Wall clock time and date at job start Sat Mar 6 2021 08:03:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 O 1.42891 * 109.47158 * 2 1 4 4 C 1.35901 * 117.00388 * 275.32484 * 3 2 1 5 5 C 1.38713 * 120.05114 * 5.08592 * 4 3 2 6 6 C 1.38168 * 119.94118 * 179.72350 * 5 4 3 7 7 C 1.50704 * 119.97428 * 180.27018 * 6 5 4 8 8 O 1.42905 * 109.46745 * 65.29872 * 7 6 5 9 9 Si 1.86301 * 109.47294 * 185.29839 * 7 6 5 10 10 C 1.38246 * 120.05728 * 0.57101 * 6 5 4 11 11 C 1.38288 * 120.11043 * 359.67996 * 10 6 5 12 12 C 1.38129 * 120.05382 * 0.04917 * 11 10 6 13 13 C 1.50700 * 109.47186 * 120.00378 * 2 1 3 14 14 O 1.20826 * 119.99897 * 244.99918 * 13 2 1 15 15 O 1.34229 * 120.00000 * 64.99733 * 13 2 1 16 16 C 1.45202 * 116.99696 * 180.02562 * 15 13 2 17 17 C 1.53001 * 109.47163 * 180.02562 * 16 15 13 18 18 H 1.08996 * 109.46817 * 305.00174 * 17 16 15 19 19 C 1.53001 * 109.46995 * 64.99848 * 17 16 15 20 20 C 1.53001 * 109.46995 * 179.97438 * 19 17 16 21 21 C 1.52998 * 109.47365 * 300.00135 * 20 19 17 22 22 H 1.08995 * 109.46788 * 299.99930 * 21 20 19 23 23 O 1.42895 * 109.46924 * 179.97438 * 21 20 19 24 24 C 1.52997 * 109.46836 * 59.99887 * 21 20 19 25 25 C 1.52997 * 109.47445 * 299.99925 * 24 21 20 26 26 H 1.08999 * 109.47148 * 60.00065 * 1 2 3 27 27 H 1.09004 * 109.47135 * 180.02562 * 1 2 3 28 28 H 1.08996 * 109.47239 * 299.99685 * 1 2 3 29 29 H 1.09001 * 109.46614 * 239.99995 * 2 1 3 30 30 H 1.08001 * 120.02976 * 359.97438 * 5 4 3 31 31 H 1.09007 * 109.47010 * 305.30338 * 7 6 5 32 32 H 0.96699 * 113.99810 * 179.97438 * 8 7 6 33 33 H 1.48498 * 109.99615 * 178.68159 * 9 7 6 34 34 H 1.48503 * 110.00020 * 300.00136 * 9 7 6 35 35 H 1.07997 * 119.94559 * 179.69931 * 10 6 5 36 36 H 1.07999 * 119.97402 * 180.02562 * 11 10 6 37 37 H 1.07996 * 120.02821 * 180.02562 * 12 11 10 38 38 H 1.08996 * 109.47587 * 60.00040 * 16 15 13 39 39 H 1.09002 * 109.46993 * 300.00022 * 16 15 13 40 40 H 1.09003 * 109.47030 * 300.00084 * 19 17 16 41 41 H 1.08995 * 109.47299 * 59.99984 * 19 17 16 42 42 H 1.08998 * 109.46986 * 179.97438 * 20 19 17 43 43 H 1.09006 * 109.46811 * 60.00238 * 20 19 17 44 44 H 0.96700 * 113.99979 * 60.00479 * 23 21 20 45 45 H 1.09003 * 109.47125 * 180.02562 * 24 21 20 46 46 H 1.08995 * 109.47397 * 60.00415 * 24 21 20 47 47 H 1.09005 * 109.47217 * 300.00684 * 25 24 21 48 48 H 1.08999 * 109.47270 * 180.02562 * 25 24 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 2.1061 1.9664 -1.2056 5 6 1.6545 1.3304 -2.3527 6 6 1.7518 1.9644 -3.5764 7 6 1.2557 1.2766 -4.8223 8 8 -0.1609 1.1070 -4.7407 9 14 1.6722 2.3145 -6.3123 10 6 2.3094 3.2266 -3.6600 11 6 2.7652 3.8607 -2.5186 12 6 2.6651 3.2334 -1.2920 13 6 2.0324 -0.7105 1.2304 14 8 2.6507 -0.1003 2.0702 15 8 1.7929 -2.0211 1.3934 16 6 2.3061 -2.6396 2.6027 17 6 1.9383 -4.1247 2.6117 18 1 0.8603 -4.2327 2.4920 19 6 2.6529 -4.8340 1.4597 20 6 2.2856 -6.3193 1.4690 21 6 2.7168 -6.9430 2.7979 22 1 3.7948 -6.8345 2.9173 23 8 2.3732 -8.3300 2.8068 24 6 2.0022 -6.2336 3.9498 25 6 2.3695 -4.7484 3.9406 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 1.8933 -0.5139 -0.8900 30 1 1.2235 0.3422 -2.2886 31 1 1.7338 0.3012 -4.9136 32 1 -0.5496 0.6701 -5.5108 33 1 1.2165 1.6319 -7.5499 34 1 1.0263 3.6469 -6.1998 35 1 2.3890 3.7185 -4.6181 36 1 3.2000 4.8469 -2.5864 37 1 3.0207 3.7291 -0.4009 38 1 1.8693 -2.1515 3.4740 39 1 3.3906 -2.5340 2.6328 40 1 2.3460 -4.3894 0.5130 41 1 3.7309 -4.7260 1.5793 42 1 2.7944 -6.8245 0.6481 43 1 1.2076 -6.4277 1.3496 44 1 2.7912 -8.8432 2.1018 45 1 2.3097 -6.6776 4.8966 46 1 0.9242 -6.3421 3.8305 47 1 3.4475 -4.6399 4.0599 48 1 1.8607 -4.2432 4.7615 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_2302812_16737258.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:03:45 Heat of formation + Delta-G solvation = -183.877667 kcal Electronic energy + Delta-G solvation = -29250.041816 eV Core-core repulsion = 25043.717567 eV Total energy + Delta-G solvation = -4206.324249 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.170 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.02136 -41.14057 -40.13638 -39.13431 -37.78528 -37.44646 -36.59175 -33.70535 -32.44781 -31.94240 -31.81851 -31.02519 -27.20992 -26.89991 -25.75820 -24.02262 -23.74190 -22.49897 -22.35935 -21.72348 -20.96322 -19.29693 -18.66554 -18.48684 -18.26763 -18.05465 -17.64813 -17.15300 -16.72867 -16.62535 -16.29492 -15.93201 -15.59451 -15.53490 -15.17451 -15.02169 -14.82014 -14.55739 -14.27998 -14.03873 -13.93660 -13.87486 -13.53806 -13.46471 -13.38364 -13.33548 -13.19382 -12.88893 -12.63881 -12.54916 -12.24687 -12.23843 -11.96755 -11.91874 -11.78819 -11.68145 -11.61554 -11.32210 -11.20304 -10.78818 -10.59665 -9.93161 -9.28278 -5.00881 0.21993 0.35020 1.00065 1.06000 1.21384 1.54817 1.90413 2.33234 2.60502 3.07564 3.24192 3.31031 3.49799 3.51862 3.61929 3.64333 3.64578 3.71008 3.85970 3.96214 4.04301 4.05857 4.17191 4.20145 4.24290 4.26003 4.29252 4.32184 4.35339 4.38169 4.44455 4.49059 4.53480 4.63037 4.68079 4.83368 4.88980 4.93041 4.94996 4.96710 5.04898 5.05049 5.19574 5.20743 5.25798 5.34457 5.35588 5.46543 5.66360 6.24081 6.34857 6.63823 6.65706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.096 3.904 3 O -0.288 6.288 4 C 0.128 3.872 5 C -0.184 4.184 6 C -0.033 4.033 7 C -0.079 4.079 8 O -0.535 6.535 9 Si 0.687 3.313 10 C -0.150 4.150 11 C -0.072 4.072 12 C -0.140 4.140 13 C 0.466 3.534 14 O -0.481 6.481 15 O -0.349 6.349 16 C 0.072 3.928 17 C -0.089 4.089 18 H 0.087 0.913 19 C -0.113 4.113 20 C -0.152 4.152 21 C 0.102 3.898 22 H 0.055 0.945 23 O -0.569 6.569 24 C -0.111 4.111 25 C -0.111 4.111 26 H 0.084 0.916 27 H 0.089 0.911 28 H 0.076 0.924 29 H 0.112 0.888 30 H 0.133 0.867 31 H 0.077 0.923 32 H 0.381 0.619 33 H -0.261 1.261 34 H -0.254 1.254 35 H 0.130 0.870 36 H 0.138 0.862 37 H 0.136 0.864 38 H 0.076 0.924 39 H 0.075 0.925 40 H 0.074 0.926 41 H 0.065 0.935 42 H 0.067 0.933 43 H 0.072 0.928 44 H 0.379 0.621 45 H 0.074 0.926 46 H 0.072 0.928 47 H 0.070 0.930 48 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.777 -2.144 -3.790 4.703 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.038 3.962 3 O -0.202 6.202 4 C 0.084 3.916 5 C -0.203 4.203 6 C -0.033 4.033 7 C -0.189 4.189 8 O -0.342 6.342 9 Si 0.588 3.412 10 C -0.168 4.168 11 C -0.090 4.090 12 C -0.158 4.158 13 C 0.307 3.693 14 O -0.366 6.366 15 O -0.267 6.267 16 C -0.002 4.002 17 C -0.107 4.107 18 H 0.105 0.895 19 C -0.150 4.150 20 C -0.190 4.190 21 C 0.044 3.956 22 H 0.073 0.927 23 O -0.375 6.375 24 C -0.149 4.149 25 C -0.148 4.148 26 H 0.103 0.897 27 H 0.107 0.893 28 H 0.095 0.905 29 H 0.129 0.871 30 H 0.151 0.849 31 H 0.095 0.905 32 H 0.229 0.771 33 H -0.187 1.187 34 H -0.178 1.178 35 H 0.147 0.853 36 H 0.156 0.844 37 H 0.154 0.846 38 H 0.094 0.906 39 H 0.093 0.907 40 H 0.093 0.907 41 H 0.084 0.916 42 H 0.085 0.915 43 H 0.091 0.909 44 H 0.226 0.774 45 H 0.093 0.907 46 H 0.091 0.909 47 H 0.089 0.911 48 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 1.453 -0.991 -2.897 3.389 hybrid contribution -0.703 -0.930 -0.593 1.308 sum 0.750 -1.921 -3.490 4.054 Atomic orbital electron populations 1.22354 0.91197 1.04812 1.05013 1.21613 0.96385 0.82699 0.95478 1.86159 1.81352 1.25043 1.27612 1.18986 0.96154 0.92979 0.83522 1.21096 1.05569 1.01855 0.91788 1.19007 0.97059 0.94018 0.93230 1.24848 0.84207 1.05251 1.04558 1.86588 1.19170 1.82680 1.45807 0.94886 0.92080 0.79352 0.74892 1.20954 1.02133 0.94672 0.99013 1.20949 0.97398 0.99653 0.90990 1.20543 1.02748 0.93330 0.99189 1.22968 0.77535 0.81154 0.87665 1.90735 1.36220 1.66734 1.42907 1.86423 1.72584 1.23272 1.44393 1.23249 0.99652 0.92757 0.84504 1.21282 1.02126 0.91084 0.96220 0.89465 1.21540 1.00348 0.94476 0.98659 1.22276 1.02708 0.96146 0.97835 1.21847 0.97893 0.81112 0.94790 0.92680 1.86521 1.74383 1.19957 1.56618 1.21438 1.01399 0.93804 0.98217 1.21480 1.02141 0.95011 0.96204 0.89743 0.89255 0.90516 0.87099 0.84941 0.90509 0.77149 1.18654 1.17848 0.85254 0.84440 0.84578 0.90609 0.90707 0.90721 0.91647 0.91463 0.90883 0.77370 0.90729 0.90884 0.91122 0.90594 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.11 9.15 37.16 0.34 0.45 16 2 C 0.10 0.08 2.75 -27.88 -0.08 0.01 16 3 O -0.29 -0.94 9.34 -39.33 -0.37 -1.31 16 4 C 0.13 0.30 6.60 -39.22 -0.26 0.04 16 5 C -0.18 -0.24 7.88 -39.43 -0.31 -0.55 16 6 C -0.03 -0.03 5.38 -104.64 -0.56 -0.60 16 7 C -0.08 0.05 2.79 36.01 0.10 0.15 16 8 O -0.54 -0.26 12.81 -35.23 -0.45 -0.71 16 9 Si 0.69 -0.90 29.85 -169.99 -5.07 -5.97 16 10 C -0.15 -0.06 8.67 -39.56 -0.34 -0.40 16 11 C -0.07 -0.01 10.04 -39.60 -0.40 -0.41 16 12 C -0.14 -0.21 9.99 -39.43 -0.39 -0.61 16 13 C 0.47 1.19 7.29 36.01 0.26 1.46 16 14 O -0.48 -2.90 16.26 -25.46 -0.41 -3.31 16 15 O -0.35 -0.29 9.76 -39.25 -0.38 -0.68 16 16 C 0.07 -0.01 4.84 37.16 0.18 0.17 16 17 C -0.09 0.14 2.44 -90.62 -0.22 -0.09 16 18 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 19 C -0.11 0.19 5.10 -26.73 -0.14 0.05 16 20 C -0.15 0.23 5.54 -26.73 -0.15 0.09 16 21 C 0.10 -0.07 3.47 -26.73 -0.09 -0.16 16 22 H 0.06 -0.06 8.14 -51.93 -0.42 -0.49 16 23 O -0.57 -0.39 13.32 -35.23 -0.47 -0.86 16 24 C -0.11 0.08 5.57 -26.73 -0.15 -0.07 16 25 C -0.11 0.21 5.20 -26.73 -0.14 0.07 16 26 H 0.08 -0.05 6.91 -51.93 -0.36 -0.41 16 27 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 29 H 0.11 -0.14 6.31 -51.93 -0.33 -0.46 16 30 H 0.13 -0.02 5.43 -52.49 -0.29 -0.31 16 31 H 0.08 -0.18 7.96 -51.92 -0.41 -0.59 16 32 H 0.38 -1.31 8.74 45.56 0.40 -0.91 16 33 H -0.26 -0.18 7.11 56.52 0.40 0.23 16 34 H -0.25 -0.46 7.05 56.52 0.40 -0.06 16 35 H 0.13 -0.17 4.86 -52.49 -0.26 -0.43 16 36 H 0.14 -0.32 8.06 -52.49 -0.42 -0.74 16 37 H 0.14 0.09 8.06 -52.49 -0.42 -0.33 16 38 H 0.08 -0.01 8.13 -51.93 -0.42 -0.43 16 39 H 0.07 0.00 8.13 -51.93 -0.42 -0.43 16 40 H 0.07 -0.10 7.82 -51.93 -0.41 -0.51 16 41 H 0.06 -0.11 8.14 -51.93 -0.42 -0.54 16 42 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 43 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 44 H 0.38 -1.19 9.08 45.56 0.41 -0.78 16 45 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 46 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 47 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 48 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 LS Contribution 387.23 15.07 5.84 5.84 Total: 0.00 -8.81 387.23 -10.45 -19.25 By element: Atomic # 1 Polarization: -5.06 SS G_CDS: -6.78 Total: -11.83 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -2.35 Total: -0.41 kcal Atomic # 8 Polarization: -4.79 SS G_CDS: -2.08 Total: -6.87 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.07 Total: -5.97 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -8.81 -10.45 -19.25 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_2302812_16737258.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -164.624 kcal (2) G-P(sol) polarization free energy of solvation -8.808 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -173.432 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.446 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.254 kcal (6) G-S(sol) free energy of system = (1) + (5) -183.878 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds