Wall clock time and date at job start Sat Mar 6 2021 07:15:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86308 * 109.46785 * 2 1 4 4 C 1.50696 * 109.47450 * 120.00024 * 2 1 3 5 5 C 1.34539 * 120.20338 * 249.98284 * 4 2 1 6 6 O 1.33712 * 122.85060 * 180.02562 * 5 4 2 7 7 C 1.34882 * 122.41212 * 359.95144 * 6 5 4 8 8 C 1.40421 * 119.67820 * 0.04414 * 7 6 5 9 9 C 1.39386 * 120.23788 * 179.97438 * 8 7 6 10 10 C 1.37849 * 119.52559 * 359.97438 * 9 8 7 11 11 Br 1.89103 * 119.85989 * 180.02562 * 10 9 8 12 12 C 1.38834 * 120.27629 * 359.79384 * 10 9 8 13 13 C 1.37830 * 120.70219 * 0.44755 * 12 10 9 14 14 C 1.50706 * 120.04005 * 179.80958 * 13 12 10 15 15 O 1.45201 * 109.47064 * 359.72085 * 14 13 12 16 16 C 1.34222 * 117.00137 * 180.02562 * 15 14 13 17 17 O 1.20833 * 119.99852 * 0.02562 * 16 15 14 18 18 C 1.50696 * 120.00432 * 179.71953 * 16 15 14 19 19 C 1.53965 * 113.58671 * 279.51130 * 18 16 15 20 20 C 1.52938 * 86.71642 * 220.74211 * 19 18 16 21 21 C 1.52777 * 88.14993 * 24.80489 * 20 19 18 22 22 C 1.53183 * 115.80725 * 142.65724 * 20 19 18 23 23 O 1.45993 * 103.54785 * 129.42068 * 22 20 19 24 24 C 1.33931 * 109.43256 * 359.97438 * 23 22 20 25 25 O 1.21509 * 123.09864 * 180.02562 * 24 23 22 26 26 N 1.34361 * 113.80529 * 359.97438 * 24 23 22 27 27 C 1.41997 * 120.20564 * 70.00133 * 4 2 1 28 28 O 1.21925 * 121.40336 * 359.95625 * 27 4 2 29 29 H 0.96695 * 114.00068 * 299.99776 * 1 2 3 30 30 H 1.09005 * 109.47121 * 240.00716 * 2 1 3 31 31 H 1.48495 * 109.99732 * 178.68296 * 3 2 1 32 32 H 1.48497 * 110.00010 * 300.00342 * 3 2 1 33 33 H 1.07997 * 118.57391 * 0.02562 * 5 4 2 34 34 H 1.07995 * 120.23697 * 180.02562 * 9 8 7 35 35 H 1.08000 * 119.64793 * 180.24848 * 12 10 9 36 36 H 1.08997 * 109.46698 * 239.72065 * 14 13 12 37 37 H 1.08997 * 109.46779 * 119.72184 * 14 13 12 38 38 H 1.09003 * 112.82026 * 50.61011 * 18 16 15 39 39 H 1.08995 * 113.66059 * 335.18047 * 19 18 16 40 40 H 1.08997 * 113.66536 * 106.24690 * 19 18 16 41 41 H 1.08995 * 113.66723 * 220.72554 * 21 20 19 42 42 H 1.09000 * 113.74743 * 89.67433 * 21 20 19 43 43 H 1.09000 * 110.60835 * 247.93101 * 22 20 19 44 44 H 1.09003 * 110.60498 * 10.90484 * 22 20 19 45 45 H 0.96997 * 125.80841 * 180.02562 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.5323 -0.0170 2.2144 6 8 2.9980 -0.5929 3.3276 7 6 2.8996 -1.9195 3.5508 8 6 2.2899 -2.7428 2.5905 9 6 2.1825 -4.1152 2.8089 10 6 2.6795 -4.6586 3.9742 11 35 2.5395 -6.5195 4.2799 12 6 3.2868 -3.8461 4.9221 13 6 3.3942 -2.4871 4.7190 14 6 4.0524 -1.6184 5.7599 15 8 4.4804 -2.4415 6.8769 16 6 5.0889 -1.8161 7.8968 17 8 5.2580 -0.6203 7.8577 18 6 5.5552 -2.6042 9.0936 19 6 4.4321 -2.9214 10.0979 20 6 5.4480 -2.6100 11.1980 21 6 6.1948 -1.7356 10.1922 22 6 4.8963 -1.8850 12.4294 23 8 5.3798 -2.6915 13.5462 24 6 6.0956 -3.7209 13.0755 25 8 6.6155 -4.5514 13.7941 26 7 6.1851 -3.7513 11.7352 27 6 1.7739 -2.1158 1.3583 28 8 1.2341 -2.7764 0.4872 29 1 -0.3933 0.4416 0.7650 30 1 1.7923 -0.5137 -0.8901 31 1 3.5345 1.7704 0.0321 32 1 1.5613 2.4680 -1.2084 33 1 2.6433 1.0512 2.1001 34 1 1.7140 -4.7484 2.0701 35 1 3.6762 -4.2831 5.8297 36 1 3.3416 -0.8704 6.1111 37 1 4.9179 -1.1204 5.3229 38 1 6.1542 -3.4729 8.8205 39 1 3.5997 -2.2187 10.0596 40 1 4.1106 -3.9627 10.0803 41 1 7.2791 -1.8311 10.2496 42 1 5.8608 -0.6981 10.1794 43 1 5.2933 -0.8716 12.4879 44 1 3.8065 -1.8708 12.4100 45 1 6.6590 -4.4174 11.2130 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_17784174_484008.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:15:56 Heat of formation + Delta-G solvation = -158.531719 kcal Electronic energy + Delta-G solvation = -37221.852239 eV Core-core repulsion = 31799.500930 eV Total energy + Delta-G solvation = -5422.351309 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 466.028 amu Computer time = 1.66 seconds Orbital eigenvalues (eV) -43.33321 -43.09464 -41.65902 -40.16447 -39.98983 -39.38502 -38.10346 -37.87080 -37.45093 -34.63984 -34.43032 -33.66313 -33.12520 -30.73184 -30.03275 -28.36745 -27.47134 -27.03135 -26.20104 -25.50414 -24.42694 -23.61097 -22.59942 -22.15236 -20.97736 -20.58235 -19.54603 -19.05235 -18.98197 -18.63279 -18.02324 -17.90205 -17.79067 -17.55083 -17.43164 -17.22957 -16.74041 -16.50470 -16.34359 -16.20555 -16.05178 -15.48944 -15.31333 -15.27663 -15.23365 -15.11356 -14.88633 -14.53220 -14.46488 -14.18086 -14.11664 -13.99617 -13.90477 -13.46365 -13.39117 -12.94290 -12.75088 -12.42695 -12.23883 -12.09341 -12.08810 -11.97266 -11.80056 -11.75817 -11.68031 -11.52218 -11.42492 -11.26561 -10.69328 -10.43378 -10.41428 -10.39884 -9.57502 -5.13656 -0.84046 -0.69217 0.05038 0.34965 0.98254 1.11413 1.16694 1.41173 1.41291 1.53957 1.59527 1.65912 1.98124 2.28513 2.45657 2.68912 2.86895 3.11647 3.14800 3.20503 3.25575 3.33759 3.43564 3.49360 3.66076 3.68248 3.82270 3.90564 3.93175 4.00175 4.12277 4.19095 4.23286 4.28447 4.33417 4.41504 4.54021 4.56366 4.58817 4.64229 4.66409 4.67736 4.79962 4.84194 4.94140 5.03941 5.12726 5.34534 5.75722 5.77181 6.18040 6.32604 6.66538 6.76965 6.98527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.064 4.064 3 Si 0.805 3.195 4 C -0.342 4.342 5 C 0.180 3.820 6 O -0.199 6.199 7 C 0.166 3.834 8 C -0.227 4.227 9 C -0.012 4.012 10 C -0.121 4.121 11 Br -0.027 7.027 12 C -0.007 4.007 13 C -0.095 4.095 14 C 0.117 3.883 15 O -0.352 6.352 16 C 0.481 3.519 17 O -0.523 6.523 18 C -0.105 4.105 19 C -0.110 4.110 20 C 0.098 3.902 21 C -0.114 4.114 22 C 0.049 3.951 23 O -0.350 6.350 24 C 0.645 3.355 25 O -0.576 6.576 26 N -0.695 5.695 27 C 0.422 3.578 28 O -0.500 6.500 29 H 0.395 0.605 30 H 0.088 0.912 31 H -0.258 1.258 32 H -0.298 1.298 33 H 0.248 0.752 34 H 0.141 0.859 35 H 0.179 0.821 36 H 0.108 0.892 37 H 0.101 0.899 38 H 0.149 0.851 39 H 0.124 0.876 40 H 0.107 0.893 41 H 0.095 0.905 42 H 0.121 0.879 43 H 0.132 0.868 44 H 0.137 0.863 45 H 0.445 0.555 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.251 8.165 1.781 8.360 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.171 4.171 3 Si 0.706 3.294 4 C -0.345 4.345 5 C 0.115 3.885 6 O -0.101 6.101 7 C 0.120 3.880 8 C -0.230 4.230 9 C -0.032 4.032 10 C -0.201 4.201 11 Br 0.058 6.942 12 C -0.026 4.026 13 C -0.097 4.097 14 C 0.044 3.956 15 O -0.268 6.268 16 C 0.325 3.675 17 O -0.411 6.411 18 C -0.124 4.124 19 C -0.149 4.149 20 C 0.009 3.991 21 C -0.152 4.152 22 C -0.025 4.025 23 O -0.260 6.260 24 C 0.399 3.601 25 O -0.464 6.464 26 N -0.367 5.367 27 C 0.309 3.691 28 O -0.383 6.383 29 H 0.245 0.755 30 H 0.105 0.895 31 H -0.184 1.184 32 H -0.226 1.226 33 H 0.263 0.737 34 H 0.159 0.841 35 H 0.196 0.804 36 H 0.126 0.874 37 H 0.119 0.881 38 H 0.167 0.833 39 H 0.142 0.858 40 H 0.125 0.875 41 H 0.113 0.887 42 H 0.140 0.860 43 H 0.150 0.850 44 H 0.155 0.845 45 H 0.291 0.709 Dipole moment (debyes) X Y Z Total from point charges 0.745 7.616 1.335 7.768 hybrid contribution 0.006 -1.072 -1.522 1.862 sum 0.751 6.544 -0.187 6.589 Atomic orbital electron populations 1.86552 1.17666 1.82296 1.50146 1.25224 0.85247 1.11666 0.94932 0.94466 0.77869 0.70766 0.86340 1.21957 1.13742 0.96025 1.02775 1.24420 0.85207 0.98705 0.80183 1.83165 1.68074 1.20386 1.38506 1.18876 0.95181 0.80615 0.93291 1.20728 1.08387 0.95354 0.98539 1.21100 0.93264 0.93377 0.95452 1.21874 1.07198 0.92829 0.98183 1.96854 1.97483 1.03623 1.96193 1.21252 0.92012 0.90919 0.98412 1.18881 1.03491 0.93962 0.93358 1.21593 1.00355 0.90660 0.82995 1.86411 1.69681 1.42411 1.28320 1.23762 0.73594 0.86975 0.83168 1.90727 1.53457 1.17144 1.79749 1.22714 1.00684 1.00603 0.88413 1.23367 0.95946 1.06023 0.89527 1.22013 0.94995 0.87593 0.94456 1.23361 1.01991 0.99856 0.90011 1.24697 1.03223 0.95594 0.78944 1.87346 1.64776 1.38074 1.35773 1.18758 0.77627 0.80730 0.83017 1.91069 1.52076 1.41038 1.62232 1.45514 1.55982 1.30205 1.04961 1.18828 0.76388 0.89342 0.84576 1.90755 1.37421 1.67748 1.42364 0.75541 0.89465 1.18351 1.22576 0.73713 0.84132 0.80364 0.87399 0.88062 0.83312 0.85821 0.87491 0.88651 0.86045 0.84972 0.84548 0.70938 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.38 12.88 -148.98 -1.92 -3.30 16 2 C -0.06 0.02 2.46 71.23 0.17 0.19 16 3 Si 0.80 -6.61 29.86 68.60 2.05 -4.56 16 4 C -0.34 0.44 5.32 -19.78 -0.11 0.33 16 5 C 0.18 -1.76 9.99 66.97 0.67 -1.09 16 6 O -0.20 1.63 9.21 -2.69 -0.02 1.61 16 7 C 0.17 -0.61 6.74 22.98 0.15 -0.45 16 8 C -0.23 -0.52 5.89 -20.01 -0.12 -0.63 16 9 C -0.01 -0.03 9.40 22.45 0.21 0.18 16 10 C -0.12 0.11 6.22 22.32 0.14 0.25 16 11 Br -0.03 0.01 33.69 -20.37 -0.69 -0.68 16 12 C -0.01 0.03 9.10 22.32 0.20 0.24 16 13 C -0.10 0.59 5.89 -19.78 -0.12 0.47 16 14 C 0.12 -1.06 5.38 71.24 0.38 -0.67 16 15 O -0.35 3.23 8.68 -51.34 -0.45 2.78 16 16 C 0.48 -4.24 7.48 71.23 0.53 -3.71 16 17 O -0.52 1.60 15.65 21.94 0.34 1.94 16 18 C -0.11 1.48 4.26 -10.90 -0.05 1.43 16 19 C -0.11 1.72 7.08 30.90 0.22 1.94 16 20 C 0.10 -1.17 1.55 3.64 0.01 -1.17 16 21 C -0.11 1.49 6.84 30.85 0.21 1.71 16 22 C 0.05 -0.51 7.75 72.04 0.56 0.05 16 23 O -0.35 -0.67 11.11 -48.80 -0.54 -1.21 16 24 C 0.65 2.88 9.17 129.86 1.19 4.07 16 25 O -0.58 -8.86 18.04 19.65 0.35 -8.51 16 26 N -0.69 4.49 6.17 -553.03 -3.41 1.07 16 27 C 0.42 2.82 6.98 25.67 0.18 2.99 16 28 O -0.50 -7.90 16.93 -5.07 -0.09 -7.99 16 29 H 0.39 -3.27 8.70 -74.06 -0.64 -3.91 16 30 H 0.09 0.47 7.96 -2.38 -0.02 0.45 16 31 H -0.26 1.66 7.11 99.48 0.71 2.37 16 32 H -0.30 -0.34 7.11 99.48 0.71 0.37 16 33 H 0.25 -4.78 4.77 -2.91 -0.01 -4.79 16 34 H 0.14 0.70 7.81 -2.91 -0.02 0.68 16 35 H 0.18 -1.58 6.96 -2.91 -0.02 -1.60 16 36 H 0.11 -1.16 8.13 -2.39 -0.02 -1.18 16 37 H 0.10 -0.96 8.13 -2.39 -0.02 -0.98 16 38 H 0.15 -2.58 8.14 -2.39 -0.02 -2.60 16 39 H 0.12 -2.19 8.09 -2.39 -0.02 -2.21 16 40 H 0.11 -1.72 8.14 -2.39 -0.02 -1.74 16 41 H 0.09 -1.19 8.14 -2.39 -0.02 -1.21 16 42 H 0.12 -1.56 7.44 -2.39 -0.02 -1.58 16 43 H 0.13 -1.86 7.96 -2.39 -0.02 -1.88 16 44 H 0.14 -2.06 7.97 -2.39 -0.02 -2.08 16 45 H 0.45 -4.46 8.96 -92.71 -0.83 -5.30 16 Total: 0.00 -39.66 411.23 -0.23 -39.89 By element: Atomic # 1 Polarization: -26.87 SS G_CDS: -0.31 Total: -27.18 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: 4.45 Total: 6.13 kcal Atomic # 7 Polarization: 4.49 SS G_CDS: -3.41 Total: 1.07 kcal Atomic # 8 Polarization: -12.36 SS G_CDS: -2.32 Total: -14.67 kcal Atomic # 14 Polarization: -6.61 SS G_CDS: 2.05 Total: -4.56 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -39.66 -0.23 -39.89 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_17784174_484008.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.638 kcal (2) G-P(sol) polarization free energy of solvation -39.659 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -158.297 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.894 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds