 5.4648 -7.7616 -2.9825 22 6 4.3446 -7.8380 -3.8080 23 6 3.3237 -6.9241 -3.6542 24 35 1.7990 -7.0194 -4.7686 25 6 3.4109 -5.9338 -2.6857 26 6 2.1460 -0.9290 -1.0594 27 1 -0.3633 0.3303 0.9732 28 1 -0.3633 0.6777 -0.7725 29 1 -0.3634 -1.0079 -0.2006 30 1 1.7028 1.9053 -0.6641 31 1 1.4945 -1.1088 1.9144 32 1 3.1590 -0.6510 1.3499 33 1 4.6757 -5.2225 0.1704 34 1 5.4680 -4.1442 -1.0034 35 1 8.5021 -7.4501 -0.6506 36 1 8.4979 -10.5256 -2.2821 37 1 9.9352 -8.3529 -3.5638 38 1 11.1255 -10.1325 -0.8730 39 1 10.4279 -7.8028 -0.7964 40 1 4.2763 -8.6080 -4.5620 41 1 2.6058 -5.2225 -2.5747 42 1 3.1590 -0.6499 -1.3491 43 1 1.4944 -1.1085 -1.9147 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_17637880_484008.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:33:17 Heat of formation + Delta-G solvation = -142.056520 kcal Electronic energy + Delta-G solvation = -32047.602219 eV Core-core repulsion = 27266.525712 eV Total energy + Delta-G solvation = -4781.076507 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.033 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -43.35603 -42.06530 -40.41944 -40.17789 -39.73073 -38.04913 -37.65428 -35.90414 -34.65706 -33.69713 -33.15803 -30.75185 -30.32638 -28.47848 -27.49469 -26.89224 -26.32145 -25.59618 -24.45062 -22.62033 -22.13478 -20.75743 -20.01553 -19.61037 -19.16628 -18.84913 -18.13217 -17.97426 -17.65484 -17.48726 -17.14345 -16.73575 -16.45322 -16.26361 -16.23422 -16.01715 -15.69427 -15.58351 -15.31245 -15.20342 -14.72938 -14.56276 -14.39724 -14.04301 -14.02905 -13.88085 -13.71056 -13.29794 -13.08217 -12.83586 -12.67056 -12.55802 -12.36111 -12.29260 -12.10164 -11.86241 -11.83180 -11.79299 -11.52857 -11.36023 -11.31592 -10.74509 -10.71797 -10.57228 -10.43411 -9.59606 -4.99853 -0.85913 -0.71176 0.02687 0.33410 0.96387 1.04320 1.15762 1.34817 1.39621 1.46655 1.95260 2.26719 2.67123 2.84374 3.16320 3.20505 3.27754 3.29406 3.37942 3.41553 3.60294 3.64799 3.69406 3.79014 3.81935 3.93241 3.95774 4.10179 4.11262 4.28072 4.30993 4.32560 4.52134 4.59587 4.61072 4.64254 4.67566 4.77964 4.81024 4.83437 5.00342 5.01912 5.10245 5.15166 5.26454 5.36300 5.74090 6.31314 6.47106 6.59451 6.88836 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C 0.103 3.897 3 O -0.574 6.574 4 C -0.116 4.116 5 C -0.101 4.101 6 H 0.161 0.839 7 C 0.479 3.521 8 O -0.531 6.531 9 O -0.348 6.348 10 C 0.116 3.884 11 C -0.098 4.098 12 C 0.166 3.834 13 O -0.202 6.202 14 C 0.170 3.830 15 C -0.333 4.333 16 C -0.072 4.072 17 O -0.550 6.550 18 Si 0.784 3.216 19 C 0.425 3.575 20 O -0.495 6.495 21 C -0.226 4.226 22 C -0.009 4.009 23 C -0.120 4.120 24 Br -0.024 7.024 25 C -0.007 4.007 26 C -0.141 4.141 27 H 0.066 0.934 28 H 0.077 0.923 29 H 0.089 0.911 30 H 0.394 0.606 31 H 0.095 0.905 32 H 0.077 0.923 33 H 0.104 0.896 34 H 0.098 0.902 35 H 0.241 0.759 36 H 0.105 0.895 37 H 0.386 0.614 38 H -0.300 1.300 39 H -0.240 1.240 40 H 0.145 0.855 41 H 0.177 0.823 42 H 0.080 0.920 43 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.255 4.969 4.605 8.000 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.218 4.218 2 C 0.062 3.938 3 O -0.383 6.383 4 C -0.153 4.153 5 C -0.120 4.120 6 H 0.179 0.821 7 C 0.323 3.677 8 O -0.419 6.419 9 O -0.265 6.265 10 C 0.042 3.958 11 C -0.099 4.099 12 C 0.120 3.880 13 O -0.105 6.105 14 C 0.105 3.895 15 C -0.336 4.336 16 C -0.178 4.178 17 O -0.358 6.358 18 Si 0.685 3.315 19 C 0.311 3.689 20 O -0.378 6.378 21 C -0.228 4.228 22 C -0.029 4.029 23 C -0.200 4.200 24 Br 0.062 6.938 25 C -0.026 4.026 26 C -0.178 4.178 27 H 0.085 0.915 28 H 0.096 0.904 29 H 0.108 0.892 30 H 0.244 0.756 31 H 0.114 0.886 32 H 0.096 0.904 33 H 0.122 0.878 34 H 0.116 0.884 35 H 0.257 0.743 36 H 0.123 0.877 37 H 0.235 0.765 38 H -0.227 1.227 39 H -0.165 1.165 40 H 0.163 0.837 41 H 0.195 0.805 42 H 0.098 0.902 43 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -3.592 4.055 4.761 7.212 hybrid contribution 0.675 0.128 -1.706 1.839 sum -2.917 4.183 3.055 5.945 Atomic orbital electron populations 1.22199 0.91380 1.04670 1.03573 1.22615 0.93811 0.81757 0.95578 1.86552 1.66141 1.23366 1.62224 1.23144 1.02722 0.92292 0.97144 1.22467 0.95680 0.93102 1.00741 0.82139 1.23904 0.88598 0.78605 0.76551 1.90708 1.41315 1.70503 1.39401 1.86405 1.42939 1.40816 1.56344 1.21579 0.86433 0.89702 0.98063 1.18831 0.93074 0.97284 1.00717 1.18873 0.85961 0.93849 0.89356 1.83172 1.24404 1.50311 1.52595 1.24511 0.87537 0.83781 0.93659 1.21878 1.02355 1.05015 1.04322 1.25230 0.93970 1.00629 0.97977 1.86659 1.71946 1.36690 1.40510 0.94436 0.78566 0.78940 0.79603 1.18758 0.85191 0.82430 0.82538 1.90752 1.79987 1.32427 1.34610 1.20730 0.99808 1.00841 1.01452 1.21124 0.89735 0.96168 0.95850 1.21854 0.96000 1.00941 1.01200 1.96843 1.34196 1.98436 1.64338 1.21237 0.97007 0.94988 0.89371 1.23666 1.03028 0.93341 0.97799 0.91540 0.90435 0.89229 0.75565 0.88624 0.90386 0.87833 0.88408 0.74323 0.87702 0.76510 1.22731 1.16542 0.83717 0.80530 0.90186 0.87288 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 1.44 9.32 71.98 0.67 2.11 16 2 C 0.10 -0.45 1.94 -10.27 -0.02 -0.47 16 3 O -0.57 0.24 13.50 -148.98 -2.01 -1.77 16 4 C -0.12 0.21 6.83 31.12 0.21 0.42 16 5 C -0.10 0.56 3.91 -11.02 -0.04 0.51 16 6 H 0.16 -1.85 7.66 -2.39 -0.02 -1.87 16 7 C 0.48 -0.16 7.48 71.24 0.53 0.37 16 8 O -0.53 -3.47 15.65 21.95 0.34 -3.12 16 9 O -0.35 1.02 8.68 -51.45 -0.45 0.58 16 10 C 0.12 -0.42 5.38 71.24 0.38 -0.04 16 11 C -0.10 0.25 5.89 -19.78 -0.12 0.14 16 12 C 0.17 -0.14 6.74 22.98 0.15 0.01 16 13 O -0.20 0.97 9.21 -2.72 -0.03 0.95 16 14 C 0.17 -1.18 9.99 66.97 0.67 -0.51 16 15 C -0.33 -0.06 5.32 -19.78 -0.11 -0.17 16 16 C -0.07 -0.05 2.46 71.24 0.17 0.12 16 17 O -0.55 -3.04 12.88 -148.98 -1.92 -4.96 16 18 Si 0.78 -5.37 30.06 68.60 2.06 -3.31 16 19 C 0.42 3.23 6.98 25.67 0.18 3.41 16 20 O -0.49 -7.95 16.93 -5.06 -0.09 -8.03 16 21 C -0.23 -0.87 5.89 -20.00 -0.12 -0.98 16 22 C -0.01 -0.03 9.40 22.45 0.21 0.18 16 23 C -0.12 -0.08 6.22 22.32 0.14 0.06 16 24 Br -0.02 -0.01 33.69 -20.37 -0.69 -0.70 16 25 C -0.01 0.02 9.10 22.31 0.20 0.22 16 26 C -0.14 0.84 7.02 31.12 0.22 1.06 16 27 H 0.07 -0.48 8.14 -2.38 -0.02 -0.50 16 28 H 0.08 -0.82 8.14 -2.39 -0.02 -0.84 16 29 H 0.09 -1.07 7.34 -2.39 -0.02 -1.09 16 30 H 0.39 -3.31 9.04 -74.06 -0.67 -3.98 16 31 H 0.10 -0.39 8.10 -2.39 -0.02 -0.41 16 32 H 0.08 0.34 7.43 -2.39 -0.02 0.32 16 33 H 0.10 -0.49 8.13 -2.39 -0.02 -0.51 16 34 H 0.10 -0.38 8.14 -2.38 -0.02 -0.40 16 35 H 0.24 -3.60 4.61 -2.92 -0.01 -3.61 16 36 H 0.10 0.38 7.96 -2.39 -0.02 0.36 16 37 H 0.39 -1.06 8.70 -74.06 -0.64 -1.70 16 38 H -0.30 -0.76 7.11 99.48 0.71 -0.05 16 39 H -0.24 2.02 6.85 99.48 0.68 2.70 16 40 H 0.15 0.78 7.81 -2.91 -0.02 0.76 16 41 H 0.18 -1.01 6.96 -2.91 -0.02 -1.03 16 42 H 0.08 -0.19 8.09 -2.39 -0.02 -0.21 16 43 H 0.11 -1.11 8.10 -2.39 -0.02 -1.13 16 Total: 0.00 -27.53 388.77 0.39 -27.14 By element: Atomic # 1 Polarization: -13.01 SS G_CDS: -0.19 Total: -13.20 kcal Atomic # 6 Polarization: 3.09 SS G_CDS: 3.35 Total: 6.44 kcal Atomic # 8 Polarization: -12.22 SS G_CDS: -4.14 Total: -16.36 kcal Atomic # 14 Polarization: -5.37 SS G_CDS: 2.06 Total: -3.31 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -0.69 Total: -0.70 kcal Total: -27.53 0.39 -27.14 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_17637880_484008.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.921 kcal (2) G-P(sol) polarization free energy of solvation -27.525 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.446 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.390 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.135 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.057 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds