Wall clock time and date at job start Sat Mar 6 2021 05:18:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86297 * 109.47401 * 2 1 4 4 C 1.50704 * 109.47449 * 119.99983 * 2 1 3 5 5 C 1.38244 * 119.97303 * 245.02338 * 4 2 1 6 6 C 1.38284 * 120.10940 * 179.97438 * 5 4 2 7 7 C 1.38127 * 120.05804 * 359.76476 * 6 5 4 8 8 C 1.38755 * 119.94088 * 0.51001 * 7 6 5 9 9 O 1.35896 * 120.05387 * 179.74765 * 8 7 6 10 10 C 1.42898 * 117.00202 * 359.71815 * 9 8 7 11 11 C 1.53007 * 109.47455 * 180.02562 * 10 9 8 12 12 C 1.52996 * 109.46995 * 180.02562 * 11 10 9 13 13 C 1.50696 * 109.46926 * 180.02562 * 12 11 10 14 14 O 1.20833 * 120.00074 * 359.97438 * 13 12 11 15 15 O 1.34232 * 120.00384 * 179.97438 * 13 12 11 16 16 C 1.45199 * 117.00308 * 179.97438 * 15 13 12 17 17 C 1.53002 * 109.47231 * 179.97438 * 16 15 13 18 18 H 1.09002 * 109.47067 * 305.00121 * 17 16 15 19 19 C 1.53005 * 109.46982 * 64.99773 * 17 16 15 20 20 C 1.52999 * 109.47159 * 179.97438 * 19 17 16 21 21 C 1.52997 * 109.47317 * 300.00546 * 20 19 17 22 22 H 1.09002 * 109.47153 * 299.99641 * 21 20 19 23 23 O 1.42896 * 109.46906 * 179.97438 * 21 20 19 24 24 C 1.53000 * 109.47060 * 59.99960 * 21 20 19 25 25 C 1.52997 * 109.47143 * 185.00104 * 17 16 15 26 26 C 1.38165 * 119.96850 * 64.99774 * 4 2 1 27 27 H 0.96696 * 113.99923 * 299.99912 * 1 2 3 28 28 H 1.09003 * 109.47199 * 240.00073 * 2 1 3 29 29 H 1.48496 * 110.00402 * 178.68245 * 3 2 1 30 30 H 1.48500 * 109.99845 * 300.00292 * 3 2 1 31 31 H 1.08002 * 119.94269 * 359.97438 * 5 4 2 32 32 H 1.08003 * 119.97370 * 180.02562 * 6 5 4 33 33 H 1.07999 * 120.02856 * 180.27793 * 7 6 5 34 34 H 1.09001 * 109.46858 * 60.00655 * 10 9 8 35 35 H 1.09001 * 109.47725 * 300.00804 * 10 9 8 36 36 H 1.09001 * 109.46796 * 60.00319 * 11 10 9 37 37 H 1.08991 * 109.46614 * 300.00564 * 11 10 9 38 38 H 1.09001 * 109.47471 * 60.00263 * 12 11 10 39 39 H 1.09001 * 109.47048 * 300.00166 * 12 11 10 40 40 H 1.09000 * 109.46906 * 59.99830 * 16 15 13 41 41 H 1.09000 * 109.47159 * 299.99874 * 16 15 13 42 42 H 1.09000 * 109.47360 * 300.00293 * 19 17 16 43 43 H 1.09002 * 109.46935 * 60.00267 * 19 17 16 44 44 H 1.08996 * 109.46929 * 179.97438 * 20 19 17 45 45 H 1.09002 * 109.46716 * 60.00455 * 20 19 17 46 46 H 0.96699 * 114.00604 * 59.99725 * 23 21 20 47 47 H 1.08992 * 109.47399 * 59.99823 * 24 21 20 48 48 H 1.09004 * 109.46724 * 180.02562 * 24 21 20 49 49 H 1.08993 * 109.47194 * 59.99677 * 25 17 16 50 50 H 1.09002 * 109.46695 * 299.99691 * 25 17 16 51 51 H 1.07999 * 120.03513 * 0.04606 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6384 -0.0116 2.1912 6 6 3.1002 -0.6605 3.3216 7 6 2.8519 -2.0080 3.4958 8 6 2.1475 -2.7129 2.5303 9 8 1.9063 -4.0399 2.6969 10 6 2.4126 -4.6468 3.8874 11 6 2.0462 -6.1323 3.8982 12 6 2.5877 -6.7819 5.1732 13 6 2.2273 -8.2451 5.1835 14 8 1.6011 -8.7196 4.2655 15 8 2.6019 -9.0214 6.2125 16 6 2.2197 -10.4211 6.1557 17 6 2.7313 -11.1406 7.4053 18 1 3.8064 -10.9871 7.4984 19 6 2.0270 -10.5784 8.6418 20 6 2.5381 -11.2984 9.8913 21 6 2.2445 -12.7953 9.7735 22 1 1.1693 -12.9484 9.6803 23 8 2.7224 -13.4677 10.9403 24 6 2.9489 -13.3573 8.5370 25 6 2.4381 -12.6376 7.2878 26 6 1.6845 -2.0595 1.3977 27 1 -0.3933 0.4417 0.7650 28 1 1.7923 -0.5138 -0.8900 29 1 3.5346 1.7703 0.0321 30 1 1.5615 2.4678 -1.2085 31 1 2.8303 1.0430 2.0586 32 1 3.6520 -0.1123 4.0709 33 1 3.2090 -2.5134 4.3809 34 1 1.9758 -4.1582 4.7584 35 1 3.4970 -4.5402 3.9169 36 1 2.4833 -6.6207 3.0273 37 1 0.9619 -6.2392 3.8686 38 1 2.1503 -6.2935 6.0439 39 1 3.6720 -6.6749 5.2031 40 1 2.6548 -10.8808 5.2684 41 1 1.1335 -10.4995 6.1100 42 1 2.2358 -9.5119 8.7255 43 1 0.9519 -10.7319 8.5488 44 1 2.0367 -10.8976 10.7722 45 1 3.6133 -11.1452 9.9846 46 1 2.3186 -13.1617 11.7639 47 1 4.0240 -13.2042 8.6303 48 1 2.7393 -14.4237 8.4529 49 1 2.9398 -13.0380 6.4069 50 1 1.3630 -12.7910 7.1948 51 1 1.1325 -2.6052 0.6468 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_2308196_16737258.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 05:18:23 Heat of formation + Delta-G solvation = -202.502014 kcal Electronic energy + Delta-G solvation = -29549.973219 eV Core-core repulsion = 25187.303738 eV Total energy + Delta-G solvation = -4362.669480 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.186 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.64783 -41.25692 -40.14977 -39.22999 -37.90995 -37.28312 -36.58986 -35.13471 -32.47648 -32.06671 -31.93963 -31.27297 -28.89199 -26.96709 -26.46313 -24.08595 -23.82727 -23.61669 -22.37944 -21.95879 -21.62016 -20.94576 -19.21482 -18.69910 -18.24647 -17.95412 -17.81314 -17.55636 -17.22780 -17.11000 -16.82080 -16.51104 -16.13946 -15.69607 -15.55171 -15.38436 -15.10134 -14.91876 -14.83878 -14.45436 -14.23063 -14.12512 -13.95528 -13.76189 -13.51004 -13.37718 -13.32768 -13.21121 -13.05129 -12.77314 -12.60306 -12.50190 -12.30506 -12.23684 -11.96281 -11.95068 -11.77986 -11.75431 -11.62865 -11.59884 -11.45602 -11.19790 -10.78605 -10.47791 -9.93717 -9.24795 -5.03197 0.20360 0.40423 1.15343 1.27069 1.44073 1.64368 1.96099 2.19096 2.66951 3.08615 3.36819 3.46194 3.51624 3.61158 3.63097 3.65683 3.66910 3.73937 3.82493 3.96768 3.97870 3.98919 4.06858 4.08891 4.15667 4.18500 4.19478 4.25064 4.26889 4.32799 4.35863 4.38108 4.39383 4.52916 4.53478 4.63206 4.68688 4.80880 4.84202 4.95042 4.96114 4.97100 5.01309 5.05309 5.05611 5.20777 5.25536 5.29870 5.35816 5.42241 5.43543 5.68286 6.37946 6.57051 6.65628 6.69374 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.070 4.070 3 Si 0.691 3.309 4 C -0.081 4.081 5 C -0.155 4.155 6 C -0.073 4.073 7 C -0.205 4.205 8 C 0.132 3.868 9 O -0.311 6.311 10 C 0.060 3.940 11 C -0.111 4.111 12 C -0.110 4.110 13 C 0.462 3.538 14 O -0.504 6.504 15 O -0.356 6.356 16 C 0.071 3.929 17 C -0.089 4.089 18 H 0.086 0.914 19 C -0.112 4.112 20 C -0.152 4.152 21 C 0.102 3.898 22 H 0.055 0.945 23 O -0.569 6.569 24 C -0.111 4.111 25 C -0.111 4.111 26 C -0.126 4.126 27 H 0.379 0.621 28 H 0.115 0.885 29 H -0.258 1.258 30 H -0.254 1.254 31 H 0.129 0.871 32 H 0.131 0.869 33 H 0.130 0.870 34 H 0.067 0.933 35 H 0.066 0.934 36 H 0.086 0.914 37 H 0.086 0.914 38 H 0.111 0.889 39 H 0.111 0.889 40 H 0.073 0.927 41 H 0.073 0.927 42 H 0.074 0.926 43 H 0.064 0.936 44 H 0.067 0.933 45 H 0.072 0.928 46 H 0.379 0.621 47 H 0.072 0.928 48 H 0.074 0.926 49 H 0.075 0.925 50 H 0.070 0.930 51 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.837 2.711 5.736 6.400 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.181 4.181 3 Si 0.593 3.407 4 C -0.081 4.081 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.086 3.914 9 O -0.225 6.225 10 C -0.015 4.015 11 C -0.149 4.149 12 C -0.148 4.148 13 C 0.305 3.695 14 O -0.391 6.391 15 O -0.273 6.273 16 C -0.003 4.003 17 C -0.108 4.108 18 H 0.104 0.896 19 C -0.149 4.149 20 C -0.190 4.190 21 C 0.044 3.956 22 H 0.073 0.927 23 O -0.375 6.375 24 C -0.149 4.149 25 C -0.148 4.148 26 C -0.144 4.144 27 H 0.227 0.773 28 H 0.132 0.868 29 H -0.182 1.182 30 H -0.179 1.179 31 H 0.146 0.854 32 H 0.148 0.852 33 H 0.148 0.852 34 H 0.085 0.915 35 H 0.085 0.915 36 H 0.104 0.896 37 H 0.105 0.895 38 H 0.129 0.871 39 H 0.129 0.871 40 H 0.091 0.909 41 H 0.091 0.909 42 H 0.093 0.907 43 H 0.083 0.917 44 H 0.085 0.915 45 H 0.091 0.909 46 H 0.226 0.774 47 H 0.091 0.909 48 H 0.092 0.908 49 H 0.093 0.907 50 H 0.088 0.912 51 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 1.474 2.349 3.916 4.799 hybrid contribution -0.148 -0.418 0.451 0.632 sum 1.326 1.931 4.367 4.955 Atomic orbital electron populations 1.86520 1.16906 1.81724 1.49197 1.25122 0.85386 1.10257 0.97323 0.94679 0.81055 0.77831 0.87143 1.20145 0.97826 0.93687 0.96465 1.20907 1.01638 0.99492 0.95185 1.20920 0.97536 0.93703 0.96986 1.21321 1.04659 0.95965 1.00417 1.19012 0.95012 0.82841 0.94499 1.86071 1.74243 1.20028 1.42161 1.22760 0.98947 0.93339 0.86439 1.21309 1.03703 0.92405 0.97439 1.21210 1.04554 0.88265 1.00783 1.23542 0.76397 0.89885 0.79686 1.90724 1.36953 1.75404 1.35999 1.86466 1.72550 1.22846 1.45392 1.23178 1.00675 0.77189 0.99215 1.21274 1.01797 0.94431 0.93250 0.89584 1.21530 0.99929 1.00365 0.93117 1.22276 1.02572 0.95745 0.98379 1.21849 0.97152 0.90681 0.85962 0.92695 1.86520 1.69374 1.64669 1.16918 1.21432 1.01026 1.00291 0.92116 1.21471 1.02109 0.93096 0.98170 1.20277 1.03115 0.93722 0.97308 0.77332 0.86782 1.18235 1.17944 0.85399 0.85151 0.85198 0.91469 0.91535 0.89570 0.89537 0.87113 0.87130 0.90859 0.90907 0.90721 0.91718 0.91477 0.90897 0.77379 0.90905 0.90755 0.90652 0.91177 0.84846 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.41 12.83 -35.23 -0.45 -0.86 16 2 C -0.07 -0.02 2.80 36.01 0.10 0.08 16 3 Si 0.69 -0.64 29.80 -169.99 -5.07 -5.70 16 4 C -0.08 -0.06 5.35 -104.64 -0.56 -0.62 16 5 C -0.15 0.06 8.67 -39.56 -0.34 -0.28 16 6 C -0.07 0.05 10.04 -39.61 -0.40 -0.35 16 7 C -0.20 0.01 9.04 -39.43 -0.36 -0.35 16 8 C 0.13 0.23 6.69 -39.21 -0.26 -0.03 16 9 O -0.31 -0.59 10.14 -19.41 -0.20 -0.79 16 10 C 0.06 -0.09 4.74 37.16 0.18 0.08 16 11 C -0.11 0.13 4.87 -26.73 -0.13 0.00 16 12 C -0.11 0.31 5.81 -27.89 -0.16 0.15 16 13 C 0.46 0.34 7.96 36.00 0.29 0.62 16 14 O -0.50 -2.08 15.73 -18.76 -0.30 -2.38 16 15 O -0.36 -0.11 9.76 -39.26 -0.38 -0.50 16 16 C 0.07 -0.02 4.84 37.16 0.18 0.16 16 17 C -0.09 0.13 2.44 -90.62 -0.22 -0.09 16 18 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 19 C -0.11 0.18 5.10 -26.73 -0.14 0.04 16 20 C -0.15 0.23 5.54 -26.73 -0.15 0.08 16 21 C 0.10 -0.06 3.47 -26.73 -0.09 -0.15 16 22 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 23 O -0.57 -0.42 13.32 -35.23 -0.47 -0.89 16 24 C -0.11 0.07 5.57 -26.75 -0.15 -0.08 16 25 C -0.11 0.20 5.20 -26.75 -0.14 0.06 16 26 C -0.13 -0.26 9.62 -39.43 -0.38 -0.64 16 27 H 0.38 -1.22 8.70 45.56 0.40 -0.82 16 28 H 0.11 0.08 7.96 -51.93 -0.41 -0.33 16 29 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 30 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 31 H 0.13 -0.31 4.90 -52.49 -0.26 -0.57 16 32 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 33 H 0.13 -0.29 6.30 -52.49 -0.33 -0.62 16 34 H 0.07 -0.20 7.65 -51.93 -0.40 -0.60 16 35 H 0.07 -0.19 7.67 -51.93 -0.40 -0.59 16 36 H 0.09 0.02 8.10 -51.93 -0.42 -0.40 16 37 H 0.09 0.01 8.10 -51.93 -0.42 -0.41 16 38 H 0.11 -0.52 8.14 -51.93 -0.42 -0.95 16 39 H 0.11 -0.51 8.14 -51.93 -0.42 -0.93 16 40 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 41 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 42 H 0.07 -0.10 7.82 -51.93 -0.41 -0.50 16 43 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 44 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 45 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 46 H 0.38 -1.18 9.08 45.56 0.41 -0.76 16 47 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 48 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 49 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 50 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 51 H 0.13 0.32 8.06 -52.49 -0.42 -0.10 16 LS Contribution 411.78 15.07 6.21 6.21 Total: 0.00 -9.07 411.78 -11.16 -20.23 By element: Atomic # 1 Polarization: -6.23 SS G_CDS: -7.77 Total: -14.01 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -2.73 Total: -1.32 kcal Atomic # 8 Polarization: -3.61 SS G_CDS: -1.80 Total: -5.41 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.07 Total: -5.70 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -9.07 -11.16 -20.23 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_2308196_16737258.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -182.269 kcal (2) G-P(sol) polarization free energy of solvation -9.070 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -191.339 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.163 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.233 kcal (6) G-S(sol) free energy of system = (1) + (5) -202.502 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds