Wall clock time and date at job start Sat Mar 6 2021 08:48:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.42898 * 114.00138 * 2 1 4 4 C 1.53006 * 112.84974 * 68.04986 * 3 2 1 5 5 F 1.39896 * 109.46857 * 283.18011 * 4 3 2 6 6 F 1.39901 * 109.46908 * 43.17864 * 4 3 2 7 7 F 1.39896 * 109.47416 * 163.17774 * 4 3 2 8 8 C 1.53779 * 113.61708 * 296.85387 * 3 2 1 9 9 C 1.53778 * 87.08308 * 270.88383 * 8 3 2 10 10 H 1.09004 * 113.61049 * 219.93339 * 9 8 3 11 11 C 1.52995 * 113.61477 * 89.11254 * 9 8 3 12 12 O 1.45203 * 109.46822 * 176.53087 * 11 9 8 13 13 C 1.34236 * 116.99996 * 179.97438 * 12 11 9 14 14 O 1.20831 * 119.99791 * 0.02562 * 13 12 11 15 15 C 1.50699 * 119.99878 * 179.97438 * 13 12 11 16 16 C 1.53000 * 109.47154 * 65.00601 * 15 13 12 17 17 O 1.42905 * 109.46807 * 185.00196 * 15 13 12 18 18 C 1.35897 * 116.99778 * 155.04366 * 17 15 13 19 19 C 1.38711 * 120.05855 * 4.94312 * 18 17 15 20 20 C 1.38163 * 119.94690 * 179.76651 * 19 18 17 21 21 C 1.50700 * 119.97597 * 180.23265 * 20 19 18 22 22 O 1.42903 * 109.46877 * 300.25085 * 21 20 19 23 23 Si 1.86296 * 109.47419 * 180.25295 * 21 20 19 24 24 C 1.38253 * 120.05371 * 0.48070 * 20 19 18 25 25 C 1.38288 * 120.10942 * 359.76921 * 24 20 19 26 26 C 1.38126 * 120.05598 * 0.02562 * 25 24 20 27 27 C 1.53783 * 87.16897 * 334.52121 * 9 8 3 28 28 H 1.09002 * 109.46935 * 183.48324 * 1 2 3 29 29 H 1.08996 * 109.47380 * 303.48461 * 1 2 3 30 30 H 1.09006 * 109.47055 * 63.48849 * 1 2 3 31 31 H 1.08999 * 113.61643 * 156.32630 * 8 3 2 32 32 H 1.09003 * 113.61168 * 25.43085 * 8 3 2 33 33 H 1.09004 * 109.47528 * 56.53350 * 11 9 8 34 34 H 1.08997 * 109.47718 * 296.52865 * 11 9 8 35 35 H 1.09004 * 109.47185 * 304.99942 * 15 13 12 36 36 H 1.08995 * 109.46962 * 179.97438 * 16 15 13 37 37 H 1.09003 * 109.46460 * 299.99293 * 16 15 13 38 38 H 1.09000 * 109.47129 * 59.99576 * 16 15 13 39 39 H 1.08004 * 120.02583 * 359.97438 * 19 18 17 40 40 H 1.09001 * 109.46936 * 60.24717 * 21 20 19 41 41 H 0.96704 * 114.00137 * 300.00129 * 22 21 20 42 42 H 1.48495 * 110.00244 * 179.97438 * 23 21 20 43 43 H 1.48502 * 109.99856 * 301.31878 * 23 21 20 44 44 H 1.07999 * 119.94258 * 179.74779 * 24 20 19 45 45 H 1.07995 * 119.97022 * 179.97438 * 25 24 20 46 46 H 1.08002 * 120.02385 * 179.97438 * 26 25 24 47 47 H 1.09005 * 113.60751 * 140.02497 * 27 9 8 48 48 H 1.08996 * 113.61782 * 270.92185 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7704 2.0626 1.3078 5 9 0.4566 2.5424 1.3346 6 9 1.9740 1.1999 2.3901 7 9 2.6613 3.1377 1.3944 8 6 1.6794 2.1271 -1.2570 9 6 2.9350 1.5100 -1.8952 10 1 3.5113 2.2146 -2.4948 11 6 2.6676 0.1907 -2.6225 12 8 3.8901 -0.2683 -3.2574 13 6 3.8256 -1.4214 -3.9416 14 8 2.7820 -2.0268 -4.0081 15 6 5.0544 -1.9602 -4.6277 16 6 6.1063 -2.3242 -3.5780 17 8 4.7081 -3.1254 -5.3790 18 6 5.5028 -3.4362 -6.4367 19 6 6.6504 -2.6975 -6.6842 20 6 7.4593 -3.0185 -7.7573 21 6 8.7091 -2.2197 -8.0237 22 8 8.3616 -0.8512 -8.2443 23 14 9.5669 -2.8937 -9.5338 24 6 7.1203 -4.0688 -8.5900 25 6 5.9740 -4.8035 -8.3485 26 6 5.1643 -4.4892 -7.2744 27 6 3.4777 1.3276 -0.4679 28 1 -0.3633 -1.0258 0.0624 29 1 -0.3634 0.5669 0.8571 30 1 -0.3633 0.4588 -0.9197 31 1 1.7507 3.2042 -1.1059 32 1 0.7506 1.8275 -1.7426 33 1 1.8994 0.3430 -3.3807 34 1 2.3276 -0.5569 -1.9059 35 1 5.4578 -1.2018 -5.2988 36 1 6.9949 -2.7143 -4.0743 37 1 6.3704 -1.4353 -3.0050 38 1 5.7028 -3.0825 -2.9071 39 1 6.9133 -1.8741 -6.0365 40 1 9.3760 -2.2912 -7.1645 41 1 7.7686 -0.7121 -8.9953 42 1 10.8007 -2.1140 -9.8075 43 1 9.9050 -4.3252 -9.3293 44 1 7.7517 -4.3156 -9.4307 45 1 5.7111 -5.6232 -9.0006 46 1 4.2689 -5.0631 -7.0865 47 1 4.0000 0.3828 -0.3169 48 1 4.0400 2.1864 -0.1015 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_2302812_17321610.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:48:28 Heat of formation + Delta-G solvation = -276.421090 kcal Electronic energy + Delta-G solvation = -37397.724314 eV Core-core repulsion = 31779.025154 eV Total energy + Delta-G solvation = -5618.699160 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.142 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -51.19368 -48.74364 -48.62240 -42.13519 -41.59035 -40.89529 -39.22396 -37.78721 -37.36932 -36.92638 -33.66831 -32.31117 -31.09837 -30.74287 -28.40689 -27.61076 -26.94057 -26.92846 -25.97190 -23.97014 -23.33895 -22.63186 -21.80783 -20.76652 -19.81724 -19.53255 -19.46516 -19.26809 -18.53256 -18.33727 -17.82354 -17.50827 -17.28958 -17.15574 -16.60327 -16.51602 -16.26053 -16.15843 -15.87843 -15.70437 -15.64296 -15.53585 -15.41555 -15.11771 -14.89884 -14.82233 -14.75914 -14.68397 -14.47551 -14.28919 -14.16305 -14.11605 -13.57449 -13.55528 -13.43913 -13.28413 -13.11367 -12.88279 -12.85632 -12.65131 -12.47858 -12.21536 -12.18785 -11.97586 -11.82493 -11.74044 -11.72163 -11.35928 -10.88837 -10.55327 -9.97729 -9.32989 -5.07470 0.17564 0.29577 0.94483 1.04953 1.23640 1.52096 1.59424 1.92557 1.95541 2.26375 2.49770 2.59012 2.61575 2.77440 3.07036 3.22086 3.32840 3.36043 3.47531 3.52563 3.55930 3.61079 3.69020 3.84956 3.97557 4.04958 4.08805 4.12772 4.15616 4.20646 4.25968 4.28668 4.32553 4.39461 4.42015 4.44984 4.47775 4.51467 4.58900 4.62175 4.64722 4.81149 4.85329 4.90687 5.16604 5.27001 5.29385 5.39746 5.58123 5.62113 6.20544 6.48135 6.62048 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.332 6.332 3 C 0.037 3.963 4 C 0.438 3.562 5 F -0.181 7.181 6 F -0.174 7.174 7 F -0.175 7.175 8 C -0.143 4.143 9 C -0.100 4.100 10 H 0.109 0.891 11 C 0.078 3.922 12 O -0.349 6.349 13 C 0.468 3.532 14 O -0.480 6.480 15 C 0.096 3.904 16 C -0.176 4.176 17 O -0.288 6.288 18 C 0.129 3.871 19 C -0.186 4.186 20 C -0.080 4.080 21 C -0.071 4.071 22 O -0.539 6.539 23 Si 0.692 3.308 24 C -0.153 4.153 25 C -0.072 4.072 26 C -0.140 4.140 27 C -0.112 4.112 28 H 0.103 0.897 29 H 0.055 0.945 30 H 0.055 0.945 31 H 0.115 0.885 32 H 0.096 0.904 33 H 0.077 0.923 34 H 0.094 0.906 35 H 0.114 0.886 36 H 0.081 0.919 37 H 0.090 0.910 38 H 0.077 0.923 39 H 0.135 0.865 40 H 0.115 0.885 41 H 0.380 0.620 42 H -0.255 1.255 43 H -0.257 1.257 44 H 0.129 0.871 45 H 0.137 0.863 46 H 0.136 0.864 47 H 0.099 0.901 48 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.468 1.479 -3.968 4.261 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.250 6.250 3 C -0.006 4.006 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.180 4.180 9 C -0.119 4.119 10 H 0.127 0.873 11 C 0.005 3.995 12 O -0.266 6.266 13 C 0.308 3.692 14 O -0.364 6.364 15 C 0.038 3.962 16 C -0.233 4.233 17 O -0.202 6.202 18 C 0.084 3.916 19 C -0.204 4.204 20 C -0.080 4.080 21 C -0.182 4.182 22 O -0.345 6.345 23 Si 0.594 3.406 24 C -0.170 4.170 25 C -0.090 4.090 26 C -0.159 4.159 27 C -0.149 4.149 28 H 0.121 0.879 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.133 0.867 32 H 0.114 0.886 33 H 0.096 0.904 34 H 0.113 0.887 35 H 0.131 0.869 36 H 0.100 0.900 37 H 0.109 0.891 38 H 0.096 0.904 39 H 0.153 0.847 40 H 0.132 0.868 41 H 0.227 0.773 42 H -0.180 1.180 43 H -0.182 1.182 44 H 0.147 0.853 45 H 0.155 0.845 46 H 0.154 0.846 47 H 0.118 0.882 48 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 1.154 0.773 -3.654 3.909 hybrid contribution -0.558 0.398 1.121 1.314 sum 0.596 1.171 -2.533 2.854 Atomic orbital electron populations 1.23167 0.79328 1.04581 1.01560 1.88092 1.21306 1.21813 1.93798 1.24107 1.00275 0.86553 0.89647 1.21153 0.74131 0.78452 0.87944 1.93186 1.37087 1.89065 1.96934 1.93224 1.94566 1.69535 1.58154 1.93179 1.68349 1.57442 1.96631 1.23598 0.99725 1.01104 0.93597 1.22112 0.97689 0.96415 0.95656 0.87300 1.23070 0.83985 0.95708 0.96757 1.86390 1.39816 1.38079 1.62324 1.22937 0.89814 0.79235 0.77214 1.90739 1.31260 1.57684 1.56756 1.21630 0.91291 0.88765 0.94539 1.22346 0.97948 1.04305 0.98710 1.86164 1.51725 1.42435 1.39839 1.19017 0.90026 0.95223 0.87300 1.21118 0.95880 1.02448 1.00993 1.20133 0.96717 0.96209 0.94941 1.25108 0.97634 0.85455 1.09987 1.86500 1.70310 1.22710 1.54968 0.94567 0.82620 0.79293 0.84129 1.20975 0.98560 0.97251 1.00255 1.20972 0.93277 0.98690 0.96067 1.20550 1.02084 0.98057 0.95177 1.23323 0.91204 1.05798 0.94537 0.87883 0.92613 0.92620 0.86702 0.88573 0.90426 0.88745 0.86855 0.90017 0.89118 0.90443 0.84725 0.86768 0.77265 1.17978 1.18199 0.85315 0.84540 0.84633 0.88241 0.86357 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.47 101.05 1.06 1.05 16 2 O -0.33 -0.16 8.32 -35.23 -0.29 -0.46 16 3 C 0.04 -0.02 0.85 -89.66 -0.08 -0.10 16 4 C 0.44 0.39 2.57 37.16 0.10 0.48 16 5 F -0.18 -0.22 15.27 2.25 0.03 -0.19 16 6 F -0.17 -0.48 17.09 2.25 0.04 -0.44 16 7 F -0.17 -0.14 15.84 2.25 0.04 -0.10 16 8 C -0.14 0.38 6.50 -25.92 -0.17 0.21 16 9 C -0.10 0.24 4.20 -89.81 -0.38 -0.14 16 10 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 11 C 0.08 -0.03 5.06 37.16 0.19 0.16 16 12 O -0.35 -0.19 10.21 -39.27 -0.40 -0.59 16 13 C 0.47 1.05 7.29 36.01 0.26 1.31 16 14 O -0.48 -2.72 16.26 -25.47 -0.41 -3.14 16 15 C 0.10 0.04 2.75 -27.88 -0.08 -0.04 16 16 C -0.18 0.23 9.16 37.16 0.34 0.57 16 17 O -0.29 -0.77 9.34 -39.32 -0.37 -1.14 16 18 C 0.13 0.20 6.60 -39.22 -0.26 -0.06 16 19 C -0.19 -0.06 7.81 -39.43 -0.31 -0.36 16 20 C -0.08 0.03 5.39 -104.64 -0.56 -0.54 16 21 C -0.07 0.07 2.82 36.01 0.10 0.17 16 22 O -0.54 0.36 12.76 -35.23 -0.45 -0.09 16 23 Si 0.69 -1.12 29.79 -169.99 -5.06 -6.18 16 24 C -0.15 0.14 8.67 -39.56 -0.34 -0.20 16 25 C -0.07 0.05 10.04 -39.60 -0.40 -0.34 16 26 C -0.14 -0.11 9.99 -39.43 -0.39 -0.50 16 27 C -0.11 0.21 6.92 -25.78 -0.18 0.03 16 28 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 29 H 0.06 -0.04 6.25 -51.93 -0.32 -0.37 16 30 H 0.06 -0.14 6.69 -51.93 -0.35 -0.49 16 31 H 0.11 -0.42 8.08 -51.93 -0.42 -0.84 16 32 H 0.10 -0.31 6.60 -51.93 -0.34 -0.66 16 33 H 0.08 -0.04 8.13 -51.93 -0.42 -0.46 16 34 H 0.09 0.08 6.08 -51.93 -0.32 -0.24 16 35 H 0.11 -0.16 6.28 -51.93 -0.33 -0.49 16 36 H 0.08 -0.14 6.95 -51.93 -0.36 -0.50 16 37 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 38 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.14 -0.10 5.45 -52.48 -0.29 -0.39 16 40 H 0.11 -0.07 7.96 -51.93 -0.41 -0.49 16 41 H 0.38 -1.65 8.70 45.56 0.40 -1.25 16 42 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 43 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 44 H 0.13 -0.35 4.87 -52.49 -0.26 -0.60 16 45 H 0.14 -0.41 8.06 -52.49 -0.42 -0.83 16 46 H 0.14 0.02 8.06 -52.49 -0.42 -0.40 16 47 H 0.10 -0.14 8.10 -51.93 -0.42 -0.56 16 48 H 0.12 -0.35 7.01 -51.93 -0.36 -0.71 16 LS Contribution 402.01 15.07 6.06 6.06 Total: 0.00 -8.37 402.01 -7.86 -16.22 By element: Atomic # 1 Polarization: -5.72 SS G_CDS: -5.94 Total: -11.66 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: -1.10 Total: 1.69 kcal Atomic # 8 Polarization: -3.48 SS G_CDS: -1.93 Total: -5.41 kcal Atomic # 9 Polarization: -0.84 SS G_CDS: 0.11 Total: -0.73 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.06 Total: -6.18 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -8.37 -7.86 -16.22 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_2302812_17321610.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -260.199 kcal (2) G-P(sol) polarization free energy of solvation -8.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -268.566 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.855 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.222 kcal (6) G-S(sol) free energy of system = (1) + (5) -276.421 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds