Wall clock time and date at job start Sat Mar 6 2021 07:27:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42898 * 114.00424 * 2 1 4 4 C 1.52999 * 112.85065 * 294.01696 * 3 2 1 5 5 F 1.39895 * 109.47296 * 195.88865 * 4 3 2 6 6 F 1.39899 * 109.46666 * 315.88947 * 4 3 2 7 7 F 1.39898 * 109.47091 * 75.88400 * 4 3 2 8 8 C 1.53775 * 113.69341 * 162.74335 * 3 2 1 9 9 C 1.53781 * 87.08471 * 270.87846 * 8 3 2 10 10 H 1.09002 * 113.69136 * 220.01173 * 9 8 3 11 11 C 1.52996 * 113.61999 * 89.11329 * 9 8 3 12 12 O 1.45200 * 109.46920 * 87.50342 * 11 9 8 13 13 C 1.34229 * 116.99916 * 180.02562 * 12 11 9 14 14 O 1.20825 * 120.00011 * 359.97438 * 13 12 11 15 15 C 1.50706 * 120.00100 * 180.02562 * 13 12 11 16 16 F 1.39901 * 109.46669 * 300.00143 * 15 13 12 17 17 F 1.39899 * 109.46913 * 59.99548 * 15 13 12 18 18 O 1.42897 * 109.47261 * 179.97438 * 15 13 12 19 19 C 1.35892 * 117.00290 * 179.97438 * 18 15 13 20 20 C 1.38737 * 120.05173 * 359.73387 * 19 18 15 21 21 C 1.38149 * 119.94263 * 179.69807 * 20 19 18 22 22 C 1.38264 * 120.05515 * 0.59310 * 21 20 19 23 23 C 1.50697 * 119.94620 * 179.70416 * 22 21 20 24 24 O 1.42898 * 109.47325 * 119.97661 * 23 22 21 25 25 Si 1.86300 * 109.47042 * 359.97438 * 23 22 21 26 26 C 1.38269 * 120.11118 * 359.67923 * 22 21 20 27 27 C 1.38144 * 120.05449 * 0.02562 * 26 22 21 28 28 C 1.53780 * 113.61092 * 65.20672 * 3 2 1 29 29 H 1.08997 * 109.47269 * 304.84171 * 1 2 3 30 30 H 1.09005 * 109.47074 * 64.84123 * 1 2 3 31 31 H 1.08998 * 109.47734 * 184.84028 * 1 2 3 32 32 H 1.08999 * 113.61773 * 156.32570 * 8 3 2 33 33 H 1.09000 * 113.61499 * 25.42462 * 8 3 2 34 34 H 1.08996 * 109.47509 * 207.50954 * 11 9 8 35 35 H 1.09005 * 109.46679 * 327.50599 * 11 9 8 36 36 H 1.07999 * 120.02908 * 359.97438 * 20 19 18 37 37 H 1.07998 * 119.97395 * 180.31493 * 21 20 19 38 38 H 1.09004 * 109.47262 * 239.97445 * 23 22 21 39 39 H 0.96701 * 113.99995 * 180.02562 * 24 23 22 40 40 H 1.48497 * 109.99960 * 298.68047 * 25 23 22 41 41 H 1.48494 * 109.99994 * 59.99987 * 25 23 22 42 42 H 1.07999 * 119.97486 * 180.02562 * 26 22 21 43 43 H 1.07999 * 120.02887 * 180.02562 * 27 26 22 44 44 H 1.09001 * 113.61686 * 334.65989 * 28 3 2 45 45 H 1.09000 * 113.61705 * 203.74787 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7278 2.0816 -1.2879 5 9 2.6016 3.1703 -1.3774 6 9 1.9160 1.2406 -2.3899 7 9 0.4073 2.5434 -1.2739 8 6 3.4901 1.3228 0.4177 9 6 2.9982 1.4839 1.8658 10 1 3.5937 2.1807 2.4557 11 6 2.7566 0.1540 2.5826 12 8 3.9919 -0.2943 3.2001 13 6 3.9505 -1.4548 3.8733 14 8 2.9161 -2.0752 3.9447 15 6 5.1938 -1.9835 4.5411 16 9 6.1894 -2.1859 3.5793 17 9 5.6429 -1.0583 5.4895 18 8 4.8969 -3.2224 5.1882 19 6 5.9173 -3.8369 5.8424 20 6 7.1798 -3.2620 5.8563 21 6 8.2140 -3.8854 6.5273 22 6 7.9946 -5.0875 7.1742 23 6 9.1262 -5.7689 7.8997 24 8 8.7905 -5.9083 9.2817 25 14 10.6741 -4.7451 7.7368 26 6 6.7386 -5.6654 7.1570 27 6 5.6996 -5.0428 6.4926 28 6 1.7211 2.1084 1.2792 29 1 -0.3634 0.5871 0.8434 30 1 -0.3633 0.4369 -0.9302 31 1 -0.3634 -1.0239 0.0867 32 1 4.0391 2.1873 0.0444 33 1 4.0067 0.3807 0.2344 34 1 1.9945 0.2882 3.3502 35 1 2.4192 -0.5910 1.8620 36 1 7.3529 -2.3255 5.3469 37 1 9.1958 -3.4358 6.5428 38 1 9.2950 -6.7544 7.4657 39 1 9.4753 -6.3394 9.8112 40 1 11.0516 -4.6194 6.3061 41 1 10.4569 -3.3990 8.3249 42 1 6.5696 -6.6042 7.6634 43 1 4.7187 -5.4944 6.4798 44 1 0.8095 1.8005 1.7914 45 1 1.7864 3.1877 1.1414 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_4146828_17321610.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:27:17 Heat of formation + Delta-G solvation = -357.758829 kcal Electronic energy + Delta-G solvation = -40628.966255 eV Core-core repulsion = 34223.369694 eV Total energy + Delta-G solvation = -6405.596561 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 413.107 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -51.28366 -51.09417 -49.09478 -48.81480 -48.75732 -42.29192 -41.55115 -41.24793 -39.46557 -38.28756 -37.31141 -37.08309 -32.69822 -32.27253 -31.21195 -29.56577 -28.25098 -27.44681 -26.82672 -26.30505 -24.81832 -23.54417 -23.10053 -22.55023 -20.99039 -20.79249 -20.02145 -19.97085 -19.75113 -19.57399 -19.30523 -18.80476 -18.36993 -17.95508 -17.79669 -17.25107 -17.16826 -16.58749 -16.54404 -16.40105 -16.20155 -15.85726 -15.80333 -15.70053 -15.63040 -15.59143 -15.40043 -15.32680 -15.27044 -15.15809 -14.98220 -14.90510 -14.84986 -14.58389 -14.50538 -14.31922 -14.11961 -13.96174 -13.74408 -13.47173 -13.28771 -13.23554 -12.87956 -12.65027 -12.54284 -12.33471 -12.21786 -12.11293 -11.96257 -11.94973 -11.68476 -10.87958 -10.37531 -10.33047 -9.70167 -4.95933 -0.19437 -0.15880 -0.01949 0.08934 1.29214 1.39596 1.49604 1.63003 1.73339 1.96085 2.03228 2.29027 2.45754 2.55372 2.58674 2.84648 2.93189 3.21204 3.24997 3.30401 3.38054 3.45488 3.50759 3.55343 3.81547 3.91111 4.05682 4.08750 4.10816 4.18141 4.24192 4.24714 4.32278 4.45778 4.46093 4.50798 4.62098 4.66253 4.67120 4.74682 4.76283 4.78482 4.86817 4.96737 5.18621 5.22952 5.65329 5.65794 5.76218 6.92016 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.004 3.996 2 O -0.349 6.349 3 C 0.030 3.970 4 C 0.434 3.566 5 F -0.175 7.175 6 F -0.189 7.189 7 F -0.184 7.184 8 C -0.116 4.116 9 C -0.095 4.095 10 H 0.128 0.872 11 C 0.070 3.930 12 O -0.325 6.325 13 C 0.472 3.528 14 O -0.452 6.452 15 C 0.467 3.533 16 F -0.164 7.164 17 F -0.164 7.164 18 O -0.296 6.296 19 C 0.085 3.915 20 C -0.193 4.193 21 C -0.100 4.100 22 C -0.106 4.106 23 C -0.072 4.072 24 O -0.562 6.562 25 Si 0.768 3.232 26 C -0.053 4.053 27 C -0.124 4.124 28 C -0.131 4.131 29 H 0.072 0.928 30 H 0.046 0.954 31 H 0.110 0.890 32 H 0.131 0.869 33 H 0.091 0.909 34 H 0.098 0.902 35 H 0.093 0.907 36 H 0.138 0.862 37 H 0.127 0.873 38 H 0.104 0.896 39 H 0.405 0.595 40 H -0.288 1.288 41 H -0.299 1.299 42 H 0.165 0.835 43 H 0.159 0.841 44 H 0.108 0.892 45 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.298 -1.029 3.330 4.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 O -0.267 6.267 3 C -0.012 4.012 4 C 0.379 3.621 5 F -0.156 7.156 6 F -0.170 7.170 7 F -0.166 7.166 8 C -0.153 4.153 9 C -0.113 4.113 10 H 0.146 0.854 11 C -0.002 4.002 12 O -0.241 6.241 13 C 0.307 3.693 14 O -0.336 6.336 15 C 0.391 3.609 16 F -0.145 7.145 17 F -0.145 7.145 18 O -0.214 6.214 19 C 0.043 3.957 20 C -0.211 4.211 21 C -0.118 4.118 22 C -0.107 4.107 23 C -0.183 4.183 24 O -0.372 6.372 25 Si 0.675 3.325 26 C -0.070 4.070 27 C -0.142 4.142 28 C -0.168 4.168 29 H 0.091 0.909 30 H 0.065 0.935 31 H 0.128 0.872 32 H 0.149 0.851 33 H 0.110 0.890 34 H 0.116 0.884 35 H 0.111 0.889 36 H 0.155 0.845 37 H 0.144 0.856 38 H 0.121 0.879 39 H 0.257 0.743 40 H -0.216 1.216 41 H -0.227 1.227 42 H 0.182 0.818 43 H 0.177 0.823 44 H 0.127 0.873 45 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 1.700 -0.387 2.741 3.249 hybrid contribution -0.709 0.576 -1.003 1.356 sum 0.992 0.188 1.739 2.010 Atomic orbital electron populations 1.23286 0.78609 1.05302 1.01895 1.88070 1.22197 1.22542 1.93859 1.24266 1.00714 0.86341 0.89927 1.21467 0.74177 0.78698 0.87744 1.93175 1.69329 1.56489 1.96624 1.93190 1.94867 1.71328 1.57632 1.93186 1.36811 1.89713 1.96848 1.23395 0.90601 1.06144 0.95110 1.22088 0.98747 0.95203 0.95294 0.85359 1.23571 0.82079 0.96950 0.97556 1.86462 1.41637 1.34556 1.61442 1.21912 0.87539 0.81411 0.78418 1.90820 1.30493 1.57259 1.55019 1.20515 0.82489 0.79633 0.78243 1.93228 1.63000 1.94533 1.63742 1.93229 1.89782 1.66386 1.65109 1.86588 1.36407 1.32718 1.65657 1.19130 0.86075 0.94509 0.96028 1.21517 0.92437 1.02498 1.04674 1.20820 0.98348 0.94957 0.97678 1.19821 0.96507 0.95048 0.99296 1.24703 1.02528 1.06300 0.84726 1.86432 1.48859 1.84185 1.17764 0.94420 0.80318 0.78120 0.79666 1.21173 0.90246 1.00341 0.95286 1.20834 1.02196 0.92562 0.98609 1.23661 0.99469 1.01838 0.91820 0.90913 0.93542 0.87160 0.85062 0.89020 0.88416 0.88885 0.84458 0.85609 0.87854 0.74306 1.21574 1.22704 0.81788 0.82320 0.87331 0.85048 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.30 113.37 1.17 1.15 16 2 O -0.35 -0.09 8.37 -148.98 -1.25 -1.34 16 3 C 0.03 -0.07 0.84 -10.27 -0.01 -0.08 16 4 C 0.43 0.63 2.52 71.98 0.18 0.81 16 5 F -0.17 -0.19 15.81 44.97 0.71 0.52 16 6 F -0.19 -1.14 17.10 44.97 0.77 -0.37 16 7 F -0.18 -0.37 15.39 44.97 0.69 0.33 16 8 C -0.12 0.49 6.89 31.12 0.21 0.71 16 9 C -0.10 0.61 4.21 -10.27 -0.04 0.57 16 10 H 0.13 -1.17 8.14 -2.39 -0.02 -1.19 16 11 C 0.07 -0.16 5.05 71.98 0.36 0.20 16 12 O -0.33 -0.58 10.22 -51.41 -0.53 -1.10 16 13 C 0.47 2.70 7.47 71.24 0.53 3.23 16 14 O -0.45 -4.28 16.25 28.40 0.46 -3.82 16 15 C 0.47 3.05 2.16 71.24 0.15 3.20 16 16 F -0.16 -1.01 15.27 44.97 0.69 -0.32 16 17 F -0.16 -1.00 15.31 44.97 0.69 -0.31 16 18 O -0.30 -2.59 9.60 -73.26 -0.70 -3.29 16 19 C 0.08 0.67 6.48 22.51 0.15 0.81 16 20 C -0.19 -1.48 8.26 22.37 0.18 -1.30 16 21 C -0.10 -0.66 8.66 22.25 0.19 -0.47 16 22 C -0.11 -0.44 5.42 -19.85 -0.11 -0.54 16 23 C -0.07 0.14 2.81 71.24 0.20 0.35 16 24 O -0.56 1.18 12.74 -148.98 -1.90 -0.72 16 25 Si 0.77 -1.86 29.78 68.60 2.04 0.18 16 26 C -0.05 -0.13 9.60 22.25 0.21 0.08 16 27 C -0.12 -0.53 9.99 22.36 0.22 -0.31 16 28 C -0.13 0.99 6.51 31.12 0.20 1.19 16 29 H 0.07 -0.50 6.55 -2.39 -0.02 -0.51 16 30 H 0.05 -0.07 6.69 -2.38 -0.02 -0.09 16 31 H 0.11 -0.55 8.14 -2.39 -0.02 -0.57 16 32 H 0.13 -0.87 7.02 -2.39 -0.02 -0.89 16 33 H 0.09 -0.22 8.10 -2.39 -0.02 -0.24 16 34 H 0.10 -0.43 8.13 -2.39 -0.02 -0.45 16 35 H 0.09 -0.01 6.12 -2.38 -0.01 -0.03 16 36 H 0.14 0.90 5.10 -2.91 -0.01 0.88 16 37 H 0.13 0.68 4.87 -2.91 -0.01 0.67 16 38 H 0.10 -0.71 7.96 -2.39 -0.02 -0.73 16 39 H 0.41 -5.09 8.74 -74.06 -0.65 -5.74 16 40 H -0.29 -0.90 7.11 99.48 0.71 -0.19 16 41 H -0.30 -1.70 7.11 99.48 0.71 -0.99 16 42 H 0.16 -0.37 8.06 -2.91 -0.02 -0.39 16 43 H 0.16 0.07 8.06 -2.91 -0.02 0.05 16 44 H 0.11 -1.04 6.63 -2.39 -0.02 -1.05 16 45 H 0.13 -1.32 8.04 -2.39 -0.02 -1.34 16 Total: 0.00 -19.42 393.60 5.99 -13.43 By element: Atomic # 1 Polarization: -13.29 SS G_CDS: 0.50 Total: -12.80 kcal Atomic # 6 Polarization: 5.80 SS G_CDS: 3.82 Total: 9.61 kcal Atomic # 8 Polarization: -6.36 SS G_CDS: -3.91 Total: -10.28 kcal Atomic # 9 Polarization: -3.70 SS G_CDS: 3.55 Total: -0.15 kcal Atomic # 14 Polarization: -1.86 SS G_CDS: 2.04 Total: 0.18 kcal Total: -19.42 5.99 -13.43 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4146828_17321610.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -344.327 kcal (2) G-P(sol) polarization free energy of solvation -19.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -363.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.990 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.431 kcal (6) G-S(sol) free energy of system = (1) + (5) -357.759 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds