Wall clock time and date at job start Sat Mar 6 2021 05:02:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42897 * 113.99840 * 2 1 4 4 C 1.53001 * 112.91354 * 68.10986 * 3 2 1 5 5 F 1.39895 * 109.46634 * 283.76718 * 4 3 2 6 6 F 1.39902 * 109.46948 * 43.76005 * 4 3 2 7 7 F 1.39889 * 109.47487 * 163.76682 * 4 3 2 8 8 C 1.53776 * 113.61491 * 296.85204 * 3 2 1 9 9 C 1.53785 * 87.08469 * 270.88916 * 8 3 2 10 10 H 1.09002 * 113.61481 * 220.01861 * 9 8 3 11 11 C 1.52997 * 113.61291 * 89.19933 * 9 8 3 12 12 O 1.45199 * 109.47078 * 176.53260 * 11 9 8 13 13 C 1.34226 * 117.00432 * 179.97438 * 12 11 9 14 14 O 1.20823 * 119.99970 * 0.02562 * 13 12 11 15 15 C 1.50696 * 120.00354 * 179.97438 * 13 12 11 16 16 C 1.52998 * 109.47618 * 180.02562 * 15 13 12 17 17 O 1.42892 * 109.47783 * 180.02562 * 16 15 13 18 18 C 1.35901 * 117.00466 * 179.97438 * 17 16 15 19 19 C 1.38712 * 120.05703 * 179.72792 * 18 17 16 20 20 C 1.38167 * 119.94228 * 179.76933 * 19 18 17 21 21 C 1.50701 * 119.97284 * 180.22990 * 20 19 18 22 22 O 1.42902 * 109.46954 * 300.25615 * 21 20 19 23 23 Si 1.86297 * 109.47305 * 180.25386 * 21 20 19 24 24 C 1.38245 * 120.05448 * 0.48654 * 20 19 18 25 25 C 1.38285 * 120.11377 * 359.76820 * 24 20 19 26 26 C 1.38129 * 120.05468 * 0.02562 * 25 24 20 27 27 C 1.53786 * 87.07795 * 334.56603 * 9 8 3 28 28 H 1.08999 * 109.47209 * 179.24188 * 1 2 3 29 29 H 1.09007 * 109.47036 * 299.23763 * 1 2 3 30 30 H 1.08995 * 109.47431 * 59.23722 * 1 2 3 31 31 H 1.09001 * 113.61596 * 156.33650 * 8 3 2 32 32 H 1.09002 * 113.68846 * 25.44708 * 8 3 2 33 33 H 1.09005 * 109.47378 * 296.52688 * 11 9 8 34 34 H 1.08998 * 109.47640 * 56.53483 * 11 9 8 35 35 H 1.08995 * 109.47818 * 300.00604 * 15 13 12 36 36 H 1.09008 * 109.47030 * 60.00510 * 15 13 12 37 37 H 1.09004 * 109.47363 * 300.00698 * 16 15 13 38 38 H 1.09008 * 109.46616 * 60.00119 * 16 15 13 39 39 H 1.08005 * 120.02864 * 359.97438 * 19 18 17 40 40 H 1.08999 * 109.46895 * 60.25245 * 21 20 19 41 41 H 0.96700 * 114.00302 * 299.99482 * 22 21 20 42 42 H 1.48494 * 110.00016 * 180.02562 * 23 21 20 43 43 H 1.48495 * 110.00060 * 301.32297 * 23 21 20 44 44 H 1.07999 * 119.94342 * 179.74264 * 24 20 19 45 45 H 1.08003 * 119.97436 * 179.97438 * 25 24 20 46 46 H 1.07997 * 120.02798 * 180.02562 * 26 25 24 47 47 H 1.09001 * 113.60879 * 139.98357 * 27 9 8 48 48 H 1.08992 * 113.61272 * 270.88376 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7725 2.0633 1.3077 5 9 0.4548 2.5321 1.3419 6 9 1.9901 1.2046 2.3905 7 9 2.6548 3.1460 1.3863 8 6 1.6793 2.1270 -1.2571 9 6 2.9350 1.5098 -1.8953 10 1 3.5121 2.2148 -2.4937 11 6 2.6671 0.1916 -2.6243 12 8 3.8896 -0.2675 -3.2591 13 6 3.8247 -1.4197 -3.9446 14 8 2.7809 -2.0244 -4.0124 15 6 5.0535 -1.9585 -4.6307 16 6 4.7097 -3.2725 -5.3349 17 8 5.8749 -3.7838 -5.9850 18 6 5.7404 -4.9547 -6.6616 19 6 6.8297 -5.5054 -7.3206 20 6 6.6915 -6.6983 -8.0039 21 6 7.8758 -7.2998 -8.7157 22 8 8.3534 -6.3840 -9.7033 23 14 7.3631 -8.8901 -9.5397 24 6 5.4664 -7.3379 -8.0394 25 6 4.3776 -6.7882 -7.3877 26 6 4.5117 -5.5980 -6.6997 27 6 3.4753 1.3274 -0.4671 28 1 -0.3633 -1.0276 -0.0136 29 1 -0.3633 0.5020 0.8968 30 1 -0.3634 0.5256 -0.8830 31 1 1.7507 3.2042 -1.1060 32 1 0.7506 1.8285 -1.7435 33 1 2.3262 -0.5566 -1.9086 34 1 1.8995 0.3453 -3.3827 35 1 5.4066 -1.2347 -5.3651 36 1 5.8343 -2.1359 -3.8910 37 1 4.3564 -3.9967 -4.6008 38 1 3.9290 -3.0948 -6.0747 39 1 7.7859 -5.0037 -7.2969 40 1 8.6680 -7.5029 -7.9952 41 1 7.6995 -6.1575 -10.3787 42 1 8.5223 -9.4935 -10.2447 43 1 6.8347 -9.8393 -8.5273 44 1 5.3594 -8.2681 -8.5775 45 1 3.4215 -7.2896 -7.4173 46 1 3.6612 -5.1694 -6.1905 47 1 3.9964 0.3822 -0.3148 48 1 4.0377 2.1859 -0.1001 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_2303654_17321610.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:02:18 Heat of formation + Delta-G solvation = -285.616129 kcal Electronic energy + Delta-G solvation = -36089.135679 eV Core-core repulsion = 30470.037793 eV Total energy + Delta-G solvation = -5619.097886 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.142 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -51.20266 -48.75191 -48.63255 -42.00452 -41.39954 -41.04169 -39.20900 -37.91911 -37.26956 -36.98231 -33.64026 -32.45317 -31.13446 -30.62678 -28.43732 -27.66988 -27.00459 -26.92290 -25.56285 -23.67908 -23.44366 -22.35935 -21.62469 -20.76159 -19.85195 -19.50891 -19.42433 -19.27986 -18.58962 -18.02882 -17.92861 -17.41109 -17.29840 -17.08160 -16.93845 -16.86413 -16.59348 -16.11433 -15.90182 -15.68474 -15.54511 -15.43684 -15.30758 -15.09569 -15.00031 -14.90638 -14.80699 -14.78819 -14.48751 -14.32789 -14.19081 -14.12165 -13.78545 -13.48566 -13.30059 -13.29650 -13.01924 -12.90546 -12.85919 -12.49858 -12.41268 -12.20668 -11.94677 -11.90179 -11.85225 -11.74846 -11.62653 -11.61719 -10.90931 -10.50472 -9.90494 -9.25993 -5.03057 0.21424 0.40582 1.04634 1.15211 1.29773 1.50956 1.63836 1.93903 1.96365 2.25559 2.48766 2.57884 2.68013 2.77798 3.11155 3.23916 3.34238 3.40461 3.47139 3.54896 3.64180 3.68706 3.79231 3.86577 4.01365 4.02410 4.07463 4.11307 4.16941 4.19339 4.20986 4.27577 4.29886 4.32782 4.42617 4.44462 4.48839 4.50245 4.55908 4.60234 4.63825 4.65907 4.81486 4.97494 5.25285 5.29637 5.37709 5.44371 5.56033 5.66995 6.32404 6.56524 6.57440 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.037 3.963 4 C 0.438 3.562 5 F -0.182 7.182 6 F -0.174 7.174 7 F -0.174 7.174 8 C -0.143 4.143 9 C -0.101 4.101 10 H 0.108 0.892 11 C 0.077 3.923 12 O -0.351 6.351 13 C 0.472 3.528 14 O -0.506 6.506 15 C -0.115 4.115 16 C 0.071 3.929 17 O -0.313 6.313 18 C 0.132 3.868 19 C -0.124 4.124 20 C -0.082 4.082 21 C -0.069 4.069 22 O -0.539 6.539 23 Si 0.693 3.307 24 C -0.155 4.155 25 C -0.073 4.073 26 C -0.203 4.203 27 C -0.112 4.112 28 H 0.103 0.897 29 H 0.055 0.945 30 H 0.055 0.945 31 H 0.114 0.886 32 H 0.096 0.904 33 H 0.093 0.907 34 H 0.077 0.923 35 H 0.120 0.880 36 H 0.120 0.880 37 H 0.075 0.925 38 H 0.075 0.925 39 H 0.135 0.865 40 H 0.116 0.884 41 H 0.380 0.620 42 H -0.255 1.255 43 H -0.258 1.258 44 H 0.129 0.871 45 H 0.131 0.869 46 H 0.132 0.868 47 H 0.099 0.901 48 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.427 1.635 -2.933 4.143 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.250 6.250 3 C -0.005 4.005 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.181 4.181 9 C -0.119 4.119 10 H 0.127 0.873 11 C 0.004 3.996 12 O -0.268 6.268 13 C 0.315 3.685 14 O -0.393 6.393 15 C -0.153 4.153 16 C -0.005 4.005 17 O -0.227 6.227 18 C 0.087 3.913 19 C -0.143 4.143 20 C -0.082 4.082 21 C -0.180 4.180 22 O -0.344 6.344 23 Si 0.595 3.405 24 C -0.172 4.172 25 C -0.091 4.091 26 C -0.221 4.221 27 C -0.149 4.149 28 H 0.121 0.879 29 H 0.073 0.927 30 H 0.074 0.926 31 H 0.133 0.867 32 H 0.114 0.886 33 H 0.112 0.888 34 H 0.095 0.905 35 H 0.139 0.861 36 H 0.138 0.862 37 H 0.093 0.907 38 H 0.093 0.907 39 H 0.153 0.847 40 H 0.133 0.867 41 H 0.227 0.773 42 H -0.180 1.180 43 H -0.183 1.183 44 H 0.146 0.854 45 H 0.149 0.851 46 H 0.150 0.850 47 H 0.117 0.883 48 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -1.839 0.533 -2.556 3.194 hybrid contribution -0.615 0.654 1.114 1.431 sum -2.454 1.187 -1.442 3.084 Atomic orbital electron populations 1.23159 0.79347 1.04516 1.01564 1.88092 1.21288 1.21836 1.93801 1.24045 1.00285 0.86536 0.89665 1.21148 0.74132 0.78468 0.87936 1.93190 1.36749 1.89423 1.96933 1.93224 1.94358 1.69782 1.58125 1.93178 1.68881 1.56872 1.96661 1.23600 0.99730 1.01111 0.93613 1.22118 0.97625 0.96518 0.95651 0.87345 1.23039 0.84138 0.95694 0.96720 1.86427 1.39561 1.38642 1.62131 1.23171 0.90181 0.78806 0.76384 1.90721 1.31992 1.58257 1.58357 1.21086 0.95150 0.97404 1.01612 1.22433 0.86834 0.94388 0.96821 1.85965 1.36190 1.35827 1.64725 1.18944 0.94056 0.85551 0.92796 1.20243 0.98163 0.96406 0.99447 1.20142 0.95199 0.94949 0.97954 1.25108 0.96897 1.02395 0.93615 1.86511 1.42176 1.65642 1.40074 0.94608 0.84793 0.75523 0.85583 1.20943 0.92706 1.00785 1.02789 1.20931 0.98766 0.94382 0.95016 1.21382 0.96980 0.98502 1.05267 1.23274 0.91232 1.05813 0.94590 0.87894 0.92680 0.92604 0.86735 0.88598 0.88845 0.90509 0.86141 0.86155 0.90710 0.90661 0.84716 0.86708 0.77301 1.17973 1.18294 0.85411 0.85124 0.85015 0.88267 0.86367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.42 101.05 1.05 1.04 16 2 O -0.33 -0.06 8.34 -35.23 -0.29 -0.35 16 3 C 0.04 -0.03 0.84 -89.81 -0.08 -0.11 16 4 C 0.44 0.33 2.57 37.16 0.10 0.42 16 5 F -0.18 -0.20 15.35 2.25 0.03 -0.16 16 6 F -0.17 -0.46 17.10 2.25 0.04 -0.42 16 7 F -0.17 -0.12 15.81 2.25 0.04 -0.09 16 8 C -0.14 0.41 6.50 -25.92 -0.17 0.25 16 9 C -0.10 0.26 4.20 -89.80 -0.38 -0.11 16 10 H 0.11 -0.38 8.14 -51.93 -0.42 -0.81 16 11 C 0.08 -0.07 5.07 37.16 0.19 0.11 16 12 O -0.35 0.06 10.22 -39.25 -0.40 -0.34 16 13 C 0.47 0.12 7.96 36.00 0.29 0.41 16 14 O -0.51 -1.50 15.73 -18.75 -0.29 -1.79 16 15 C -0.12 0.23 6.18 -27.89 -0.17 0.06 16 16 C 0.07 -0.04 4.03 37.16 0.15 0.11 16 17 O -0.31 -0.40 10.14 -19.43 -0.20 -0.59 16 18 C 0.13 0.22 6.69 -39.22 -0.26 -0.04 16 19 C -0.12 -0.20 9.55 -39.43 -0.38 -0.58 16 20 C -0.08 -0.05 5.39 -104.64 -0.56 -0.61 16 21 C -0.07 0.00 2.82 36.01 0.10 0.10 16 22 O -0.54 -0.21 12.76 -35.23 -0.45 -0.66 16 23 Si 0.69 -0.70 29.79 -169.99 -5.06 -5.77 16 24 C -0.15 0.03 8.67 -39.56 -0.34 -0.32 16 25 C -0.07 0.01 10.04 -39.60 -0.40 -0.39 16 26 C -0.20 -0.13 9.04 -39.43 -0.36 -0.49 16 27 C -0.11 0.22 6.90 -25.91 -0.18 0.04 16 28 H 0.10 -0.25 8.14 -51.93 -0.42 -0.68 16 29 H 0.05 -0.06 6.48 -51.93 -0.34 -0.39 16 30 H 0.06 -0.16 6.55 -51.93 -0.34 -0.50 16 31 H 0.11 -0.44 8.05 -51.93 -0.42 -0.86 16 32 H 0.10 -0.34 6.54 -51.93 -0.34 -0.68 16 33 H 0.09 0.02 6.09 -51.93 -0.32 -0.30 16 34 H 0.08 -0.09 8.13 -51.93 -0.42 -0.52 16 35 H 0.12 -0.41 8.14 -51.93 -0.42 -0.83 16 36 H 0.12 -0.38 8.14 -51.92 -0.42 -0.80 16 37 H 0.07 -0.03 7.62 -51.93 -0.40 -0.43 16 38 H 0.08 -0.05 7.62 -51.92 -0.40 -0.45 16 39 H 0.13 0.22 8.06 -52.48 -0.42 -0.20 16 40 H 0.12 0.04 7.96 -51.93 -0.41 -0.37 16 41 H 0.38 -1.32 8.70 45.56 0.40 -0.92 16 42 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 43 H -0.26 -0.34 7.11 56.52 0.40 0.07 16 44 H 0.13 -0.26 4.87 -52.49 -0.26 -0.51 16 45 H 0.13 -0.29 8.06 -52.48 -0.42 -0.71 16 46 H 0.13 -0.07 6.30 -52.49 -0.33 -0.40 16 47 H 0.10 -0.14 8.10 -51.93 -0.42 -0.56 16 48 H 0.12 -0.35 7.01 -51.93 -0.36 -0.71 16 LS Contribution 405.04 15.07 6.10 6.10 Total: 0.00 -7.93 405.04 -7.97 -15.90 By element: Atomic # 1 Polarization: -5.62 SS G_CDS: -6.09 Total: -11.71 kcal Atomic # 6 Polarization: 1.28 SS G_CDS: -1.40 Total: -0.12 kcal Atomic # 8 Polarization: -2.11 SS G_CDS: -1.64 Total: -3.75 kcal Atomic # 9 Polarization: -0.78 SS G_CDS: 0.11 Total: -0.67 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.06 Total: -5.77 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -7.93 -7.97 -15.90 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_2303654_17321610.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -269.717 kcal (2) G-P(sol) polarization free energy of solvation -7.927 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -277.644 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.972 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.899 kcal (6) G-S(sol) free energy of system = (1) + (5) -285.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds