Wall clock time and date at job start Sat Mar 6 2021 04:38:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86292 * 109.47292 * 2 1 4 4 C 1.50698 * 109.47141 * 120.00195 * 2 1 3 5 5 C 1.38241 * 119.97319 * 245.01735 * 4 2 1 6 6 C 1.38283 * 120.11364 * 179.97438 * 5 4 2 7 7 C 1.38123 * 120.05492 * 359.68420 * 6 5 4 8 8 C 1.38749 * 119.94261 * 0.59449 * 7 6 5 9 9 O 1.35907 * 120.05551 * 179.70113 * 8 7 6 10 10 C 1.42902 * 116.99957 * 359.72469 * 9 8 7 11 11 C 1.52996 * 109.46938 * 180.02562 * 10 9 8 12 12 C 1.50696 * 109.47298 * 180.02562 * 11 10 9 13 13 O 1.20833 * 119.99655 * 359.97438 * 12 11 10 14 14 O 1.34222 * 120.00432 * 180.27351 * 12 11 10 15 15 C 1.45201 * 117.00137 * 179.71953 * 14 12 11 16 16 C 1.53006 * 109.46884 * 179.97438 * 15 14 12 17 17 H 1.09004 * 109.47486 * 304.99771 * 16 15 14 18 18 C 1.53001 * 109.47262 * 65.00334 * 16 15 14 19 19 C 1.53000 * 109.47133 * 179.97438 * 18 16 15 20 20 C 1.52994 * 109.47245 * 299.99797 * 19 18 16 21 21 H 1.08997 * 109.47462 * 300.00131 * 20 19 18 22 22 O 1.42904 * 109.47219 * 179.97438 * 20 19 18 23 23 C 1.53001 * 109.46889 * 60.00054 * 20 19 18 24 24 C 1.52998 * 109.47355 * 299.99511 * 23 20 19 25 25 C 1.38167 * 119.97416 * 65.00218 * 4 2 1 26 26 H 0.96693 * 113.99784 * 60.00142 * 1 2 3 27 27 H 1.09004 * 109.47085 * 240.00201 * 2 1 3 28 28 H 1.48503 * 110.00081 * 60.00141 * 3 2 1 29 29 H 1.48497 * 110.00312 * 181.31790 * 3 2 1 30 30 H 1.07998 * 119.94243 * 359.97438 * 5 4 2 31 31 H 1.08007 * 119.97698 * 179.97438 * 6 5 4 32 32 H 1.08009 * 120.02962 * 180.31955 * 7 6 5 33 33 H 1.08994 * 109.46950 * 60.00216 * 10 9 8 34 34 H 1.09006 * 109.46891 * 299.99999 * 10 9 8 35 35 H 1.09000 * 109.47764 * 59.99713 * 11 10 9 36 36 H 1.09006 * 109.46938 * 299.99491 * 11 10 9 37 37 H 1.08997 * 109.47380 * 299.99656 * 15 14 12 38 38 H 1.08997 * 109.47403 * 60.00337 * 15 14 12 39 39 H 1.09001 * 109.46872 * 300.00305 * 18 16 15 40 40 H 1.08997 * 109.47006 * 59.99929 * 18 16 15 41 41 H 1.08995 * 109.46711 * 179.97438 * 19 18 16 42 42 H 1.08997 * 109.46998 * 60.00212 * 19 18 16 43 43 H 0.96701 * 113.99547 * 60.00108 * 22 20 19 44 44 H 1.09007 * 109.47061 * 179.97438 * 23 20 19 45 45 H 1.09004 * 109.47329 * 60.00385 * 23 20 19 46 46 H 1.08996 * 109.47756 * 300.00380 * 24 23 20 47 47 H 1.09004 * 109.47211 * 179.97438 * 24 23 20 48 48 H 1.07999 * 120.02421 * 0.03745 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6385 -0.0117 2.1911 6 6 3.1003 -0.6606 3.3215 7 6 2.8504 -2.0077 3.4965 8 6 2.1460 -2.7126 2.5311 9 8 1.9041 -4.0395 2.6981 10 6 2.4096 -4.6462 3.8891 11 6 2.0424 -6.1314 3.9002 12 6 2.5748 -6.7711 5.1564 13 8 3.1858 -6.1073 5.9602 14 8 2.3756 -8.0796 5.3797 15 6 2.9219 -8.6295 6.6075 16 6 2.5964 -10.1225 6.6867 17 1 1.5204 -10.2655 6.5874 18 6 3.3157 -10.8620 5.5568 19 6 2.9906 -12.3550 5.6365 20 6 3.4566 -12.9071 6.9850 21 1 4.5326 -12.7638 7.0842 22 8 3.1525 -14.3014 7.0596 23 6 2.7374 -12.1676 8.1149 24 6 3.0625 -10.6747 8.0354 25 6 1.6847 -2.0596 1.3976 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5138 -0.8900 28 1 1.5616 2.4678 1.2085 29 1 3.5347 1.7702 -0.0321 30 1 2.8305 1.0428 2.0585 31 1 3.6529 -0.1126 4.0705 32 1 3.2069 -2.5130 4.3821 33 1 1.9727 -4.1570 4.7596 34 1 3.4941 -4.5401 3.9188 35 1 2.4795 -6.6204 3.0296 36 1 0.9579 -6.2378 3.8703 37 1 4.0031 -8.4921 6.6177 38 1 2.4823 -8.1164 7.4627 39 1 2.9840 -10.4682 4.5960 40 1 4.3916 -10.7190 5.6562 41 1 3.5027 -12.8817 4.8312 42 1 1.9147 -12.4983 5.5373 43 1 3.5755 -14.8336 6.3719 44 1 3.0691 -12.5613 9.0758 45 1 1.6614 -12.3110 8.0159 46 1 4.1384 -10.5312 8.1345 47 1 2.5497 -10.1478 8.8401 48 1 1.1325 -2.6051 0.6467 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_2303654_16737258.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 04:38:45 Heat of formation + Delta-G solvation = -192.961008 kcal Electronic energy + Delta-G solvation = -28024.699381 eV Core-core repulsion = 23817.981249 eV Total energy + Delta-G solvation = -4206.718132 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.170 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.78093 -41.20839 -40.15845 -39.13481 -37.89721 -37.31191 -36.60807 -33.66268 -32.59677 -31.98511 -31.94256 -30.89953 -27.40590 -26.78685 -25.37215 -23.92595 -23.69960 -22.54451 -22.11165 -21.56515 -20.95783 -19.29463 -18.51891 -18.41841 -18.23846 -18.02518 -17.56414 -17.15780 -17.09144 -17.01634 -16.45926 -15.82724 -15.60450 -15.45823 -15.36158 -14.95022 -14.65316 -14.55084 -14.45698 -14.20991 -14.14515 -13.87790 -13.65032 -13.44644 -13.33594 -13.18485 -13.05419 -12.87870 -12.61692 -12.28616 -12.24606 -12.09307 -11.99688 -11.90700 -11.79571 -11.74461 -11.66619 -11.53650 -11.20658 -10.78955 -10.38616 -9.90233 -9.27049 -4.97732 0.20055 0.38846 1.04742 1.18353 1.28987 1.64003 1.97027 2.28523 2.63104 3.08195 3.32666 3.37384 3.49715 3.53972 3.63214 3.68691 3.74888 3.82057 3.84884 3.95598 3.98227 4.05284 4.13250 4.17903 4.19324 4.22757 4.23660 4.28771 4.34783 4.37216 4.41868 4.44672 4.49802 4.53865 4.65673 4.67754 4.83246 4.94097 4.95868 4.96459 5.04741 5.04928 5.19919 5.22448 5.26775 5.34513 5.36586 5.43639 5.64166 6.31161 6.58370 6.60489 6.65538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.073 4.073 3 Si 0.687 3.313 4 C -0.037 4.037 5 C -0.160 4.160 6 C -0.072 4.072 7 C -0.202 4.202 8 C 0.133 3.867 9 O -0.312 6.312 10 C 0.070 3.930 11 C -0.115 4.115 12 C 0.471 3.529 13 O -0.507 6.507 14 O -0.351 6.351 15 C 0.071 3.929 16 C -0.090 4.090 17 H 0.087 0.913 18 C -0.112 4.112 19 C -0.152 4.152 20 C 0.102 3.898 21 H 0.055 0.945 22 O -0.569 6.569 23 C -0.111 4.111 24 C -0.111 4.111 25 C -0.120 4.120 26 H 0.383 0.617 27 H 0.077 0.923 28 H -0.250 1.250 29 H -0.255 1.255 30 H 0.120 0.880 31 H 0.131 0.869 32 H 0.134 0.866 33 H 0.075 0.925 34 H 0.075 0.925 35 H 0.120 0.880 36 H 0.120 0.880 37 H 0.074 0.926 38 H 0.074 0.926 39 H 0.075 0.925 40 H 0.064 0.936 41 H 0.067 0.933 42 H 0.073 0.927 43 H 0.379 0.621 44 H 0.074 0.926 45 H 0.072 0.928 46 H 0.070 0.930 47 H 0.075 0.925 48 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.487 -0.046 -3.695 3.727 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.184 4.184 3 Si 0.588 3.412 4 C -0.037 4.037 5 C -0.178 4.178 6 C -0.090 4.090 7 C -0.221 4.221 8 C 0.088 3.912 9 O -0.226 6.226 10 C -0.005 4.005 11 C -0.152 4.152 12 C 0.313 3.687 13 O -0.395 6.395 14 O -0.268 6.268 15 C -0.002 4.002 16 C -0.108 4.108 17 H 0.105 0.895 18 C -0.150 4.150 19 C -0.190 4.190 20 C 0.044 3.956 21 H 0.073 0.927 22 O -0.375 6.375 23 C -0.149 4.149 24 C -0.148 4.148 25 C -0.139 4.139 26 H 0.231 0.769 27 H 0.095 0.905 28 H -0.175 1.175 29 H -0.179 1.179 30 H 0.138 0.862 31 H 0.149 0.851 32 H 0.152 0.848 33 H 0.093 0.907 34 H 0.093 0.907 35 H 0.138 0.862 36 H 0.139 0.861 37 H 0.092 0.908 38 H 0.093 0.907 39 H 0.093 0.907 40 H 0.083 0.917 41 H 0.086 0.914 42 H 0.091 0.909 43 H 0.226 0.774 44 H 0.093 0.907 45 H 0.091 0.909 46 H 0.088 0.912 47 H 0.094 0.906 48 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.805 0.460 -2.042 2.242 hybrid contribution 0.633 -0.668 0.042 0.921 sum 1.438 -0.208 -1.999 2.472 Atomic orbital electron populations 1.86503 1.17008 1.81848 1.49701 1.24723 0.85890 1.10520 0.97237 0.95357 0.80734 0.77852 0.87233 1.19115 0.96921 0.92999 0.94706 1.20822 1.02411 0.99192 0.95375 1.20878 0.97571 0.93799 0.96724 1.21364 1.04344 0.95841 1.00523 1.18907 0.95242 0.82488 0.94542 1.85965 1.74459 1.20330 1.41844 1.22442 0.99886 0.91512 0.86689 1.21085 1.05112 0.94087 0.94965 1.23192 0.77024 0.80807 0.87646 1.90723 1.38277 1.63569 1.46963 1.86461 1.72136 1.24997 1.43169 1.23219 0.99157 0.93826 0.84030 1.21287 1.02142 0.91276 0.96091 0.89490 1.21535 1.00349 0.94276 0.98829 1.22275 1.02747 0.96282 0.97686 1.21847 0.98015 0.81085 0.94690 0.92703 1.86523 1.75525 1.18502 1.56925 1.21441 1.01487 0.93570 0.98381 1.21479 1.02041 0.95267 0.96026 1.20224 1.02736 0.93593 0.97338 0.76932 0.90542 1.17512 1.17945 0.86233 0.85130 0.84829 0.90669 0.90696 0.86177 0.86149 0.90800 0.90730 0.90676 0.91712 0.91450 0.90859 0.77365 0.90742 0.90878 0.91168 0.90642 0.84559 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.32 12.81 -35.23 -0.45 -0.77 16 2 C -0.07 -0.03 2.79 36.00 0.10 0.07 16 3 Si 0.69 -0.55 29.85 -169.99 -5.07 -5.63 16 4 C -0.04 -0.11 5.38 -104.65 -0.56 -0.67 16 5 C -0.16 -0.48 8.67 -39.56 -0.34 -0.82 16 6 C -0.07 -0.16 10.04 -39.61 -0.40 -0.56 16 7 C -0.20 -0.47 9.04 -39.43 -0.36 -0.82 16 8 C 0.13 0.41 6.69 -39.22 -0.26 0.15 16 9 O -0.31 -0.68 10.14 -19.45 -0.20 -0.87 16 10 C 0.07 0.02 4.03 37.16 0.15 0.17 16 11 C -0.12 0.16 6.18 -27.89 -0.17 -0.02 16 12 C 0.47 0.40 7.96 36.00 0.29 0.69 16 13 O -0.51 -1.85 15.73 -18.76 -0.30 -2.14 16 14 O -0.35 -0.15 9.76 -39.24 -0.38 -0.53 16 15 C 0.07 -0.03 4.84 37.16 0.18 0.15 16 16 C -0.09 0.13 2.44 -90.61 -0.22 -0.09 16 17 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 18 C -0.11 0.17 5.10 -26.73 -0.14 0.03 16 19 C -0.15 0.20 5.54 -26.73 -0.15 0.05 16 20 C 0.10 -0.05 3.47 -26.73 -0.09 -0.15 16 21 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 22 O -0.57 -0.48 13.32 -35.23 -0.47 -0.95 16 23 C -0.11 0.06 5.57 -26.73 -0.15 -0.08 16 24 C -0.11 0.20 5.20 -26.73 -0.14 0.06 16 25 C -0.12 -0.39 9.62 -39.43 -0.38 -0.77 16 26 H 0.38 -1.77 8.74 45.56 0.40 -1.37 16 27 H 0.08 -0.11 7.96 -51.93 -0.41 -0.52 16 28 H -0.25 -0.59 7.05 56.52 0.40 -0.20 16 29 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 30 H 0.12 0.27 4.86 -52.49 -0.26 0.02 16 31 H 0.13 0.00 8.06 -52.48 -0.42 -0.42 16 32 H 0.13 0.10 6.30 -52.48 -0.33 -0.23 16 33 H 0.08 0.03 7.61 -51.93 -0.40 -0.36 16 34 H 0.07 0.01 7.63 -51.93 -0.40 -0.38 16 35 H 0.12 -0.33 8.14 -51.93 -0.42 -0.76 16 36 H 0.12 -0.31 8.14 -51.93 -0.42 -0.73 16 37 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16 38 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16 39 H 0.07 -0.08 7.82 -51.93 -0.41 -0.49 16 40 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 42 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 43 H 0.38 -1.13 9.08 45.56 0.41 -0.72 16 44 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 45 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 46 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 47 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 48 H 0.14 0.32 8.06 -52.49 -0.42 -0.10 16 LS Contribution 390.28 15.07 5.88 5.88 Total: 0.00 -8.81 390.28 -10.56 -19.37 By element: Atomic # 1 Polarization: -4.82 SS G_CDS: -6.93 Total: -11.74 kcal Atomic # 6 Polarization: 0.03 SS G_CDS: -2.64 Total: -2.61 kcal Atomic # 8 Polarization: -3.47 SS G_CDS: -1.80 Total: -5.27 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: -5.07 Total: -5.63 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -8.81 -10.56 -19.37 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_2303654_16737258.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -173.590 kcal (2) G-P(sol) polarization free energy of solvation -8.812 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.403 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.558 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.371 kcal (6) G-S(sol) free energy of system = (1) + (5) -192.961 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds