Wall clock time and date at job start Sat Mar 6 2021 06:25:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.36005 * 116.99931 * 2 1 4 4 C 1.39152 * 120.07399 * 179.97438 * 3 2 1 5 5 O 1.35995 * 120.07168 * 359.97438 * 4 3 2 6 6 C 1.42905 * 116.99762 * 179.72534 * 5 4 3 7 7 C 1.50699 * 109.46972 * 180.02562 * 6 5 4 8 8 O 1.20828 * 120.00000 * 0.02562 * 7 6 5 9 9 O 1.34231 * 120.00154 * 180.02562 * 7 6 5 10 10 C 1.45196 * 117.00262 * 180.02562 * 9 7 6 11 11 C 1.52997 * 109.47382 * 179.97438 * 10 9 7 12 12 H 1.08999 * 112.84791 * 45.32720 * 11 10 9 13 13 C 1.53779 * 113.61611 * 176.52939 * 11 10 9 14 14 C 1.53781 * 87.07855 * 139.97958 * 13 11 10 15 15 H 1.09006 * 113.61915 * 89.20237 * 14 13 11 16 16 O 1.42905 * 113.61293 * 220.01462 * 14 13 11 17 17 C 1.53784 * 113.61063 * 274.13772 * 11 10 9 18 18 C 1.38564 * 119.85416 * 179.72292 * 4 3 2 19 19 C 1.38240 * 119.99685 * 0.27898 * 18 4 3 20 20 N 1.48010 * 119.92644 * 179.97438 * 19 18 4 21 21 O 1.21803 * 119.99567 * 359.97438 * 20 19 18 22 22 O 1.21801 * 120.00061 * 179.97438 * 20 19 18 23 23 C 1.38253 * 120.14870 * 0.02562 * 19 18 4 24 24 C 1.50699 * 119.92498 * 179.97438 * 23 19 18 25 25 O 1.42900 * 109.47625 * 75.00057 * 24 23 19 26 26 Si 1.86304 * 109.46778 * 195.00121 * 24 23 19 27 27 C 1.38239 * 120.14519 * 359.97438 * 23 19 18 28 28 H 1.08996 * 109.47622 * 300.00030 * 1 2 3 29 29 H 1.08999 * 109.47026 * 60.00576 * 1 2 3 30 30 H 1.09003 * 109.46564 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47187 * 300.00191 * 6 5 4 32 32 H 1.09001 * 109.46558 * 60.00239 * 6 5 4 33 33 H 1.09003 * 109.46752 * 299.99695 * 10 9 7 34 34 H 1.09001 * 109.46943 * 59.99499 * 10 9 7 35 35 H 1.09003 * 113.61009 * 254.52395 * 13 11 10 36 36 H 1.09001 * 113.61588 * 25.43112 * 13 11 10 37 37 H 0.96700 * 114.00188 * 180.02562 * 16 14 13 38 38 H 1.09000 * 113.61629 * 334.56569 * 17 11 10 39 39 H 1.08998 * 113.61610 * 105.46966 * 17 11 10 40 40 H 1.07997 * 120.00149 * 180.25333 * 18 4 3 41 41 H 1.09000 * 109.47263 * 314.99873 * 24 23 19 42 42 H 0.96698 * 114.00193 * 179.97438 * 25 24 23 43 43 H 1.48502 * 109.99675 * 299.99568 * 26 24 23 44 44 H 1.48496 * 110.00331 * 61.31878 * 26 24 23 45 45 H 1.08000 * 120.00058 * 180.02562 * 27 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 3.4359 1.2865 0.0005 5 8 4.1795 0.1478 0.0016 6 6 5.6003 0.3009 -0.0040 7 6 6.2519 -1.0580 -0.0025 8 8 5.5696 -2.0552 0.0023 9 8 7.5903 -1.1606 -0.0066 10 6 8.1487 -2.5009 -0.0055 11 6 9.6764 -2.4169 -0.0112 12 1 10.0628 -1.6869 0.7000 13 6 10.3690 -3.7872 0.0748 14 6 11.3835 -3.2507 -0.9488 15 1 12.2385 -2.7495 -0.4948 16 8 11.7636 -4.2118 -1.9357 17 6 10.2807 -2.2849 -1.4191 18 6 4.0602 2.5235 -0.0053 19 6 3.3028 3.6799 -0.0058 20 7 3.9713 5.0004 -0.0114 21 8 5.1875 5.0672 -0.0151 22 8 3.3053 6.0202 -0.0123 23 6 1.9223 3.6058 0.0001 24 6 1.1015 4.8696 0.0001 25 8 1.1292 5.4557 -1.3029 26 14 -0.6577 4.4675 0.4630 27 6 1.2932 2.3748 0.0059 28 1 -0.3634 0.5138 0.8899 29 1 -0.3633 0.5137 -0.8900 30 1 -0.3632 -1.0277 -0.0005 31 1 5.9033 0.8478 -0.8969 32 1 5.9096 0.8535 0.8831 33 1 7.8170 -3.0319 0.8868 34 1 7.8112 -3.0358 -0.8932 35 1 10.8038 -3.9960 1.0523 36 1 9.7602 -4.6086 -0.3030 37 1 12.4018 -3.8804 -2.5822 38 1 9.6478 -2.6948 -2.2062 39 1 10.6444 -1.2828 -1.6460 40 1 5.1385 2.5842 -0.0090 41 1 1.5160 5.5720 0.7232 42 1 0.6201 6.2745 -1.3768 43 1 -1.2342 3.5107 -0.5154 44 1 -0.7035 3.8868 1.8289 45 1 0.2146 2.3196 0.0100 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_4066032_11354868.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:25:34 Heat of formation + Delta-G solvation = -160.322309 kcal Electronic energy + Delta-G solvation = -33599.092206 eV Core-core repulsion = 28555.166004 eV Total energy + Delta-G solvation = -5043.926201 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.133 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -43.27207 -42.23075 -41.66213 -40.46339 -39.92677 -39.18769 -37.75382 -37.49175 -37.08453 -36.06517 -32.90234 -32.68778 -30.95079 -29.32508 -28.92828 -27.89637 -26.88803 -25.86141 -24.27778 -23.58451 -23.11339 -22.25910 -20.79068 -20.71748 -19.71988 -19.57433 -18.86686 -18.80236 -18.75918 -18.26734 -18.22676 -18.15815 -17.88230 -17.37158 -17.23565 -16.73968 -16.61121 -16.41897 -16.03498 -15.61782 -15.40054 -15.12564 -14.87151 -14.58918 -14.27372 -14.16002 -14.08226 -13.74913 -13.59138 -13.53286 -13.13726 -12.89210 -12.76777 -12.67852 -12.53723 -12.49740 -12.43227 -12.26831 -12.26517 -11.97158 -11.87132 -11.80306 -11.60310 -11.34971 -10.86068 -10.61534 -10.30662 -9.60854 -5.21124 -1.24652 -0.56503 0.29144 0.39292 0.69926 0.94404 1.00093 1.39018 1.63496 1.65533 1.80903 1.99301 2.78440 2.97374 3.06558 3.16385 3.26044 3.31165 3.36931 3.44913 3.58242 3.59233 3.60006 3.71060 3.76079 3.78532 3.81751 3.86058 3.88400 4.03083 4.10059 4.11190 4.19066 4.30448 4.31057 4.49982 4.55267 4.60789 4.63569 4.64596 4.82910 4.96827 5.14375 5.26510 5.33036 5.44711 5.83362 6.51619 6.52338 6.61326 6.77686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.284 6.284 3 C 0.172 3.828 4 C 0.110 3.890 5 O -0.270 6.270 6 C 0.059 3.941 7 C 0.466 3.534 8 O -0.478 6.478 9 O -0.349 6.349 10 C 0.081 3.919 11 C -0.112 4.112 12 H 0.108 0.892 13 C -0.120 4.120 14 C 0.077 3.923 15 H 0.086 0.914 16 O -0.560 6.560 17 C -0.165 4.165 18 C -0.115 4.115 19 C -0.024 4.024 20 N 0.036 4.964 21 O -0.172 6.172 22 O -0.131 6.131 23 C 0.008 3.992 24 C -0.083 4.083 25 O -0.534 6.534 26 Si 0.688 3.312 27 C -0.186 4.186 28 H 0.061 0.939 29 H 0.064 0.936 30 H 0.117 0.883 31 H 0.114 0.886 32 H 0.114 0.886 33 H 0.078 0.922 34 H 0.077 0.923 35 H 0.082 0.918 36 H 0.095 0.905 37 H 0.381 0.619 38 H 0.091 0.909 39 H 0.076 0.924 40 H 0.171 0.829 41 H 0.102 0.898 42 H 0.390 0.610 43 H -0.248 1.248 44 H -0.250 1.250 45 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.928 1.724 1.145 2.829 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.195 6.195 3 C 0.124 3.876 4 C 0.063 3.937 5 O -0.183 6.183 6 C -0.017 4.017 7 C 0.307 3.693 8 O -0.363 6.363 9 O -0.267 6.267 10 C 0.008 3.992 11 C -0.130 4.130 12 H 0.126 0.874 13 C -0.157 4.157 14 C 0.018 3.982 15 H 0.104 0.896 16 O -0.365 6.365 17 C -0.203 4.203 18 C -0.134 4.134 19 C -0.108 4.108 20 N 0.555 4.445 21 O -0.383 6.383 22 O -0.352 6.352 23 C 0.006 3.994 24 C -0.193 4.193 25 O -0.341 6.341 26 Si 0.588 3.412 27 C -0.205 4.205 28 H 0.080 0.920 29 H 0.082 0.918 30 H 0.135 0.865 31 H 0.132 0.868 32 H 0.132 0.868 33 H 0.096 0.904 34 H 0.096 0.904 35 H 0.101 0.899 36 H 0.113 0.887 37 H 0.229 0.771 38 H 0.110 0.890 39 H 0.095 0.905 40 H 0.188 0.812 41 H 0.120 0.880 42 H 0.239 0.761 43 H -0.172 1.172 44 H -0.174 1.174 45 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -2.980 -1.230 1.600 3.599 hybrid contribution 1.006 0.770 -0.306 1.303 sum -1.974 -0.460 1.293 2.405 Atomic orbital electron populations 1.23388 0.76886 1.05767 1.01906 1.86330 1.22386 1.24215 1.86583 1.18389 0.89015 0.85782 0.94456 1.17711 0.88077 0.85056 1.02866 1.86252 1.16618 1.26602 1.88846 1.22062 0.79618 0.93736 1.06248 1.22609 0.81590 0.91028 0.74092 1.90773 1.64076 1.38501 1.42923 1.86419 1.21362 1.34834 1.84051 1.23193 0.92671 0.79943 1.03380 1.22391 0.91891 0.99359 0.99351 0.87351 1.23072 0.96893 0.96368 0.99405 1.23313 0.95080 0.89862 0.89990 0.89617 1.86529 1.65975 1.40572 1.43463 1.23830 0.98931 1.00815 0.96694 1.20825 1.02369 0.88844 1.01403 1.20365 0.91800 0.83365 1.15265 1.43250 1.00970 1.02415 0.97874 1.94557 0.95608 1.93667 1.54427 1.94496 1.64686 1.24096 1.51886 1.18965 0.90718 0.95092 0.94586 1.24879 1.09145 0.94017 0.91286 1.86434 1.76753 1.44184 1.26721 0.94564 0.79002 0.87603 0.79991 1.20940 1.00773 0.89984 1.08767 0.92012 0.91761 0.86507 0.86816 0.86810 0.90373 0.90422 0.89914 0.88657 0.77124 0.89015 0.90545 0.81205 0.88038 0.76111 1.17242 1.17382 0.82501 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.28 -0.55 10.28 -34.26 -0.35 -0.90 16 3 C 0.17 0.31 6.70 -39.12 -0.26 0.04 16 4 C 0.11 0.18 6.70 -39.12 -0.26 -0.09 16 5 O -0.27 -0.61 9.45 -47.37 -0.45 -1.06 16 6 C 0.06 -0.05 5.33 36.01 0.19 0.14 16 7 C 0.47 0.81 8.03 36.01 0.29 1.10 16 8 O -0.48 -2.64 16.25 -25.48 -0.41 -3.05 16 9 O -0.35 -0.20 10.22 -39.26 -0.40 -0.60 16 10 C 0.08 0.00 5.29 37.16 0.20 0.19 16 11 C -0.11 0.17 4.01 -89.81 -0.36 -0.19 16 12 H 0.11 -0.24 8.14 -51.93 -0.42 -0.67 16 13 C -0.12 0.14 7.48 -25.92 -0.19 -0.06 16 14 C 0.08 -0.09 5.21 -25.83 -0.13 -0.22 16 15 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 16 O -0.56 -0.21 13.67 -35.23 -0.48 -0.69 16 17 C -0.16 0.22 7.48 -25.83 -0.19 0.03 16 18 C -0.11 -0.10 8.54 -39.46 -0.34 -0.44 16 19 C -0.02 -0.06 6.85 -79.94 -0.55 -0.61 16 20 N 0.04 0.15 4.45 33.96 0.15 0.30 16 21 O -0.17 -0.85 18.44 -29.46 -0.54 -1.39 16 22 O -0.13 -0.57 14.62 -35.96 -0.53 -1.10 16 23 C 0.01 0.01 5.29 -104.62 -0.55 -0.54 16 24 C -0.08 0.02 1.73 36.01 0.06 0.08 16 25 O -0.53 -0.08 11.77 -55.48 -0.65 -0.73 16 26 Si 0.69 -1.69 30.19 -169.99 -5.13 -6.82 16 27 C -0.19 -0.17 7.65 -39.46 -0.30 -0.47 16 28 H 0.06 -0.18 7.65 -51.93 -0.40 -0.58 16 29 H 0.06 -0.17 7.68 -51.93 -0.40 -0.57 16 30 H 0.12 -0.40 8.14 -51.93 -0.42 -0.82 16 31 H 0.11 -0.38 7.66 -51.93 -0.40 -0.78 16 32 H 0.11 -0.41 7.66 -51.93 -0.40 -0.81 16 33 H 0.08 -0.01 8.13 -51.93 -0.42 -0.43 16 34 H 0.08 0.03 7.87 -51.93 -0.41 -0.38 16 35 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 36 H 0.09 -0.03 8.10 -51.93 -0.42 -0.45 16 37 H 0.38 -1.38 9.12 45.56 0.42 -0.96 16 38 H 0.09 -0.04 7.92 -51.93 -0.41 -0.45 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.17 -0.25 5.85 -52.49 -0.31 -0.56 16 41 H 0.10 -0.05 6.07 -51.93 -0.32 -0.37 16 42 H 0.39 -1.84 8.74 45.56 0.40 -1.44 16 43 H -0.25 0.17 6.74 56.52 0.38 0.55 16 44 H -0.25 0.09 7.11 56.52 0.40 0.50 16 45 H 0.16 -0.09 3.13 -52.49 -0.16 -0.26 16 LS Contribution 385.60 15.07 5.81 5.81 Total: 0.00 -11.61 385.60 -8.96 -20.57 By element: Atomic # 1 Polarization: -5.71 SS G_CDS: -4.56 Total: -10.27 kcal Atomic # 6 Polarization: 1.35 SS G_CDS: -1.41 Total: -0.07 kcal Atomic # 7 Polarization: 0.15 SS G_CDS: 0.15 Total: 0.30 kcal Atomic # 8 Polarization: -5.71 SS G_CDS: -3.82 Total: -9.53 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.13 Total: -6.82 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -11.61 -8.96 -20.57 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4066032_11354868.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -139.753 kcal (2) G-P(sol) polarization free energy of solvation -11.608 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.962 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.570 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds