Wall clock time and date at job start Sat Mar 6 2021 09:54:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.42902 * 109.47260 * 2 1 4 4 C 1.35905 * 116.99938 * 84.84174 * 3 2 1 5 5 C 1.38705 * 120.05283 * 174.35285 * 4 3 2 6 6 C 1.38174 * 119.94331 * 179.72316 * 5 4 3 7 7 C 1.38247 * 120.05195 * 0.56602 * 6 5 4 8 8 C 1.38286 * 120.11085 * 359.68658 * 7 6 5 9 9 C 1.50697 * 119.97215 * 180.02562 * 8 7 6 10 10 O 1.42904 * 109.47164 * 245.01976 * 9 8 7 11 11 Si 1.86306 * 109.47194 * 5.01864 * 9 8 7 12 12 H 1.48502 * 109.46857 * 300.00443 * 11 9 8 13 13 H 1.48500 * 109.47115 * 59.99785 * 11 9 8 14 14 H 1.48491 * 109.47295 * 180.02562 * 11 9 8 15 15 C 1.38125 * 120.06001 * 0.03877 * 8 7 6 16 16 C 1.50701 * 109.47285 * 239.99820 * 2 1 3 17 17 O 1.20823 * 120.00063 * 120.00055 * 16 2 1 18 18 O 1.34230 * 119.99811 * 300.00528 * 16 2 1 19 19 C 1.45199 * 117.00035 * 180.02562 * 18 16 2 20 20 Si 1.86292 * 109.47285 * 74.99348 * 19 18 16 21 21 C 1.86302 * 109.47358 * 60.00566 * 20 19 18 22 22 C 1.86306 * 109.47189 * 180.02562 * 20 19 18 23 23 C 1.86301 * 109.47328 * 300.00048 * 20 19 18 24 24 H 1.09001 * 109.46660 * 300.00436 * 1 2 3 25 25 H 1.08999 * 109.46610 * 60.00035 * 1 2 3 26 26 H 1.08994 * 109.47016 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.46671 * 119.99486 * 2 1 3 28 28 H 1.07999 * 120.03197 * 359.97438 * 5 4 3 29 29 H 1.07999 * 119.97304 * 180.27320 * 6 5 4 30 30 H 1.07997 * 119.94424 * 179.70430 * 7 6 5 31 31 H 1.09004 * 109.47537 * 125.01903 * 9 8 7 32 32 H 0.96705 * 113.99673 * 179.97438 * 10 9 8 33 33 H 1.07996 * 120.03212 * 180.02562 * 15 8 7 34 34 H 1.08995 * 109.47009 * 195.00100 * 19 18 16 35 35 H 1.09001 * 109.46581 * 314.99357 * 19 18 16 36 36 H 1.08995 * 109.46908 * 59.99265 * 21 20 19 37 37 H 1.08993 * 109.47249 * 180.02562 * 21 20 19 38 38 H 1.08997 * 109.46765 * 299.99956 * 21 20 19 39 39 H 1.09001 * 109.47037 * 59.99789 * 22 20 19 40 40 H 1.08990 * 109.47571 * 180.02562 * 22 20 19 41 41 H 1.09009 * 109.46706 * 300.00356 * 22 20 19 42 42 H 1.09005 * 109.47069 * 60.00235 * 23 20 19 43 43 H 1.09002 * 109.46950 * 179.97438 * 23 20 19 44 44 H 1.08998 * 109.47391 * 299.99909 * 23 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 2.1095 1.9653 1.2060 5 6 2.6739 3.2293 1.2929 6 6 2.7723 3.8579 2.5194 7 6 2.3194 3.2231 3.6610 8 6 1.7611 1.9608 3.5777 9 6 1.2679 1.2720 4.8240 10 8 2.0574 0.1061 5.0680 11 14 1.4112 2.4335 6.2736 12 1 2.8318 2.8266 6.4543 13 1 0.5908 3.6451 6.0200 14 1 0.9258 1.7546 7.5018 15 6 1.6553 1.3305 2.3532 16 6 2.0324 -0.7104 -1.2304 17 8 2.7271 -0.1233 -2.0257 18 8 1.7081 -1.9955 -1.4428 19 6 2.2277 -2.6160 -2.6484 20 14 4.0409 -2.9815 -2.4266 21 6 4.2693 -4.1390 -0.9847 22 6 4.7078 -3.7769 -3.9737 23 6 4.9592 -1.3938 -2.1001 24 1 -0.3633 0.5139 0.8900 25 1 -0.3632 0.5138 -0.8900 26 1 -0.3633 -1.0276 0.0005 27 1 1.8933 -0.5138 0.8901 28 1 3.0325 3.7235 0.4020 29 1 3.2077 4.8439 2.5870 30 1 2.4016 3.7141 4.6194 31 1 0.2252 0.9834 4.6913 32 1 1.7957 -0.3881 5.8570 33 1 1.2188 0.3447 2.2886 34 1 1.6904 -3.5449 -2.8395 35 1 2.0941 -1.9388 -3.4920 36 1 3.7321 -5.0678 -1.1758 37 1 5.3302 -4.3525 -0.8547 38 1 3.8793 -3.6732 -0.0797 39 1 4.5742 -3.0995 -4.8171 40 1 5.7685 -3.9913 -3.8439 41 1 4.1705 -4.7059 -4.1652 42 1 4.5691 -0.9280 -1.1950 43 1 6.0200 -1.6078 -1.9699 44 1 4.8256 -0.7167 -2.9437 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_2302812_4858416.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:54:42 Heat of formation + Delta-G solvation = -154.049917 kcal Electronic energy + Delta-G solvation = -24455.349873 eV Core-core repulsion = 20883.633521 eV Total energy + Delta-G solvation = -3571.716353 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 312.140 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.95744 -41.00344 -39.10134 -37.53162 -37.20448 -33.65227 -32.33711 -31.02364 -29.71981 -28.51100 -28.35410 -28.19351 -26.87512 -25.77463 -23.71173 -22.45411 -21.65228 -19.24420 -18.66733 -18.42475 -18.09646 -17.57232 -17.16602 -16.69036 -16.33170 -15.89425 -15.57675 -15.04700 -14.75551 -14.60114 -14.52754 -14.20244 -14.18167 -14.00159 -13.84309 -13.68713 -13.47641 -13.42070 -13.28320 -13.24860 -13.06200 -13.03495 -12.84626 -12.63232 -12.52871 -12.15504 -12.07262 -11.89848 -11.68447 -11.28613 -10.92040 -10.76557 -10.44793 -10.43461 -9.89710 -9.25022 0.24460 0.37072 1.04835 1.09757 1.11891 1.40130 1.46641 1.49391 1.81289 1.82457 1.86698 2.45892 2.51260 2.64536 3.31238 3.50023 3.62401 3.69987 3.74684 3.89459 4.03546 4.15650 4.22573 4.31307 4.34841 4.47299 4.53449 4.60711 4.65046 4.65440 4.67548 4.71987 4.74269 4.89584 4.91470 4.94347 4.95960 5.22755 5.30801 5.36140 5.41709 5.47988 5.49641 5.68510 5.75034 6.27903 6.49655 6.73794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.094 3.906 3 O -0.287 6.287 4 C 0.129 3.871 5 C -0.140 4.140 6 C -0.072 4.072 7 C -0.158 4.158 8 C -0.035 4.035 9 C -0.085 4.085 10 O -0.544 6.544 11 Si 0.949 3.051 12 H -0.247 1.247 13 H -0.248 1.248 14 H -0.257 1.257 15 C -0.182 4.182 16 C 0.449 3.551 17 O -0.466 6.466 18 O -0.331 6.331 19 C -0.238 4.238 20 Si 0.998 3.002 21 C -0.446 4.446 22 C -0.445 4.445 23 C -0.438 4.438 24 H 0.081 0.919 25 H 0.076 0.924 26 H 0.090 0.910 27 H 0.114 0.886 28 H 0.136 0.864 29 H 0.137 0.863 30 H 0.123 0.877 31 H 0.078 0.922 32 H 0.381 0.619 33 H 0.135 0.865 34 H 0.113 0.887 35 H 0.082 0.918 36 H 0.071 0.929 37 H 0.072 0.928 38 H 0.070 0.930 39 H 0.072 0.928 40 H 0.075 0.925 41 H 0.071 0.929 42 H 0.064 0.936 43 H 0.063 0.937 44 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.451 -2.080 2.488 4.065 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.036 3.964 3 O -0.200 6.200 4 C 0.084 3.916 5 C -0.158 4.158 6 C -0.090 4.090 7 C -0.176 4.176 8 C -0.035 4.035 9 C -0.195 4.195 10 O -0.350 6.350 11 Si 0.772 3.228 12 H -0.170 1.170 13 H -0.172 1.172 14 H -0.181 1.181 15 C -0.201 4.201 16 C 0.289 3.711 17 O -0.352 6.352 18 O -0.247 6.247 19 C -0.357 4.357 20 Si 1.193 2.807 21 C -0.554 4.554 22 C -0.554 4.554 23 C -0.546 4.546 24 H 0.100 0.900 25 H 0.095 0.905 26 H 0.108 0.892 27 H 0.131 0.869 28 H 0.154 0.846 29 H 0.154 0.846 30 H 0.141 0.859 31 H 0.096 0.904 32 H 0.229 0.771 33 H 0.153 0.847 34 H 0.131 0.869 35 H 0.100 0.900 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.089 0.911 39 H 0.091 0.909 40 H 0.094 0.906 41 H 0.090 0.910 42 H 0.083 0.917 43 H 0.082 0.918 44 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -1.873 -1.072 2.164 3.057 hybrid contribution -0.436 -0.627 0.032 0.765 sum -2.309 -1.700 2.196 3.612 Atomic orbital electron populations 1.22357 0.91409 1.04837 1.04759 1.21635 0.96301 0.82757 0.95727 1.86159 1.81370 1.25046 1.27471 1.18982 0.96033 0.92955 0.83606 1.20527 1.02717 0.93485 0.99120 1.20922 0.97331 0.99651 0.91049 1.20952 1.01972 0.95608 0.99104 1.19019 0.97577 0.93744 0.93205 1.24786 0.96873 0.94573 1.03312 1.86510 1.58841 1.39275 1.50349 0.85691 0.81924 0.78915 0.76318 1.17010 1.17204 1.18135 1.21099 1.06025 1.01285 0.91663 1.22986 0.78935 0.81532 0.87618 1.90716 1.33144 1.66152 1.45151 1.86378 1.69794 1.25154 1.43414 1.28407 1.19523 1.00606 0.87127 0.79733 0.64274 0.68218 0.68440 1.26056 1.04907 1.10441 1.13966 1.26029 1.06932 1.07340 1.15077 1.26256 1.07316 1.15290 1.05698 0.90039 0.90528 0.89168 0.86903 0.84592 0.84564 0.85912 0.90436 0.77133 0.84732 0.86910 0.89953 0.91003 0.90889 0.91090 0.90931 0.90591 0.91017 0.91668 0.91776 0.90382 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.18 9.10 37.16 0.34 0.52 16 2 C 0.09 0.10 2.75 -27.88 -0.08 0.02 16 3 O -0.29 -0.93 9.33 -39.39 -0.37 -1.30 16 4 C 0.13 0.32 6.60 -39.22 -0.26 0.07 16 5 C -0.14 -0.26 9.99 -39.43 -0.39 -0.66 16 6 C -0.07 -0.06 10.04 -39.60 -0.40 -0.45 16 7 C -0.16 -0.18 8.67 -39.56 -0.34 -0.53 16 8 C -0.04 -0.05 5.38 -104.65 -0.56 -0.61 16 9 C -0.09 0.06 2.79 36.00 0.10 0.16 16 10 O -0.54 0.18 12.81 -35.23 -0.45 -0.28 16 11 Si 0.95 -0.87 25.14 -169.99 -4.27 -5.14 16 12 H -0.25 -0.13 7.04 56.52 0.40 0.27 16 13 H -0.25 0.08 7.11 56.52 0.40 0.48 16 14 H -0.26 0.21 7.11 56.52 0.40 0.62 16 15 C -0.18 -0.27 7.88 -39.43 -0.31 -0.58 16 16 C 0.45 1.14 6.12 36.01 0.22 1.36 16 17 O -0.47 -2.33 12.18 -25.47 -0.31 -2.64 16 18 O -0.33 -0.38 9.82 -39.26 -0.39 -0.77 16 19 C -0.24 0.08 5.40 101.05 0.55 0.63 16 20 Si 1.00 -1.17 12.12 -169.99 -2.06 -3.23 16 21 C -0.45 0.35 8.65 101.05 0.87 1.23 16 22 C -0.45 0.53 8.65 101.05 0.87 1.41 16 23 C -0.44 -0.77 7.10 101.05 0.72 -0.05 16 24 H 0.08 -0.14 6.90 -51.93 -0.36 -0.50 16 25 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 26 H 0.09 -0.21 8.11 -51.93 -0.42 -0.63 16 27 H 0.11 -0.07 6.32 -51.93 -0.33 -0.40 16 28 H 0.14 0.13 8.06 -52.49 -0.42 -0.29 16 29 H 0.14 -0.22 8.06 -52.49 -0.42 -0.65 16 30 H 0.12 -0.02 4.86 -52.49 -0.25 -0.28 16 31 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 32 H 0.38 -1.81 8.74 45.56 0.40 -1.41 16 33 H 0.14 -0.03 5.43 -52.49 -0.28 -0.31 16 34 H 0.11 -0.28 7.96 -51.93 -0.41 -0.69 16 35 H 0.08 0.01 7.52 -51.93 -0.39 -0.38 16 36 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 37 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 38 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 39 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 40 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 41 H 0.07 -0.13 7.96 -51.92 -0.41 -0.54 16 42 H 0.06 0.21 6.28 -51.93 -0.33 -0.12 16 43 H 0.06 0.07 7.96 -51.93 -0.41 -0.34 16 44 H 0.08 0.23 7.43 -51.93 -0.39 -0.16 16 LS Contribution 359.27 15.07 5.41 5.41 Total: 0.00 -6.98 359.27 -7.25 -14.23 By element: Atomic # 1 Polarization: -2.66 SS G_CDS: -6.14 Total: -8.80 kcal Atomic # 6 Polarization: 1.18 SS G_CDS: 1.33 Total: 2.51 kcal Atomic # 8 Polarization: -3.47 SS G_CDS: -1.51 Total: -4.98 kcal Atomic # 14 Polarization: -2.04 SS G_CDS: -6.33 Total: -8.37 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -6.98 -7.25 -14.23 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_2302812_4858416.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -139.821 kcal (2) G-P(sol) polarization free energy of solvation -6.982 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.803 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.247 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.229 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.050 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds