Wall clock time and date at job start Sat Mar 6 2021 08:42:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.42902 * 109.47708 * 2 1 4 4 C 1.35901 * 116.99380 * 275.05159 * 3 2 1 5 5 C 1.38717 * 120.04848 * 185.43664 * 4 3 2 6 6 C 1.38164 * 119.94149 * 179.97438 * 5 4 3 7 7 C 1.50695 * 119.97321 * 180.02562 * 6 5 4 8 8 O 1.42900 * 109.47160 * 299.99902 * 7 6 5 9 9 Si 1.86305 * 109.47282 * 180.02562 * 7 6 5 10 10 C 1.38254 * 120.05501 * 359.97438 * 6 5 4 11 11 C 1.38278 * 120.11247 * 0.02562 * 10 6 5 12 12 C 1.38128 * 120.05462 * 359.97433 * 11 10 6 13 13 C 1.50705 * 109.47105 * 120.00061 * 2 1 3 14 14 O 1.20835 * 120.00006 * 245.00109 * 13 2 1 15 15 O 1.34230 * 120.00325 * 64.99510 * 13 2 1 16 16 C 1.45196 * 117.00090 * 180.02562 * 15 13 2 17 17 C 1.53006 * 109.46993 * 179.97438 * 16 15 13 18 18 H 1.09001 * 112.85015 * 316.19730 * 17 16 15 19 19 C 1.53781 * 113.60821 * 87.50361 * 17 16 15 20 20 C 1.53788 * 87.07936 * 139.97966 * 19 17 16 21 21 H 1.09001 * 113.68818 * 89.12217 * 20 19 17 22 22 O 1.42897 * 113.61753 * 220.01525 * 20 19 17 23 23 C 1.53778 * 113.61460 * 185.00023 * 17 16 15 24 24 H 1.08998 * 109.47379 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47197 * 300.00429 * 1 2 3 26 26 H 1.09005 * 109.46814 * 59.99872 * 1 2 3 27 27 H 1.09001 * 109.47197 * 239.99571 * 2 1 3 28 28 H 1.07996 * 120.03337 * 0.25542 * 5 4 3 29 29 H 1.08996 * 109.47324 * 59.99942 * 7 6 5 30 30 H 0.96696 * 114.00104 * 179.97438 * 8 7 6 31 31 H 1.48501 * 109.99784 * 298.67972 * 9 7 6 32 32 H 1.48497 * 109.99930 * 59.99943 * 9 7 6 33 33 H 1.07998 * 119.94133 * 179.97438 * 10 6 5 34 34 H 1.07999 * 119.97758 * 180.02562 * 11 10 6 35 35 H 1.07999 * 120.02498 * 180.02562 * 12 11 10 36 36 H 1.08999 * 109.47538 * 299.99807 * 16 15 13 37 37 H 1.09005 * 109.46946 * 60.00396 * 16 15 13 38 38 H 1.09004 * 113.61501 * 254.52701 * 19 17 16 39 39 H 1.09000 * 113.62158 * 25.43468 * 19 17 16 40 40 H 0.96703 * 114.00001 * 277.49896 * 22 20 19 41 41 H 1.09007 * 113.61505 * 334.57334 * 23 17 16 42 42 H 1.09001 * 113.61498 * 105.47044 * 23 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 2.1116 1.9643 -1.2062 5 6 2.6723 3.2302 -1.2923 6 6 2.7786 3.8553 -2.5199 7 6 3.3882 5.2302 -2.6143 8 8 2.6246 6.1450 -1.8256 9 14 3.3849 5.7903 -4.3912 10 6 2.3271 3.2200 -3.6618 11 6 1.7678 1.9582 -3.5786 12 6 1.6593 1.3290 -2.3537 13 6 2.0323 -0.7104 1.2305 14 8 2.6506 -0.1002 2.0704 15 8 1.7928 -2.0211 1.3936 16 6 2.3059 -2.6395 2.6030 17 6 1.9369 -4.1243 2.6126 18 1 0.9072 -4.3066 2.3051 19 6 2.9631 -5.0186 1.8969 20 6 2.7489 -6.0362 3.0299 21 1 1.9420 -6.7431 2.8368 22 8 3.9528 -6.6730 3.4625 23 6 2.3292 -4.8482 3.9114 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3634 0.5139 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 1.8933 -0.5139 -0.8900 28 1 3.0297 3.7248 -0.4013 29 1 4.4131 5.1995 -2.2446 30 1 2.9605 7.0517 -1.8393 31 1 4.2018 4.8650 -5.2169 32 1 1.9930 5.8366 -4.9065 33 1 2.4108 3.7105 -4.6203 34 1 1.4162 1.4638 -4.4721 35 1 1.2227 0.3433 -2.2894 36 1 3.3904 -2.5340 2.6330 37 1 1.8690 -2.1513 3.4742 38 1 2.6283 -5.3735 0.9221 39 1 3.9680 -4.5971 1.8728 40 1 4.2218 -7.4211 2.9119 41 1 3.1609 -4.3800 4.4381 42 1 1.4828 -5.0654 4.5630 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_2302812_11354868.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:42:38 Heat of formation + Delta-G solvation = -140.346076 kcal Electronic energy + Delta-G solvation = -24966.017519 eV Core-core repulsion = 21072.656179 eV Total energy + Delta-G solvation = -3893.361339 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.139 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.03634 -41.18032 -40.32701 -39.18307 -37.57971 -37.25408 -36.05815 -33.59567 -32.60705 -31.00014 -29.70733 -26.88903 -26.86760 -26.18948 -23.87450 -23.61858 -22.81273 -21.42565 -20.66053 -19.44051 -18.76043 -18.44657 -18.37958 -17.97840 -17.64531 -17.39410 -16.58787 -16.58176 -16.35391 -15.89758 -15.65544 -15.14630 -15.01627 -14.65682 -14.55851 -14.42674 -14.09160 -13.76543 -13.61933 -13.58597 -13.58122 -13.14247 -13.02409 -12.86216 -12.51717 -12.41942 -12.24739 -12.16621 -12.12785 -11.81474 -11.74371 -11.37100 -11.31985 -10.85574 -10.43064 -9.91064 -9.33544 -4.98516 0.13621 0.32878 0.96656 1.04684 1.25862 1.62555 1.95304 2.28635 2.57949 3.04653 3.27343 3.33426 3.36468 3.43366 3.50490 3.60236 3.71457 3.76094 3.78896 3.79195 3.92526 4.05990 4.12656 4.13182 4.18945 4.32387 4.37171 4.41726 4.47679 4.52537 4.58600 4.64528 4.65066 4.83256 4.88818 4.92193 4.98013 5.16507 5.18913 5.27629 5.31222 5.38644 5.56973 6.21472 6.60387 6.61099 6.62870 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.095 3.905 3 O -0.287 6.287 4 C 0.131 3.869 5 C -0.115 4.115 6 C -0.035 4.035 7 C -0.075 4.075 8 O -0.544 6.544 9 Si 0.689 3.311 10 C -0.159 4.159 11 C -0.070 4.070 12 C -0.207 4.207 13 C 0.466 3.534 14 O -0.480 6.480 15 O -0.350 6.350 16 C 0.080 3.920 17 C -0.111 4.111 18 H 0.108 0.892 19 C -0.165 4.165 20 C 0.077 3.923 21 H 0.086 0.914 22 O -0.560 6.560 23 C -0.120 4.120 24 H 0.090 0.910 25 H 0.077 0.923 26 H 0.082 0.918 27 H 0.113 0.887 28 H 0.138 0.862 29 H 0.078 0.922 30 H 0.384 0.616 31 H -0.255 1.255 32 H -0.250 1.250 33 H 0.121 0.879 34 H 0.132 0.868 35 H 0.135 0.865 36 H 0.076 0.924 37 H 0.077 0.923 38 H 0.075 0.925 39 H 0.091 0.909 40 H 0.381 0.619 41 H 0.095 0.905 42 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.695 -1.366 -3.637 3.947 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.037 3.963 3 O -0.201 6.201 4 C 0.087 3.913 5 C -0.134 4.134 6 C -0.035 4.035 7 C -0.185 4.185 8 O -0.350 6.350 9 Si 0.590 3.410 10 C -0.177 4.177 11 C -0.088 4.088 12 C -0.225 4.225 13 C 0.306 3.694 14 O -0.365 6.365 15 O -0.267 6.267 16 C 0.006 3.994 17 C -0.129 4.129 18 H 0.126 0.874 19 C -0.203 4.203 20 C 0.018 3.982 21 H 0.104 0.896 22 O -0.365 6.365 23 C -0.158 4.158 24 H 0.108 0.892 25 H 0.096 0.904 26 H 0.101 0.899 27 H 0.130 0.870 28 H 0.156 0.844 29 H 0.096 0.904 30 H 0.231 0.769 31 H -0.180 1.180 32 H -0.175 1.175 33 H 0.138 0.862 34 H 0.150 0.850 35 H 0.153 0.847 36 H 0.095 0.905 37 H 0.096 0.904 38 H 0.094 0.906 39 H 0.110 0.890 40 H 0.228 0.772 41 H 0.113 0.887 42 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.039 -1.422 -3.392 3.822 hybrid contribution -0.002 -1.003 -0.061 1.004 sum -1.041 -2.425 -3.453 4.346 Atomic orbital electron populations 1.22353 0.91158 1.04820 1.05003 1.21636 0.96409 0.82642 0.95579 1.86171 1.81310 1.25089 1.27484 1.18964 0.95912 0.92760 0.83701 1.20250 1.02037 0.92688 0.98410 1.19151 0.97628 0.94019 0.92698 1.24743 0.96475 0.88969 1.08343 1.86498 1.55152 1.21867 1.71523 0.95277 0.82273 0.89247 0.74198 1.20814 1.02754 0.96790 0.97347 1.20856 0.96583 0.94080 0.97294 1.21337 1.06747 1.01892 0.92569 1.22967 0.77602 0.81161 0.87676 1.90744 1.36152 1.66733 1.42878 1.86429 1.72577 1.23271 1.44443 1.23172 0.99551 0.92068 0.84560 1.22382 1.01030 0.91193 0.98311 0.87387 1.23807 0.99956 0.97577 0.98930 1.23279 0.87517 0.92534 0.94913 0.89642 1.86532 1.42276 1.50358 1.57354 1.23079 1.02032 0.94779 0.95886 0.89156 0.90406 0.89891 0.87003 0.84370 0.90429 0.76860 1.17952 1.17457 0.86161 0.84979 0.84721 0.90531 0.90446 0.90648 0.89008 0.77158 0.88652 0.89933 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.19 9.15 37.15 0.34 0.53 16 2 C 0.10 0.09 2.75 -27.88 -0.08 0.02 16 3 O -0.29 -1.12 9.34 -39.33 -0.37 -1.48 16 4 C 0.13 0.42 6.60 -39.22 -0.26 0.16 16 5 C -0.12 -0.43 9.55 -39.43 -0.38 -0.80 16 6 C -0.03 -0.10 5.42 -104.65 -0.57 -0.67 16 7 C -0.07 -0.03 2.81 36.00 0.10 0.07 16 8 O -0.54 -0.41 12.74 -35.23 -0.45 -0.86 16 9 Si 0.69 -0.65 29.79 -169.99 -5.06 -5.72 16 10 C -0.16 -0.38 8.67 -39.56 -0.34 -0.73 16 11 C -0.07 -0.08 10.04 -39.61 -0.40 -0.48 16 12 C -0.21 -0.24 8.24 -39.43 -0.33 -0.56 16 13 C 0.47 1.39 7.29 36.01 0.26 1.65 16 14 O -0.48 -3.18 16.26 -25.47 -0.41 -3.59 16 15 O -0.35 -0.45 10.21 -39.26 -0.40 -0.85 16 16 C 0.08 0.04 5.30 37.16 0.20 0.23 16 17 C -0.11 0.14 4.02 -89.81 -0.36 -0.22 16 18 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 19 C -0.17 0.20 7.46 -25.92 -0.19 0.01 16 20 C 0.08 -0.08 5.21 -25.92 -0.14 -0.22 16 21 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 22 O -0.56 -0.24 13.67 -35.23 -0.48 -0.73 16 23 C -0.12 0.12 7.47 -25.92 -0.19 -0.08 16 24 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 25 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 26 H 0.08 -0.14 6.91 -51.93 -0.36 -0.50 16 27 H 0.11 -0.14 6.31 -51.93 -0.33 -0.47 16 28 H 0.14 0.51 8.06 -52.49 -0.42 0.08 16 29 H 0.08 -0.09 7.96 -51.93 -0.41 -0.50 16 30 H 0.38 -1.71 8.74 45.56 0.40 -1.31 16 31 H -0.25 -0.34 7.11 56.52 0.40 0.07 16 32 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 33 H 0.12 0.20 4.87 -52.49 -0.26 -0.06 16 34 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 35 H 0.14 -0.20 5.43 -52.49 -0.29 -0.48 16 36 H 0.08 0.08 7.84 -51.93 -0.41 -0.33 16 37 H 0.08 0.04 8.13 -51.93 -0.42 -0.39 16 38 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.09 -0.03 7.90 -51.93 -0.41 -0.44 16 40 H 0.38 -1.37 9.12 45.56 0.42 -0.96 16 41 H 0.09 -0.01 8.10 -51.93 -0.42 -0.43 16 42 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 LS Contribution 352.50 15.07 5.31 5.31 Total: 0.00 -9.71 352.50 -9.26 -18.97 By element: Atomic # 1 Polarization: -4.90 SS G_CDS: -5.07 Total: -9.97 kcal Atomic # 6 Polarization: 1.24 SS G_CDS: -2.33 Total: -1.09 kcal Atomic # 8 Polarization: -5.39 SS G_CDS: -2.11 Total: -7.51 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.06 Total: -5.72 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -9.71 -9.26 -18.97 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_2302812_11354868.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.377 kcal (2) G-P(sol) polarization free energy of solvation -9.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.087 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.259 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.969 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.346 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds