Wall clock time and date at job start Sat Mar 6 2021 07:04:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86289 * 109.47570 * 2 1 4 4 C 1.50705 * 109.46728 * 120.00313 * 2 1 3 5 5 C 1.38270 * 119.93813 * 245.27253 * 4 2 1 6 6 C 1.38147 * 120.05177 * 180.24023 * 5 4 2 7 7 C 1.38736 * 119.94540 * 359.46077 * 6 5 4 8 8 O 1.35892 * 120.05957 * 180.26040 * 7 6 5 9 9 C 1.42899 * 117.00396 * 180.02562 * 8 7 6 10 10 F 1.39902 * 109.47225 * 300.00123 * 9 8 7 11 11 F 1.39908 * 109.46951 * 59.99969 * 9 8 7 12 12 C 1.50699 * 109.47210 * 179.97438 * 9 8 7 13 13 O 1.20818 * 120.00045 * 359.97438 * 12 9 8 14 14 O 1.34233 * 119.99830 * 180.02562 * 12 9 8 15 15 C 1.45197 * 116.99870 * 180.02562 * 14 12 9 16 16 C 1.53000 * 109.46905 * 179.97438 * 15 14 12 17 17 H 1.09002 * 109.47654 * 55.00034 * 16 15 14 18 18 C 1.53004 * 109.47189 * 174.99803 * 16 15 14 19 19 C 1.53000 * 109.47160 * 179.97438 * 18 16 15 20 20 C 1.52992 * 109.47348 * 300.00203 * 19 18 16 21 21 H 1.09002 * 109.47133 * 299.99836 * 20 19 18 22 22 O 1.42909 * 109.47118 * 180.02562 * 20 19 18 23 23 C 1.52996 * 109.47287 * 60.00007 * 20 19 18 24 24 C 1.53000 * 109.46950 * 299.99859 * 23 20 19 25 25 C 1.38740 * 119.88595 * 0.28283 * 7 6 5 26 26 C 1.38146 * 119.94197 * 359.97438 * 25 7 6 27 27 H 0.96703 * 113.99810 * 299.99988 * 1 2 3 28 28 H 1.08997 * 109.46673 * 239.99524 * 2 1 3 29 29 H 1.48498 * 110.00176 * 300.00193 * 3 2 1 30 30 H 1.48507 * 110.00293 * 61.31845 * 3 2 1 31 31 H 1.07995 * 119.98059 * 359.97438 * 5 4 2 32 32 H 1.08002 * 120.03108 * 179.74549 * 6 5 4 33 33 H 1.08996 * 109.47264 * 299.99179 * 15 14 12 34 34 H 1.09001 * 109.47362 * 60.00116 * 15 14 12 35 35 H 1.08997 * 109.47011 * 300.00067 * 18 16 15 36 36 H 1.09002 * 109.47065 * 59.99924 * 18 16 15 37 37 H 1.08996 * 109.46701 * 60.00594 * 19 18 16 38 38 H 1.09002 * 109.46616 * 180.02562 * 19 18 16 39 39 H 0.96700 * 114.00034 * 180.02562 * 22 20 19 40 40 H 1.09002 * 109.47173 * 59.99854 * 23 20 19 41 41 H 1.08997 * 109.47142 * 179.97438 * 23 20 19 42 42 H 1.08996 * 109.47486 * 299.99361 * 24 23 20 43 43 H 1.09009 * 109.46981 * 179.97438 * 24 23 20 44 44 H 1.07993 * 120.02463 * 180.02562 * 25 7 6 45 45 H 1.08006 * 119.96944 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9312 -0.7105 1.2305 5 6 2.6338 -0.0098 2.1935 6 6 3.0995 -0.6598 3.3200 7 6 2.8522 -2.0144 3.4899 8 8 3.3047 -2.6549 4.5997 9 6 3.0137 -4.0498 4.7078 10 9 1.6275 -4.2386 4.7038 11 9 3.5801 -4.7297 3.6241 12 6 3.5904 -4.5852 5.9930 13 8 4.1896 -3.8481 6.7395 14 8 3.4392 -5.8813 6.3078 15 6 4.0203 -6.3272 7.5615 16 6 3.7474 -7.8211 7.7472 17 1 4.1147 -8.3684 6.8790 18 6 4.4645 -8.3182 9.0041 19 6 4.1911 -9.8121 9.1902 20 6 2.6855 -10.0404 9.3380 21 1 2.3185 -9.4930 10.2062 22 8 2.4302 -11.4357 9.5124 23 6 1.9684 -9.5434 8.0812 24 6 2.2418 -8.0496 7.8952 25 6 2.1425 -2.7139 2.5247 26 6 1.6835 -2.0604 1.3975 27 1 -0.3933 0.4417 0.7651 28 1 1.7922 -0.5139 -0.8899 29 1 1.5616 2.4678 -1.2084 30 1 1.5880 2.4585 1.2243 31 1 2.8223 1.0455 2.0629 32 1 3.6518 -0.1131 4.0700 33 1 5.0962 -6.1534 7.5455 34 1 3.5747 -5.7715 8.3866 35 1 5.5371 -8.1551 8.8989 36 1 4.0972 -7.7711 9.8723 37 1 4.5581 -10.3594 8.3220 38 1 4.7016 -10.1660 10.0858 39 1 1.4937 -11.6546 9.6125 40 1 2.3354 -10.0908 7.2130 41 1 0.8959 -9.7065 8.1864 42 1 1.8747 -7.5021 8.7633 43 1 1.7312 -7.6956 6.9995 44 1 1.9483 -3.7683 2.6549 45 1 1.1312 -2.6047 0.6456 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_4146828_16737258.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:04:54 Heat of formation + Delta-G solvation = -269.941405 kcal Electronic energy + Delta-G solvation = -32315.919402 eV Core-core repulsion = 27322.492817 eV Total energy + Delta-G solvation = -4993.426585 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.136 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -51.02167 -49.02393 -42.14695 -41.41900 -40.15368 -39.46891 -38.27049 -37.39222 -36.70148 -32.43821 -32.29254 -32.06975 -31.84480 -29.61979 -26.93496 -26.17989 -24.66057 -23.86755 -23.18606 -22.57205 -22.30200 -21.00799 -20.76010 -19.93759 -19.89485 -18.83377 -18.45669 -18.20166 -17.77132 -17.71659 -16.90040 -16.56427 -16.40854 -16.24144 -16.11675 -15.90233 -15.53162 -15.48477 -15.40094 -15.33300 -15.24893 -14.93939 -14.80445 -14.54489 -14.44454 -14.27578 -14.06616 -13.75147 -13.49106 -13.25590 -13.18442 -13.07991 -12.71662 -12.54179 -12.32653 -12.23586 -12.16377 -11.98931 -11.74511 -11.67966 -11.62491 -11.12239 -10.72941 -10.63583 -10.21180 -9.65187 -4.90551 -0.11237 -0.06223 0.13190 0.16292 1.30695 1.48174 1.60624 1.81438 1.97524 2.41552 2.61463 3.00455 3.19846 3.40534 3.52816 3.56686 3.58231 3.63707 3.67626 3.70751 3.96739 4.04898 4.07466 4.13993 4.16315 4.28248 4.30574 4.35950 4.40953 4.43755 4.47342 4.57055 4.68705 4.80290 4.83358 4.89912 4.94975 5.04691 5.05170 5.06646 5.13824 5.15295 5.26570 5.28561 5.32107 5.40827 5.78335 5.81764 6.47953 6.85138 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.081 4.081 3 Si 0.768 3.232 4 C -0.135 4.135 5 C -0.079 4.079 6 C -0.123 4.123 7 C 0.083 3.917 8 O -0.298 6.298 9 C 0.468 3.532 10 F -0.164 7.164 11 F -0.163 7.163 12 C 0.470 3.530 13 O -0.455 6.455 14 O -0.328 6.328 15 C 0.064 3.936 16 C -0.084 4.084 17 H 0.087 0.913 18 C -0.104 4.104 19 C -0.113 4.113 20 C 0.099 3.901 21 H 0.063 0.937 22 O -0.591 6.591 23 C -0.147 4.147 24 C -0.114 4.114 25 C -0.198 4.198 26 C -0.059 4.059 27 H 0.387 0.613 28 H 0.128 0.872 29 H -0.304 1.304 30 H -0.277 1.277 31 H 0.162 0.838 32 H 0.157 0.843 33 H 0.092 0.908 34 H 0.090 0.910 35 H 0.086 0.914 36 H 0.080 0.920 37 H 0.064 0.936 38 H 0.071 0.929 39 H 0.393 0.607 40 H 0.063 0.937 41 H 0.075 0.925 42 H 0.074 0.926 43 H 0.068 0.932 44 H 0.134 0.866 45 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.089 0.231 1.252 1.676 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.190 4.190 3 Si 0.673 3.327 4 C -0.136 4.136 5 C -0.096 4.096 6 C -0.141 4.141 7 C 0.041 3.959 8 O -0.216 6.216 9 C 0.393 3.607 10 F -0.146 7.146 11 F -0.145 7.145 12 C 0.306 3.694 13 O -0.339 6.339 14 O -0.244 6.244 15 C -0.008 4.008 16 C -0.103 4.103 17 H 0.105 0.895 18 C -0.141 4.141 19 C -0.151 4.151 20 C 0.041 3.959 21 H 0.081 0.919 22 O -0.399 6.399 23 C -0.185 4.185 24 C -0.152 4.152 25 C -0.217 4.217 26 C -0.077 4.077 27 H 0.236 0.764 28 H 0.146 0.854 29 H -0.233 1.233 30 H -0.203 1.203 31 H 0.179 0.821 32 H 0.175 0.825 33 H 0.110 0.890 34 H 0.108 0.892 35 H 0.104 0.896 36 H 0.099 0.901 37 H 0.082 0.918 38 H 0.089 0.911 39 H 0.243 0.757 40 H 0.082 0.918 41 H 0.093 0.907 42 H 0.092 0.908 43 H 0.087 0.913 44 H 0.152 0.848 45 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 1.898 0.952 1.067 2.376 hybrid contribution -1.956 -0.547 0.348 2.061 sum -0.058 0.405 1.415 1.473 Atomic orbital electron populations 1.86586 1.18459 1.80395 1.50212 1.25238 0.83450 1.11965 0.98307 0.94049 0.90212 0.71796 0.76619 1.20439 1.00784 0.94654 0.97701 1.21161 0.95828 1.00714 0.91887 1.20666 1.03036 0.90184 1.00212 1.19223 0.97724 0.93355 0.85609 1.86586 1.74287 1.18583 1.42157 1.20465 0.76166 0.80585 0.83517 1.93227 1.30163 1.94782 1.96398 1.93232 1.84492 1.80073 1.56670 1.22007 0.78935 0.82874 0.85628 1.90815 1.35937 1.58579 1.48538 1.86504 1.71321 1.23119 1.43457 1.23752 0.99607 0.96330 0.81075 1.21291 0.97211 0.91517 1.00272 0.89496 1.21444 1.01380 0.94696 0.96626 1.21457 0.94447 0.96347 1.02814 1.21936 0.96031 0.81398 0.96550 0.91923 1.86484 1.32453 1.25123 1.95879 1.22211 1.01158 0.96329 0.98763 1.21564 0.94837 0.95918 1.02859 1.21675 1.02627 1.01184 0.96167 1.20980 0.96483 0.94080 0.96144 0.76394 0.85444 1.23250 1.20305 0.82129 0.82519 0.89022 0.89160 0.89586 0.90124 0.91757 0.91075 0.75746 0.91820 0.90666 0.90765 0.91297 0.84827 0.84033 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.72 12.83 -148.98 -1.91 -2.63 16 2 C -0.08 0.17 2.80 71.24 0.20 0.37 16 3 Si 0.77 -2.86 29.89 68.60 2.05 -0.81 16 4 C -0.14 0.12 5.35 -19.85 -0.11 0.02 16 5 C -0.08 0.18 8.66 22.26 0.19 0.37 16 6 C -0.12 -0.05 9.99 22.37 0.22 0.17 16 7 C 0.08 0.36 6.48 22.51 0.15 0.51 16 8 O -0.30 -1.89 9.60 -73.25 -0.70 -2.60 16 9 C 0.47 2.19 2.16 71.24 0.15 2.34 16 10 F -0.16 -0.71 15.29 44.97 0.69 -0.02 16 11 F -0.16 -0.70 15.29 44.97 0.69 -0.01 16 12 C 0.47 2.09 7.47 71.24 0.53 2.62 16 13 O -0.45 -3.72 16.25 28.42 0.46 -3.25 16 14 O -0.33 -0.40 9.76 -51.44 -0.50 -0.90 16 15 C 0.06 -0.20 4.84 71.98 0.35 0.15 16 16 C -0.08 0.39 2.44 -10.79 -0.03 0.36 16 17 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 18 C -0.10 0.61 5.20 30.60 0.16 0.77 16 19 C -0.11 0.26 5.57 30.59 0.17 0.43 16 20 C 0.10 -0.20 3.47 30.59 0.11 -0.10 16 21 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 22 O -0.59 -0.69 13.32 -148.98 -1.98 -2.67 16 23 C -0.15 0.50 5.55 30.59 0.17 0.67 16 24 C -0.11 0.47 5.10 30.59 0.16 0.62 16 25 C -0.20 -0.69 8.26 22.37 0.18 -0.50 16 26 C -0.06 -0.07 9.68 22.25 0.22 0.14 16 27 H 0.39 -1.63 8.70 -74.06 -0.64 -2.28 16 28 H 0.13 -0.48 7.96 -2.39 -0.02 -0.50 16 29 H -0.30 -1.38 7.11 99.48 0.71 -0.67 16 30 H -0.28 0.19 7.00 99.48 0.70 0.89 16 31 H 0.16 -1.14 4.83 -2.91 -0.01 -1.16 16 32 H 0.16 -0.45 8.06 -2.91 -0.02 -0.48 16 33 H 0.09 -0.39 8.13 -2.39 -0.02 -0.41 16 34 H 0.09 -0.38 8.13 -2.39 -0.02 -0.40 16 35 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 36 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 37 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 38 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 39 H 0.39 -2.52 9.08 -74.06 -0.67 -3.20 16 40 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 41 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 42 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 43 H 0.07 -0.17 7.82 -2.38 -0.02 -0.19 16 44 H 0.13 0.42 5.10 -2.91 -0.01 0.41 16 45 H 0.14 -0.08 8.06 -2.91 -0.02 -0.10 16 Total: 0.00 -16.30 378.51 1.37 -14.93 By element: Atomic # 1 Polarization: -10.73 SS G_CDS: -0.24 Total: -10.97 kcal Atomic # 6 Polarization: 6.13 SS G_CDS: 2.82 Total: 8.95 kcal Atomic # 8 Polarization: -7.42 SS G_CDS: -4.64 Total: -12.06 kcal Atomic # 9 Polarization: -1.41 SS G_CDS: 1.38 Total: -0.03 kcal Atomic # 14 Polarization: -2.86 SS G_CDS: 2.05 Total: -0.81 kcal Total: -16.30 1.37 -14.93 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4146828_16737258.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -255.012 kcal (2) G-P(sol) polarization free energy of solvation -16.298 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -271.311 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.929 kcal (6) G-S(sol) free energy of system = (1) + (5) -269.941 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds