Wall clock time and date at job start Sat Mar 6 2021 06:11:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47127 * 2 1 4 4 C 1.52999 * 109.47317 * 119.99511 * 2 1 3 5 5 O 1.42895 * 109.47503 * 239.99913 * 2 1 3 6 6 C 1.42899 * 113.99963 * 59.99687 * 5 2 1 7 7 H 1.08997 * 112.84984 * 18.80718 * 6 5 2 8 8 C 1.53789 * 113.61207 * 150.00347 * 6 5 2 9 9 C 1.53785 * 87.07963 * 139.98392 * 8 6 5 10 10 H 1.08991 * 113.61397 * 89.19955 * 9 8 6 11 11 C 1.53006 * 113.61113 * 220.02147 * 9 8 6 12 12 O 1.45203 * 109.46598 * 184.99832 * 11 9 8 13 13 C 1.34233 * 116.99318 * 179.97438 * 12 11 9 14 14 O 1.20821 * 120.00507 * 359.97438 * 13 12 11 15 15 C 1.50700 * 119.99441 * 180.02562 * 13 12 11 16 16 F 1.39900 * 109.47217 * 299.99961 * 15 13 12 17 17 F 1.39904 * 109.47255 * 60.00179 * 15 13 12 18 18 O 1.42906 * 109.46846 * 179.97438 * 15 13 12 19 19 C 1.35905 * 116.99500 * 180.02562 * 18 15 13 20 20 C 1.38721 * 120.05981 * 359.72290 * 19 18 15 21 21 C 1.38149 * 119.94309 * 179.74309 * 20 19 18 22 22 C 1.38258 * 120.05537 * 0.51451 * 21 20 19 23 23 C 1.50703 * 119.94753 * 179.74454 * 22 21 20 24 24 O 1.42894 * 109.47275 * 245.02068 * 23 22 21 25 25 Si 1.86308 * 109.46673 * 5.01956 * 23 22 21 26 26 C 1.38271 * 120.11318 * 359.76013 * 22 21 20 27 27 C 1.38142 * 120.05121 * 359.97438 * 26 22 21 28 28 C 1.53783 * 87.08079 * 334.56393 * 9 8 6 29 29 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.46832 * 60.00321 * 1 2 3 31 31 H 1.09004 * 109.47261 * 300.00303 * 1 2 3 32 32 H 1.08993 * 109.46955 * 60.00011 * 3 2 1 33 33 H 1.09000 * 109.47050 * 179.97438 * 3 2 1 34 34 H 1.09001 * 109.47002 * 299.99574 * 3 2 1 35 35 H 1.09002 * 109.46716 * 60.00091 * 4 2 1 36 36 H 1.09000 * 109.47486 * 180.02562 * 4 2 1 37 37 H 1.09001 * 109.47362 * 300.00732 * 4 2 1 38 38 H 1.08997 * 113.61447 * 254.53073 * 8 6 5 39 39 H 1.08992 * 113.61339 * 25.35090 * 8 6 5 40 40 H 1.08998 * 109.46931 * 304.99551 * 11 9 8 41 41 H 1.08995 * 109.47370 * 65.00011 * 11 9 8 42 42 H 1.08002 * 120.02862 * 0.02562 * 20 19 18 43 43 H 1.07997 * 119.97114 * 180.23270 * 21 20 19 44 44 H 1.08996 * 109.47349 * 125.01732 * 23 22 21 45 45 H 0.96710 * 113.99797 * 59.99543 * 24 23 22 46 46 H 1.48492 * 109.99955 * 58.68398 * 25 23 22 47 47 H 1.48496 * 109.99611 * 180.02562 * 25 23 22 48 48 H 1.07993 * 119.96911 * 179.97438 * 26 22 21 49 49 H 1.08005 * 120.02409 * 179.97438 * 27 26 22 50 50 H 1.08997 * 113.61910 * 270.88880 * 28 9 8 51 51 H 1.09001 * 113.61039 * 139.98184 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7211 1.2493 5 8 2.0064 -0.6736 -1.1667 6 6 1.5847 -0.0774 -2.3950 7 1 1.2523 0.9535 -2.2729 8 6 2.5838 -0.2700 -3.5481 9 6 1.3668 -0.5005 -4.4596 10 1 0.9747 0.4142 -4.9039 11 6 1.5714 -1.6185 -5.4840 12 8 0.4218 -1.6803 -6.3688 13 6 0.4439 -2.6148 -7.3322 14 8 1.3925 -3.3563 -7.4330 15 6 -0.7140 -2.7384 -8.2887 16 9 -1.8826 -3.0188 -7.5725 17 9 -0.8722 -1.5366 -8.9873 18 8 -0.4564 -3.7964 -9.2142 19 6 -1.4091 -4.0411 -10.1521 20 6 -2.5703 -3.2826 -10.1774 21 6 -3.5347 -3.5300 -11.1352 22 6 -3.3480 -4.5395 -12.0612 23 6 -4.4043 -4.8110 -13.1013 24 8 -4.9599 -6.1101 -12.8881 25 14 -5.7506 -3.5301 -12.9680 26 6 -2.1940 -5.3007 -12.0345 27 6 -1.2243 -5.0537 -11.0822 28 6 0.6078 -0.9505 -3.2001 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3634 0.5139 0.8900 32 1 1.6767 1.9563 0.8899 33 1 3.1300 1.4425 0.0005 34 1 1.6767 1.9564 -0.8900 35 1 1.6767 -1.7488 1.2493 36 1 3.1300 -0.7207 1.2495 37 1 1.6766 -0.2073 2.1393 38 1 3.1478 0.6302 -3.7922 39 1 3.2182 -1.1489 -3.4339 40 1 2.4691 -1.4162 -6.0681 41 1 1.6822 -2.5707 -4.9653 42 1 -2.7182 -2.4964 -9.4519 43 1 -4.4372 -2.9372 -11.1577 44 1 -3.9567 -4.7657 -14.0941 45 1 -5.3762 -6.2226 -12.0224 46 1 -5.1801 -2.1722 -13.1563 47 1 -6.7988 -3.7871 -13.9881 48 1 -2.0509 -6.0889 -12.7587 49 1 -0.3232 -5.6488 -11.0615 50 1 0.7010 -2.0162 -2.9915 51 1 -0.4235 -0.5995 -3.1632 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_4146828_14598394.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:11:19 Heat of formation + Delta-G solvation = -234.567429 kcal Electronic energy + Delta-G solvation = -36053.371969 eV Core-core repulsion = 30750.404077 eV Total energy + Delta-G solvation = -5302.967892 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.167 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -50.87356 -48.87319 -42.02039 -41.36552 -40.90727 -39.42406 -38.70792 -37.71976 -37.24423 -33.97555 -32.47374 -32.08542 -30.60741 -28.93327 -28.45469 -28.29157 -26.77662 -26.37605 -24.76462 -23.86378 -22.96334 -22.49761 -21.00244 -20.89516 -20.61586 -19.78997 -19.72513 -18.80011 -18.39012 -17.82117 -17.62578 -17.46081 -16.96416 -16.74651 -16.37817 -16.29243 -16.00470 -15.94654 -15.73230 -15.57422 -15.42466 -15.33787 -15.10022 -14.91667 -14.77900 -14.63984 -14.33826 -14.23734 -14.21575 -14.13856 -13.64901 -13.59305 -13.42246 -13.32987 -13.12604 -13.03806 -12.89811 -12.73401 -12.58856 -12.43593 -12.37035 -12.20376 -12.10137 -12.01987 -11.85804 -11.73736 -11.48127 -11.30742 -10.49463 -10.43200 -10.19415 -9.59221 -5.07852 -0.00529 0.01027 0.14922 0.30444 1.24268 1.59238 1.60280 1.93415 1.93995 2.45078 2.55167 2.76493 3.14941 3.28502 3.38417 3.40226 3.49915 3.61396 3.63352 3.64367 3.71093 3.82136 3.86712 3.92859 4.00420 4.03689 4.05326 4.12434 4.17173 4.31315 4.36360 4.48751 4.50377 4.56524 4.62744 4.66079 4.69889 4.71989 4.77869 4.78898 4.82347 4.85429 4.88755 4.89676 5.01324 5.03734 5.05098 5.19707 5.24556 5.29418 5.33299 5.34970 5.81143 5.93894 6.33613 6.52444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.105 3.895 3 C -0.179 4.179 4 C -0.139 4.139 5 O -0.360 6.360 6 C 0.062 3.938 7 H 0.094 0.906 8 C -0.125 4.125 9 C -0.113 4.113 10 H 0.110 0.890 11 C 0.079 3.921 12 O -0.329 6.329 13 C 0.463 3.537 14 O -0.433 6.433 15 C 0.468 3.532 16 F -0.163 7.163 17 F -0.164 7.164 18 O -0.287 6.287 19 C 0.105 3.895 20 C -0.185 4.185 21 C -0.075 4.075 22 C -0.140 4.140 23 C -0.065 4.065 24 O -0.539 6.539 25 Si 0.683 3.317 26 C -0.056 4.056 27 C -0.123 4.123 28 C -0.150 4.150 29 H 0.065 0.935 30 H 0.058 0.942 31 H 0.066 0.934 32 H 0.068 0.932 33 H 0.065 0.935 34 H 0.059 0.941 35 H 0.064 0.936 36 H 0.063 0.937 37 H 0.071 0.929 38 H 0.081 0.919 39 H 0.096 0.904 40 H 0.085 0.915 41 H 0.085 0.915 42 H 0.138 0.862 43 H 0.136 0.864 44 H 0.116 0.884 45 H 0.380 0.620 46 H -0.256 1.256 47 H -0.253 1.253 48 H 0.140 0.860 49 H 0.142 0.858 50 H 0.093 0.907 51 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.458 2.908 3.997 5.153 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.237 4.237 4 C -0.196 4.196 5 O -0.280 6.280 6 C 0.004 3.996 7 H 0.112 0.888 8 C -0.163 4.163 9 C -0.132 4.132 10 H 0.128 0.872 11 C 0.006 3.994 12 O -0.246 6.246 13 C 0.298 3.702 14 O -0.315 6.315 15 C 0.392 3.608 16 F -0.144 7.144 17 F -0.145 7.145 18 O -0.205 6.205 19 C 0.063 3.937 20 C -0.203 4.203 21 C -0.093 4.093 22 C -0.141 4.141 23 C -0.176 4.176 24 O -0.344 6.344 25 Si 0.585 3.415 26 C -0.074 4.074 27 C -0.142 4.142 28 C -0.188 4.188 29 H 0.084 0.916 30 H 0.077 0.923 31 H 0.085 0.915 32 H 0.087 0.913 33 H 0.084 0.916 34 H 0.078 0.922 35 H 0.083 0.917 36 H 0.083 0.917 37 H 0.090 0.910 38 H 0.099 0.901 39 H 0.115 0.885 40 H 0.103 0.897 41 H 0.103 0.897 42 H 0.156 0.844 43 H 0.153 0.847 44 H 0.133 0.867 45 H 0.227 0.773 46 H -0.181 1.181 47 H -0.177 1.177 48 H 0.158 0.842 49 H 0.160 0.840 50 H 0.111 0.889 51 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -1.076 3.013 3.043 4.416 hybrid contribution 0.241 0.300 -0.223 0.445 sum -0.835 3.314 2.820 4.431 Atomic orbital electron populations 1.22472 0.95407 1.02960 1.02554 1.21553 0.93279 0.92087 0.86523 1.22473 1.02350 0.96246 1.02590 1.21772 1.02028 1.00936 0.94903 1.88040 1.73788 1.53422 1.12709 1.23544 0.95418 0.97093 0.83495 0.88798 1.23242 0.96197 1.03644 0.93210 1.22417 0.99293 0.98495 0.92949 0.87234 1.23460 0.85419 1.00651 0.89832 1.86508 1.46832 1.51228 1.39986 1.22030 0.86344 0.80500 0.81365 1.90834 1.32094 1.40034 1.68566 1.20478 0.81331 0.76820 0.82162 1.93232 1.49958 1.92997 1.78226 1.93233 1.95508 1.46239 1.79537 1.86623 1.43717 1.49116 1.41037 1.18936 0.87987 0.97001 0.89825 1.21503 0.94265 1.02117 1.02462 1.20791 0.98323 0.96579 0.93587 1.20399 0.97453 0.97652 0.98569 1.25011 0.99719 0.93788 0.99065 1.86515 1.77002 1.30613 1.40317 0.94807 0.80303 0.76931 0.89449 1.20903 0.91468 0.98103 0.96894 1.20534 1.01539 0.97488 0.94620 1.23673 0.99303 1.01729 0.94106 0.91637 0.92271 0.91493 0.91316 0.91580 0.92221 0.91733 0.91742 0.91032 0.90065 0.88526 0.89716 0.89670 0.84409 0.84710 0.86712 0.77278 1.18120 1.17739 0.84174 0.84045 0.88861 0.90599 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.20 8.38 37.16 0.31 0.51 16 2 C 0.10 -0.05 1.11 -90.62 -0.10 -0.15 16 3 C -0.18 0.23 8.38 37.16 0.31 0.55 16 4 C -0.14 0.10 8.84 37.16 0.33 0.43 16 5 O -0.36 -0.32 10.00 -35.23 -0.35 -0.67 16 6 C 0.06 -0.07 2.82 -25.91 -0.07 -0.14 16 7 H 0.09 -0.18 5.54 -51.93 -0.29 -0.47 16 8 C -0.13 0.24 7.47 -25.91 -0.19 0.04 16 9 C -0.11 0.22 4.02 -89.80 -0.36 -0.14 16 10 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 11 C 0.08 -0.06 5.30 37.16 0.20 0.13 16 12 O -0.33 -0.29 10.22 -39.26 -0.40 -0.69 16 13 C 0.46 1.07 7.47 36.01 0.27 1.34 16 14 O -0.43 -1.87 16.25 -25.47 -0.41 -2.28 16 15 C 0.47 0.97 2.16 36.01 0.08 1.05 16 16 F -0.16 -0.25 15.28 2.25 0.03 -0.22 16 17 F -0.16 -0.29 15.31 2.25 0.03 -0.26 16 18 O -0.29 -0.88 9.60 -39.39 -0.38 -1.26 16 19 C 0.11 0.23 6.48 -39.22 -0.25 -0.02 16 20 C -0.19 -0.21 8.26 -39.44 -0.33 -0.54 16 21 C -0.08 0.01 8.66 -39.61 -0.34 -0.33 16 22 C -0.14 0.00 5.35 -104.60 -0.56 -0.56 16 23 C -0.06 0.04 2.80 36.01 0.10 0.14 16 24 O -0.54 0.07 12.83 -35.23 -0.45 -0.38 16 25 Si 0.68 -0.83 29.80 -169.99 -5.07 -5.90 16 26 C -0.06 -0.02 9.68 -39.60 -0.38 -0.40 16 27 C -0.12 -0.13 9.99 -39.43 -0.39 -0.52 16 28 C -0.15 0.20 7.46 -25.92 -0.19 0.01 16 29 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.06 -0.08 7.02 -51.93 -0.36 -0.45 16 31 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 34 H 0.06 -0.10 6.24 -51.93 -0.32 -0.43 16 35 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 36 H 0.06 -0.02 8.14 -51.93 -0.42 -0.45 16 37 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 39 H 0.10 -0.14 8.10 -51.93 -0.42 -0.56 16 40 H 0.08 -0.12 8.13 -51.93 -0.42 -0.54 16 41 H 0.09 -0.08 7.84 -51.93 -0.41 -0.48 16 42 H 0.14 0.07 5.10 -52.49 -0.27 -0.20 16 43 H 0.14 -0.32 4.90 -52.49 -0.26 -0.57 16 44 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 45 H 0.38 -1.48 8.70 45.56 0.40 -1.09 16 46 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 47 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 48 H 0.14 -0.13 8.06 -52.49 -0.42 -0.55 16 49 H 0.14 -0.02 8.06 -52.48 -0.42 -0.45 16 50 H 0.09 -0.06 7.90 -51.93 -0.41 -0.47 16 51 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 LS Contribution 423.11 15.07 6.38 6.38 Total: 0.00 -6.33 423.11 -9.65 -15.98 By element: Atomic # 1 Polarization: -4.63 SS G_CDS: -7.45 Total: -12.08 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: -1.59 Total: 1.39 kcal Atomic # 8 Polarization: -3.29 SS G_CDS: -2.00 Total: -5.29 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.07 Total: -0.48 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.07 Total: -5.90 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -6.33 -9.65 -15.98 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4146828_14598394.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -218.583 kcal (2) G-P(sol) polarization free energy of solvation -6.331 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -224.914 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.653 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.984 kcal (6) G-S(sol) free energy of system = (1) + (5) -234.567 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds