Wall clock time and date at job start Sat Mar 6 2021 10:00:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86295 * 109.47056 * 2 1 4 4 C 1.50703 * 109.46909 * 120.00397 * 2 1 3 5 5 C 1.34849 * 125.65300 * 64.98272 * 4 2 1 6 6 C 1.40776 * 107.05188 * 179.80135 * 5 4 2 7 7 C 1.36143 * 106.73045 * 0.37407 * 6 5 4 8 8 C 1.47527 * 125.94552 * 179.88504 * 7 6 5 9 9 C 1.39846 * 119.99694 * 179.71552 * 8 7 6 10 10 C 1.36547 * 120.00291 * 179.97438 * 9 8 7 11 11 C 1.39875 * 120.00077 * 0.02562 * 10 9 8 12 12 C 1.47441 * 120.00790 * 179.97438 * 11 10 9 13 13 O 1.21509 * 119.99858 * 359.97438 * 12 11 10 14 14 O 1.34766 * 119.99907 * 180.02562 * 12 11 10 15 15 C 1.45204 * 116.99585 * 180.02562 * 14 12 11 16 16 C 1.50706 * 109.46654 * 179.97438 * 15 14 12 17 17 O 1.20755 * 120.00366 * 0.02562 * 16 15 14 18 18 C 1.50700 * 119.99836 * 179.97438 * 16 15 14 19 19 H 1.09007 * 109.46971 * 314.06351 * 18 16 15 20 20 C 1.53000 * 109.47169 * 74.06315 * 18 16 15 21 21 C 1.52996 * 109.47029 * 59.99984 * 20 18 16 22 22 C 1.53001 * 109.47006 * 60.00185 * 21 20 18 23 23 H 1.08996 * 109.47421 * 60.00080 * 22 21 20 24 24 C 1.52996 * 109.47006 * 179.97438 * 22 21 20 25 25 F 1.39901 * 109.47059 * 179.97438 * 24 22 21 26 26 F 1.39899 * 109.47420 * 299.99770 * 24 22 21 27 27 F 1.39898 * 109.47519 * 59.99757 * 24 22 21 28 28 C 1.53000 * 109.47075 * 299.99786 * 22 21 20 29 29 C 1.52991 * 109.47234 * 194.06756 * 18 16 15 30 30 C 1.39891 * 119.98845 * 0.25861 * 11 10 9 31 31 C 1.36548 * 119.99241 * 359.47758 * 30 11 10 32 32 O 1.34228 * 125.64786 * 245.02000 * 4 2 1 33 33 H 0.96699 * 114.00419 * 299.99979 * 1 2 3 34 34 H 1.09001 * 109.47222 * 240.00204 * 2 1 3 35 35 H 1.48500 * 109.99980 * 178.68008 * 3 2 1 36 36 H 1.48492 * 110.00314 * 299.99799 * 3 2 1 37 37 H 1.07997 * 126.47528 * 0.06895 * 5 4 2 38 38 H 1.08001 * 126.63930 * 180.28209 * 6 5 4 39 39 H 1.07997 * 119.99617 * 0.02562 * 9 8 7 40 40 H 1.08001 * 119.99882 * 179.97438 * 10 9 8 41 41 H 1.08996 * 109.47345 * 59.99548 * 15 14 12 42 42 H 1.09000 * 109.47113 * 299.99315 * 15 14 12 43 43 H 1.09005 * 109.46966 * 180.02562 * 20 18 16 44 44 H 1.09001 * 109.47134 * 300.00287 * 20 18 16 45 45 H 1.08996 * 109.47443 * 299.99755 * 21 20 18 46 46 H 1.09002 * 109.47131 * 179.97438 * 21 20 18 47 47 H 1.09005 * 109.47394 * 300.00177 * 28 22 21 48 48 H 1.09001 * 109.47134 * 179.97438 * 28 22 21 49 49 H 1.08995 * 109.47512 * 59.99481 * 29 18 16 50 50 H 1.08996 * 109.47361 * 180.02562 * 29 18 16 51 51 H 1.08000 * 120.00151 * 179.72851 * 30 11 10 52 52 H 1.08003 * 119.99750 * 180.27798 * 31 30 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.7564 -2.0182 1.5094 6 6 2.3841 -2.2642 2.7452 7 6 2.9068 -1.0783 3.1623 8 6 3.6555 -0.8541 4.4135 9 6 4.1441 0.4206 4.7171 10 6 4.8367 0.6283 5.8754 11 6 5.0578 -0.4339 6.7582 12 6 5.8061 -0.2099 8.0087 13 8 6.2311 0.8975 8.2723 14 8 6.0195 -1.2336 8.8588 15 6 6.7633 -0.9397 10.0708 16 6 6.9017 -2.1957 10.8921 17 8 6.4235 -3.2316 10.4966 18 6 7.6381 -2.1592 12.2064 19 1 8.5726 -1.6113 12.0842 20 6 6.7718 -1.4620 13.2572 21 6 5.4603 -2.2310 13.4286 22 6 5.7628 -3.6601 13.8837 23 1 6.2954 -3.6337 14.8343 24 6 4.4512 -4.4289 14.0557 25 9 4.7279 -5.7358 14.4712 26 9 3.6595 -3.7913 15.0168 27 9 3.7671 -4.4629 12.8359 28 6 6.6292 -4.3573 12.8328 29 6 7.9407 -3.5882 12.6613 30 6 4.5741 -1.7102 6.4515 31 6 3.8769 -1.9164 5.2956 32 8 2.6263 -0.1463 2.2306 33 1 -0.3934 0.4417 0.7650 34 1 1.7923 -0.5138 -0.8900 35 1 3.5345 1.7702 0.0321 36 1 1.5615 2.4678 -1.2084 37 1 1.2370 -2.7412 0.8980 38 1 2.4390 -3.2103 3.2632 39 1 3.9730 1.2408 4.0357 40 1 5.2144 1.6126 6.1096 41 1 6.2315 -0.1844 10.6494 42 1 7.7529 -0.5660 9.8081 43 1 7.3046 -1.4352 14.2077 44 1 6.5562 -0.4439 12.9330 45 1 4.9276 -2.2574 12.4781 46 1 4.8432 -1.7346 14.1776 47 1 6.0965 -4.3838 11.8821 48 1 6.8450 -5.3753 13.1572 49 1 8.5579 -4.0849 11.9127 50 1 8.4729 -3.5618 13.6122 51 1 4.7485 -2.5315 7.1308 52 1 3.4996 -2.9008 5.0610 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_3706302_12428076.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 10:00:57 Heat of formation + Delta-G solvation = -252.128748 kcal Electronic energy + Delta-G solvation = -42472.554459 eV Core-core repulsion = 36342.004132 eV Total energy + Delta-G solvation = -6130.550326 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 439.142 amu Computer time = 2.06 seconds Orbital eigenvalues (eV) -51.15073 -48.64498 -48.62780 -43.76185 -42.03830 -41.35652 -39.96207 -38.41171 -37.98444 -37.47187 -34.42689 -33.66368 -33.44616 -32.35860 -31.97879 -30.89798 -29.97767 -27.32159 -26.72976 -24.91860 -24.06864 -23.88451 -23.67230 -22.61072 -22.17016 -21.97330 -21.33677 -20.24216 -19.46542 -19.29447 -19.18526 -18.88723 -18.62654 -18.33866 -17.86605 -17.79317 -17.49000 -16.85965 -16.69834 -16.61918 -16.14074 -15.85532 -15.75052 -15.72403 -15.56372 -15.39803 -15.18344 -15.08723 -14.85289 -14.80460 -14.78105 -14.73665 -14.51606 -14.47222 -14.35973 -14.24450 -13.99314 -13.94685 -13.77196 -13.75600 -13.49875 -13.24156 -13.22123 -13.16056 -12.85558 -12.79085 -12.24741 -12.20422 -12.15385 -12.09307 -11.94946 -11.82626 -11.38904 -11.26799 -11.19962 -10.77065 -10.59375 -10.29035 -10.26907 -9.06068 -5.03516 -0.91116 0.26244 0.54467 0.81602 1.13866 1.25209 1.28090 1.42410 1.67061 1.74522 1.77484 1.88608 2.67499 2.73754 2.85517 2.96005 3.03888 3.21834 3.38795 3.54004 3.57505 3.63393 3.65700 3.77777 3.84918 3.88068 3.94627 3.95896 4.02055 4.09468 4.11690 4.13032 4.17433 4.25776 4.28471 4.33070 4.42091 4.50139 4.51813 4.64154 4.69962 4.73995 4.85009 4.85114 4.88856 4.91389 5.00549 5.02079 5.10849 5.11748 5.16158 5.17891 5.21067 5.24192 5.38996 5.40196 5.59973 5.93959 6.40285 6.54017 6.59826 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.028 4.028 3 Si 0.776 3.224 4 C -0.049 4.049 5 C -0.186 4.186 6 C -0.178 4.178 7 C 0.007 3.993 8 C 0.019 3.981 9 C -0.119 4.119 10 C -0.049 4.049 11 C -0.141 4.141 12 C 0.513 3.487 13 O -0.525 6.525 14 O -0.345 6.345 15 C 0.003 3.997 16 C 0.363 3.637 17 O -0.452 6.452 18 C -0.127 4.127 19 H 0.143 0.857 20 C -0.101 4.101 21 C -0.130 4.130 22 C -0.122 4.122 23 H 0.137 0.863 24 C 0.443 3.557 25 F -0.193 7.193 26 F -0.190 7.190 27 F -0.194 7.194 28 C -0.145 4.145 29 C -0.098 4.098 30 C -0.051 4.051 31 C -0.110 4.110 32 O -0.168 6.168 33 H 0.400 0.600 34 H 0.137 0.863 35 H -0.293 1.293 36 H -0.278 1.278 37 H 0.164 0.836 38 H 0.175 0.825 39 H 0.152 0.848 40 H 0.148 0.852 41 H 0.122 0.878 42 H 0.125 0.875 43 H 0.110 0.890 44 H 0.096 0.904 45 H 0.055 0.945 46 H 0.088 0.912 47 H 0.088 0.912 48 H 0.070 0.930 49 H 0.071 0.929 50 H 0.100 0.900 51 H 0.153 0.847 52 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.069 2.901 2.933 5.141 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.138 4.138 3 Si 0.680 3.320 4 C -0.100 4.100 5 C -0.205 4.205 6 C -0.197 4.197 7 C -0.042 4.042 8 C 0.019 3.981 9 C -0.137 4.137 10 C -0.067 4.067 11 C -0.142 4.142 12 C 0.360 3.640 13 O -0.416 6.416 14 O -0.261 6.261 15 C -0.070 4.070 16 C 0.238 3.762 17 O -0.324 6.324 18 C -0.146 4.146 19 H 0.161 0.839 20 C -0.138 4.138 21 C -0.168 4.168 22 C -0.141 4.141 23 H 0.155 0.845 24 C 0.390 3.610 25 F -0.174 7.174 26 F -0.172 7.172 27 F -0.176 7.176 28 C -0.183 4.183 29 C -0.135 4.135 30 C -0.069 4.069 31 C -0.128 4.128 32 O -0.066 6.066 33 H 0.250 0.750 34 H 0.154 0.846 35 H -0.220 1.220 36 H -0.205 1.205 37 H 0.181 0.819 38 H 0.192 0.808 39 H 0.170 0.830 40 H 0.165 0.835 41 H 0.140 0.860 42 H 0.142 0.858 43 H 0.128 0.872 44 H 0.115 0.885 45 H 0.074 0.926 46 H 0.107 0.893 47 H 0.106 0.894 48 H 0.088 0.912 49 H 0.089 0.911 50 H 0.118 0.882 51 H 0.170 0.830 52 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 3.553 3.218 1.890 5.153 hybrid contribution -0.370 -1.051 -0.190 1.130 sum 3.183 2.167 1.701 4.210 Atomic orbital electron populations 1.86533 1.15951 1.82132 1.50328 1.24503 0.85395 1.11346 0.92558 0.93310 0.78073 0.75322 0.85277 1.23254 1.00248 0.94180 0.92295 1.21816 1.04236 0.95999 0.98448 1.22238 1.01164 0.99010 0.97267 1.20543 1.04512 0.87790 0.91391 1.18210 0.95256 0.94846 0.89830 1.21148 0.98117 0.96953 0.97476 1.21041 0.94763 0.98946 0.91971 1.19307 1.04761 0.96405 0.93772 1.21308 0.76945 0.82003 0.83771 1.90852 1.49421 1.25429 1.75856 1.86627 1.68792 1.39018 1.31658 1.23891 0.99445 0.99629 0.84065 1.24956 0.76210 0.87501 0.87518 1.90355 1.38786 1.33652 1.69639 1.21822 1.01507 0.99816 0.91430 0.83946 1.21553 0.93451 0.98955 0.99870 1.21754 1.00081 0.92634 1.02298 1.22572 0.90241 0.96324 1.04990 0.84545 1.21193 0.88584 0.78241 0.73031 1.93162 1.93725 1.40101 1.90420 1.93165 1.77436 1.81687 1.64897 1.93162 1.82577 1.96444 1.45401 1.22045 0.97472 0.99341 0.99401 1.21394 0.95932 0.92819 1.03367 1.21272 0.93249 0.96009 0.96377 1.21037 0.99155 0.99486 0.93096 1.83909 1.57874 1.38198 1.26597 0.74971 0.84571 1.21978 1.20472 0.81869 0.80783 0.83049 0.83457 0.86036 0.85762 0.87210 0.88524 0.92627 0.89292 0.89412 0.91178 0.91060 0.88171 0.82964 0.82326 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.89 12.88 -148.98 -1.92 -1.03 16 2 C -0.03 0.04 2.98 71.24 0.21 0.26 16 3 Si 0.78 -1.43 32.11 68.60 2.20 0.78 16 4 C -0.05 -0.05 6.21 24.91 0.15 0.10 16 5 C -0.19 -0.20 10.78 22.11 0.24 0.04 16 6 C -0.18 -0.07 10.26 22.40 0.23 0.16 16 7 C 0.01 0.01 7.02 24.23 0.17 0.18 16 8 C 0.02 0.02 5.88 -20.05 -0.12 -0.10 16 9 C -0.12 -0.05 9.66 22.26 0.22 0.16 16 10 C -0.05 -0.08 9.53 22.27 0.21 0.14 16 11 C -0.14 -0.42 5.88 -20.06 -0.12 -0.54 16 12 C 0.51 2.54 7.89 70.25 0.55 3.10 16 13 O -0.52 -4.38 16.12 19.81 0.32 -4.06 16 14 O -0.34 -1.17 8.99 -50.37 -0.45 -1.62 16 15 C 0.00 -0.01 5.87 71.24 0.42 0.41 16 16 C 0.36 -1.04 5.12 29.10 0.15 -0.89 16 17 O -0.45 -2.20 13.38 17.41 0.23 -1.97 16 18 C -0.13 1.22 2.94 -11.54 -0.03 1.18 16 19 H 0.14 -2.19 8.14 -2.38 -0.02 -2.21 16 20 C -0.10 1.14 5.42 30.59 0.17 1.30 16 21 C -0.13 0.67 4.74 30.59 0.15 0.81 16 22 C -0.12 0.37 2.16 -10.79 -0.02 0.34 16 23 H 0.14 -1.04 8.14 -2.39 -0.02 -1.06 16 24 C 0.44 1.61 2.69 71.98 0.19 1.81 16 25 F -0.19 -1.15 16.80 44.97 0.76 -0.39 16 26 F -0.19 -0.90 16.80 44.97 0.76 -0.15 16 27 F -0.19 -1.53 16.28 44.97 0.73 -0.80 16 28 C -0.15 0.23 4.67 30.60 0.14 0.37 16 29 C -0.10 0.70 5.21 30.59 0.16 0.86 16 30 C -0.05 -0.02 9.56 22.27 0.21 0.19 16 31 C -0.11 0.12 9.50 22.26 0.21 0.33 16 32 O -0.17 -0.40 8.79 -5.95 -0.05 -0.45 16 33 H 0.40 -3.69 8.70 -74.06 -0.64 -4.34 16 34 H 0.14 -0.32 7.96 -2.39 -0.02 -0.34 16 35 H -0.29 -1.43 7.11 99.48 0.71 -0.73 16 36 H -0.28 -0.97 7.11 99.48 0.71 -0.26 16 37 H 0.16 -0.20 8.06 -2.91 -0.02 -0.23 16 38 H 0.17 -0.76 7.25 -2.91 -0.02 -0.78 16 39 H 0.15 -0.36 7.90 -2.91 -0.02 -0.38 16 40 H 0.15 0.05 7.64 -2.91 -0.02 0.03 16 41 H 0.12 -0.76 7.84 -2.39 -0.02 -0.78 16 42 H 0.12 -0.82 8.14 -2.39 -0.02 -0.84 16 43 H 0.11 -1.61 8.14 -2.38 -0.02 -1.63 16 44 H 0.10 -1.32 7.84 -2.39 -0.02 -1.34 16 45 H 0.05 -0.04 6.85 -2.39 -0.02 -0.06 16 46 H 0.09 -0.53 7.80 -2.39 -0.02 -0.55 16 47 H 0.09 0.36 4.73 -2.38 -0.01 0.35 16 48 H 0.07 -0.05 7.80 -2.39 -0.02 -0.07 16 49 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 50 H 0.10 -1.12 8.14 -2.39 -0.02 -1.14 16 51 H 0.15 -0.14 7.59 -2.91 -0.02 -0.16 16 52 H 0.16 -0.90 6.97 -2.91 -0.02 -0.92 16 Total: 0.00 -23.77 444.09 6.47 -17.30 By element: Atomic # 1 Polarization: -18.23 SS G_CDS: 0.40 Total: -17.83 kcal Atomic # 6 Polarization: 6.73 SS G_CDS: 3.49 Total: 10.23 kcal Atomic # 8 Polarization: -7.27 SS G_CDS: -1.87 Total: -9.14 kcal Atomic # 9 Polarization: -3.58 SS G_CDS: 2.24 Total: -1.34 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: 2.20 Total: 0.78 kcal Total: -23.77 6.47 -17.30 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_3706302_12428076.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -234.825 kcal (2) G-P(sol) polarization free energy of solvation -23.769 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -258.594 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.465 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.304 kcal (6) G-S(sol) free energy of system = (1) + (5) -252.129 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.06 seconds