Wall clock time and date at job start Sat Mar 6 2021 09:23:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.42901 * 114.00147 * 2 1 4 4 C 1.53002 * 112.84757 * 294.01703 * 3 2 1 5 5 F 1.39898 * 109.47009 * 195.94584 * 4 3 2 6 6 F 1.39900 * 109.47418 * 315.94511 * 4 3 2 7 7 F 1.39898 * 109.47359 * 75.94645 * 4 3 2 8 8 C 1.54047 * 113.68658 * 162.74459 * 3 2 1 9 9 C 1.53780 * 86.98301 * 270.87084 * 8 3 2 10 10 H 1.08996 * 113.61613 * 219.97879 * 9 8 3 11 11 C 1.53005 * 113.61078 * 89.16685 * 9 8 3 12 12 O 1.45192 * 109.47216 * 85.86463 * 11 9 8 13 13 C 1.34773 * 117.00019 * 179.97438 * 12 11 9 14 14 O 1.21507 * 119.99499 * 359.97438 * 13 12 11 15 15 C 1.47439 * 120.00081 * 179.97438 * 13 12 11 16 16 C 1.39882 * 120.00462 * 359.72107 * 15 13 12 17 17 C 1.36545 * 119.99774 * 179.73904 * 16 15 13 18 18 C 1.39854 * 120.00217 * 0.56160 * 17 16 15 19 19 C 1.47515 * 119.99792 * 179.71756 * 18 17 16 20 20 C 1.36146 * 125.94793 * 359.68943 * 19 18 17 21 21 C 1.40775 * 106.73313 * 179.85561 * 20 19 18 22 22 C 1.34855 * 107.05197 * 0.40796 * 21 20 19 23 23 C 1.50701 * 125.64669 * 179.77908 * 22 21 20 24 24 O 1.42892 * 109.47123 * 64.99401 * 23 22 21 25 25 Si 1.86305 * 109.46672 * 184.98875 * 23 22 21 26 26 O 1.34224 * 108.69993 * 359.75215 * 22 21 20 27 27 C 1.39848 * 120.00660 * 359.69477 * 18 17 16 28 28 C 1.36556 * 120.00520 * 0.02562 * 27 18 17 29 29 C 1.53775 * 87.17491 * 334.57214 * 9 8 3 30 30 H 1.08998 * 109.46789 * 64.82568 * 1 2 3 31 31 H 1.08997 * 109.47225 * 184.82855 * 1 2 3 32 32 H 1.09004 * 109.46503 * 304.83200 * 1 2 3 33 33 H 1.09000 * 113.61022 * 156.37318 * 8 3 2 34 34 H 1.08997 * 113.70029 * 25.38782 * 8 3 2 35 35 H 1.08994 * 109.47136 * 325.85458 * 11 9 8 36 36 H 1.09001 * 109.46731 * 205.86037 * 11 9 8 37 37 H 1.08005 * 120.00267 * 0.02962 * 16 15 13 38 38 H 1.07998 * 120.00253 * 180.25774 * 17 16 15 39 39 H 1.07999 * 126.63104 * 359.97438 * 20 19 18 40 40 H 1.08000 * 126.47226 * 180.13965 * 21 20 19 41 41 H 1.08997 * 109.47590 * 304.98304 * 23 22 21 42 42 H 0.96696 * 114.00612 * 59.99418 * 24 23 22 43 43 H 1.48504 * 110.00000 * 180.02562 * 25 23 22 44 44 H 1.48500 * 109.99796 * 301.31972 * 25 23 22 45 45 H 1.07999 * 120.00109 * 180.02562 * 27 18 17 46 46 H 1.08003 * 120.00270 * 180.02562 * 28 27 18 47 47 H 1.09001 * 113.61424 * 140.01823 * 29 9 8 48 48 H 1.08999 * 113.61585 * 270.83865 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 1.7277 2.0816 -1.2879 5 9 2.6024 3.1696 -1.3781 6 9 1.9147 1.2404 -2.3900 7 9 0.4076 2.5445 -1.2733 8 6 3.4928 1.3228 0.4185 9 6 2.9983 1.4840 1.8656 10 1 3.5938 2.1807 2.4555 11 6 2.7568 0.1540 2.5825 12 8 4.0004 -0.3123 3.1692 13 6 3.9597 -1.4794 3.8421 14 8 2.9135 -2.0901 3.9361 15 6 5.1845 -2.0149 4.4639 16 6 6.3902 -1.3147 4.3506 17 6 7.5234 -1.8081 4.9311 18 6 7.4811 -3.0194 5.6289 19 6 8.7067 -3.5554 6.2507 20 6 9.9391 -2.9778 6.2158 21 6 10.8039 -3.8241 6.9353 22 6 10.0683 -4.8706 7.3623 23 6 10.5821 -6.0330 8.1722 24 8 11.0064 -5.5690 9.4553 25 14 9.2237 -7.2903 8.3845 26 8 8.8027 -4.7050 6.9471 27 6 6.2770 -3.7222 5.7377 28 6 5.1424 -3.2262 5.1622 29 6 1.7213 2.1085 1.2792 30 1 -0.3633 0.4371 -0.9301 31 1 -0.3633 -1.0240 0.0865 32 1 -0.3632 0.5870 0.8436 33 1 4.0415 2.1877 0.0457 34 1 4.0105 0.3811 0.2363 35 1 2.3935 -0.5836 1.8670 36 1 2.0145 0.2943 3.3682 37 1 6.4238 -0.3814 3.8080 38 1 8.4533 -1.2655 4.8473 39 1 10.2019 -2.0489 5.7315 40 1 11.8583 -3.6673 7.1084 41 1 11.4245 -6.4922 7.6549 42 1 10.3063 -5.1480 9.9727 43 1 9.7175 -8.4416 9.1821 44 1 8.0569 -6.6681 9.0602 45 1 6.2444 -4.6574 6.2770 46 1 4.2124 -3.7688 5.2466 47 1 0.8097 1.8005 1.7914 48 1 1.7860 3.1879 1.1427 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_3706302_17321610.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:23:31 Heat of formation + Delta-G solvation = -225.710571 kcal Electronic energy + Delta-G solvation = -38665.772881 eV Core-core repulsion = 32820.131892 eV Total energy + Delta-G solvation = -5845.640989 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 413.126 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -51.17900 -48.72713 -48.61064 -43.75465 -41.90082 -41.21762 -39.89551 -38.16585 -37.72336 -36.89652 -34.41056 -33.58763 -32.37506 -31.05819 -30.45197 -28.38682 -27.72654 -26.95975 -26.79697 -24.76961 -24.07420 -23.40565 -22.56788 -22.10642 -21.32428 -20.74937 -19.81358 -19.47690 -19.34809 -19.23480 -18.85868 -18.19153 -17.69237 -17.53254 -17.49699 -17.21659 -16.76740 -16.58385 -16.13218 -15.92460 -15.85736 -15.71176 -15.59044 -15.51409 -15.29458 -15.10577 -14.93440 -14.81000 -14.78462 -14.73370 -14.45918 -14.34463 -14.29255 -13.99463 -13.97284 -13.82347 -13.67772 -13.43438 -13.26076 -13.17522 -12.90179 -12.87793 -12.44360 -12.25322 -12.14080 -12.07727 -11.80114 -11.67420 -11.52955 -11.18373 -10.88335 -10.86515 -10.65264 -10.29306 -9.04944 -5.02594 -0.86335 0.23615 0.59603 1.07578 1.33308 1.43008 1.46896 1.53735 1.67567 1.75167 1.89015 1.97515 2.51629 2.60428 2.69535 2.79581 3.10516 3.13823 3.24639 3.29247 3.39192 3.52176 3.57714 3.72725 3.76835 3.84772 3.92344 4.04882 4.09869 4.11974 4.15426 4.23020 4.24254 4.30068 4.32638 4.36628 4.45867 4.48831 4.54273 4.62832 4.64145 4.67139 4.73553 4.80236 4.82641 4.87712 5.09544 5.12831 5.18726 5.36635 5.40123 5.57800 5.59978 5.93018 6.19548 6.70843 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.332 6.332 3 C 0.037 3.963 4 C 0.437 3.563 5 F -0.175 7.175 6 F -0.174 7.174 7 F -0.182 7.182 8 C -0.112 4.112 9 C -0.100 4.100 10 H 0.108 0.892 11 C 0.078 3.922 12 O -0.350 6.350 13 C 0.511 3.489 14 O -0.501 6.501 15 C -0.124 4.124 16 C -0.054 4.054 17 C -0.112 4.112 18 C 0.023 3.977 19 C 0.022 3.978 20 C -0.177 4.177 21 C -0.173 4.173 22 C -0.044 4.044 23 C -0.035 4.035 24 O -0.520 6.520 25 Si 0.699 3.301 26 O -0.162 6.162 27 C -0.115 4.115 28 C -0.047 4.047 29 C -0.143 4.143 30 H 0.054 0.946 31 H 0.103 0.897 32 H 0.056 0.944 33 H 0.118 0.882 34 H 0.099 0.901 35 H 0.094 0.906 36 H 0.076 0.924 37 H 0.146 0.854 38 H 0.139 0.861 39 H 0.156 0.844 40 H 0.155 0.845 41 H 0.138 0.862 42 H 0.381 0.619 43 H -0.248 1.248 44 H -0.255 1.255 45 H 0.140 0.860 46 H 0.144 0.856 47 H 0.095 0.905 48 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.321 1.341 0.418 1.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.250 6.250 3 C -0.005 4.005 4 C 0.383 3.617 5 F -0.156 7.156 6 F -0.155 7.155 7 F -0.163 7.163 8 C -0.149 4.149 9 C -0.118 4.118 10 H 0.126 0.874 11 C 0.005 3.995 12 O -0.267 6.267 13 C 0.355 3.645 14 O -0.390 6.390 15 C -0.125 4.125 16 C -0.072 4.072 17 C -0.130 4.130 18 C 0.022 3.978 19 C -0.028 4.028 20 C -0.196 4.196 21 C -0.192 4.192 22 C -0.094 4.094 23 C -0.144 4.144 24 O -0.327 6.327 25 Si 0.598 3.402 26 O -0.059 6.059 27 C -0.133 4.133 28 C -0.065 4.065 29 C -0.181 4.181 30 H 0.072 0.928 31 H 0.121 0.879 32 H 0.074 0.926 33 H 0.136 0.864 34 H 0.118 0.882 35 H 0.112 0.888 36 H 0.095 0.905 37 H 0.164 0.836 38 H 0.157 0.843 39 H 0.174 0.826 40 H 0.173 0.827 41 H 0.156 0.844 42 H 0.229 0.771 43 H -0.172 1.172 44 H -0.179 1.179 45 H 0.158 0.842 46 H 0.162 0.838 47 H 0.114 0.886 48 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 0.889 0.145 0.819 1.217 hybrid contribution -0.280 1.403 0.347 1.472 sum 0.609 1.548 1.166 2.031 Atomic orbital electron populations 1.23155 0.79348 1.04485 1.01547 1.88096 1.21265 1.21794 1.93809 1.24107 1.00081 0.86404 0.89932 1.21165 0.74312 0.78699 0.87566 1.93179 1.69312 1.56528 1.96604 1.93223 1.94800 1.70823 1.56657 1.93194 1.36632 1.89639 1.96843 1.23319 0.90879 1.05807 0.94854 1.22110 0.97657 0.96407 0.95658 0.87403 1.23017 0.83583 0.95394 0.97506 1.86475 1.38390 1.37687 1.64156 1.21032 0.88713 0.78817 0.75896 1.90876 1.32101 1.58726 1.57249 1.19239 0.91804 0.97569 1.03851 1.21136 0.90726 0.99302 0.96019 1.20818 0.99490 0.94758 0.97939 1.18067 0.89626 0.94233 0.95827 1.20376 0.94956 0.87041 1.00390 1.21936 0.91668 1.02274 1.03750 1.21587 1.01432 0.94754 1.01435 1.22941 0.81838 1.00784 1.03856 1.24360 1.08970 0.97117 0.83976 1.86665 1.39813 1.79345 1.26893 0.94458 0.76318 0.79102 0.90362 1.83943 1.29756 1.36653 1.55524 1.21010 0.91201 1.00722 1.00380 1.20988 0.99339 0.93224 0.92988 1.23591 0.99600 1.01170 0.93691 0.92782 0.87882 0.92574 0.86424 0.88217 0.88839 0.90547 0.83582 0.84316 0.82610 0.82687 0.84427 0.77099 1.17212 1.17909 0.84205 0.83811 0.88613 0.86776 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.30 101.05 1.04 1.03 16 2 O -0.33 -0.15 8.35 -35.23 -0.29 -0.44 16 3 C 0.04 -0.03 0.85 -89.67 -0.08 -0.10 16 4 C 0.44 0.37 2.52 37.16 0.09 0.46 16 5 F -0.17 -0.13 15.82 2.25 0.04 -0.10 16 6 F -0.17 -0.47 17.10 2.25 0.04 -0.43 16 7 F -0.18 -0.22 15.39 2.25 0.03 -0.19 16 8 C -0.11 0.21 6.92 -25.78 -0.18 0.03 16 9 C -0.10 0.24 4.20 -89.81 -0.38 -0.14 16 10 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 11 C 0.08 -0.03 5.07 37.16 0.19 0.16 16 12 O -0.35 -0.24 9.45 -40.69 -0.38 -0.62 16 13 C 0.51 1.13 7.89 34.48 0.27 1.40 16 14 O -0.50 -2.41 16.12 -19.27 -0.31 -2.72 16 15 C -0.12 -0.09 5.88 -104.92 -0.62 -0.71 16 16 C -0.05 0.06 9.56 -39.58 -0.38 -0.32 16 17 C -0.11 0.14 9.50 -39.59 -0.38 -0.23 16 18 C 0.02 0.00 5.88 -104.91 -0.62 -0.61 16 19 C 0.02 0.02 7.02 -36.55 -0.26 -0.24 16 20 C -0.18 0.01 10.26 -39.38 -0.40 -0.39 16 21 C -0.17 -0.04 10.78 -39.82 -0.43 -0.47 16 22 C -0.04 -0.01 6.21 -35.51 -0.22 -0.23 16 23 C -0.03 0.03 2.98 36.01 0.11 0.14 16 24 O -0.52 -0.13 12.88 -35.23 -0.45 -0.58 16 25 Si 0.70 -0.82 32.11 -169.99 -5.46 -6.27 16 26 O -0.16 -0.17 8.79 4.71 0.04 -0.13 16 27 C -0.12 0.00 9.66 -39.59 -0.38 -0.38 16 28 C -0.05 -0.02 9.53 -39.57 -0.38 -0.40 16 29 C -0.14 0.38 6.51 -25.92 -0.17 0.22 16 30 H 0.05 -0.04 6.69 -51.93 -0.35 -0.39 16 31 H 0.10 -0.22 8.14 -51.93 -0.42 -0.65 16 32 H 0.06 -0.14 6.55 -51.93 -0.34 -0.48 16 33 H 0.12 -0.35 7.02 -51.93 -0.36 -0.72 16 34 H 0.10 -0.13 8.10 -51.93 -0.42 -0.55 16 35 H 0.09 0.08 6.09 -51.93 -0.32 -0.24 16 36 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 37 H 0.15 -0.40 7.60 -52.48 -0.40 -0.80 16 38 H 0.14 -0.48 6.97 -52.49 -0.37 -0.84 16 39 H 0.16 -0.36 7.25 -52.49 -0.38 -0.74 16 40 H 0.16 -0.14 8.06 -52.49 -0.42 -0.56 16 41 H 0.14 -0.34 7.96 -51.93 -0.41 -0.75 16 42 H 0.38 -0.92 8.70 45.56 0.40 -0.52 16 43 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 44 H -0.26 -0.37 7.11 56.52 0.40 0.04 16 45 H 0.14 -0.16 7.90 -52.49 -0.41 -0.58 16 46 H 0.14 0.01 7.64 -52.48 -0.40 -0.39 16 47 H 0.10 -0.31 6.63 -51.93 -0.34 -0.65 16 48 H 0.11 -0.42 8.05 -51.93 -0.42 -0.84 16 LS Contribution 417.34 15.07 6.29 6.29 Total: 0.00 -7.82 417.34 -9.03 -16.86 By element: Atomic # 1 Polarization: -5.45 SS G_CDS: -5.42 Total: -10.87 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -3.16 Total: -0.80 kcal Atomic # 8 Polarization: -3.10 SS G_CDS: -1.40 Total: -4.50 kcal Atomic # 9 Polarization: -0.82 SS G_CDS: 0.11 Total: -0.71 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.46 Total: -6.27 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -7.82 -9.03 -16.86 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_3706302_17321610.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -208.853 kcal (2) G-P(sol) polarization free energy of solvation -7.824 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -216.677 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.033 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.857 kcal (6) G-S(sol) free energy of system = (1) + (5) -225.711 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds