Wall clock time and date at job start Sat Mar 6 2021 08:54:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86301 * 109.47095 * 2 1 4 4 C 1.86301 * 109.46852 * 240.00246 * 2 1 3 5 5 C 1.86300 * 109.46978 * 120.00342 * 2 1 3 6 6 O 1.45192 * 109.47474 * 60.00020 * 5 2 1 7 7 C 1.34225 * 117.00088 * 74.99676 * 6 5 2 8 8 O 1.20825 * 120.00047 * 0.02562 * 7 6 5 9 9 C 1.50703 * 119.99932 * 180.02562 * 7 6 5 10 10 F 1.39900 * 109.47515 * 60.00084 * 9 7 6 11 11 F 1.39897 * 109.47274 * 299.99990 * 9 7 6 12 12 O 1.42905 * 109.47264 * 180.02562 * 9 7 6 13 13 C 1.35897 * 117.00093 * 179.97438 * 12 9 7 14 14 C 1.38737 * 120.05547 * 359.72645 * 13 12 9 15 15 C 1.38149 * 119.94020 * 179.74326 * 14 13 12 16 16 C 1.38269 * 120.05599 * 0.51033 * 15 14 13 17 17 C 1.50701 * 119.94263 * 179.74419 * 16 15 14 18 18 O 1.42895 * 109.47045 * 245.01911 * 17 16 15 19 19 Si 1.86303 * 109.46953 * 5.02003 * 17 16 15 20 20 H 1.48501 * 109.46717 * 179.97438 * 19 17 16 21 21 H 1.48500 * 109.47229 * 299.99757 * 19 17 16 22 22 H 1.48498 * 109.47146 * 60.00114 * 19 17 16 23 23 C 1.38265 * 120.10911 * 359.76477 * 16 15 14 24 24 C 1.38141 * 120.06229 * 359.97438 * 23 16 15 25 25 H 1.09010 * 109.46696 * 299.99763 * 1 2 3 26 26 H 1.08992 * 109.47237 * 59.99608 * 1 2 3 27 27 H 1.08996 * 109.47345 * 179.97438 * 1 2 3 28 28 H 1.09002 * 109.46902 * 179.97438 * 3 2 1 29 29 H 1.08992 * 109.47398 * 300.00293 * 3 2 1 30 30 H 1.08997 * 109.46965 * 60.00175 * 3 2 1 31 31 H 1.09004 * 109.46756 * 299.99770 * 4 2 1 32 32 H 1.08992 * 109.47081 * 60.00050 * 4 2 1 33 33 H 1.09002 * 109.46659 * 180.02562 * 4 2 1 34 34 H 1.09000 * 109.47426 * 299.99415 * 5 2 1 35 35 H 1.09003 * 109.46905 * 180.02562 * 5 2 1 36 36 H 1.08000 * 120.02659 * 359.97438 * 14 13 12 37 37 H 1.07999 * 119.97009 * 180.23164 * 15 14 13 38 38 H 1.08999 * 109.46655 * 125.01749 * 17 16 15 39 39 H 0.96701 * 113.99903 * 180.02562 * 18 17 16 40 40 H 1.08004 * 119.96780 * 179.97438 * 23 16 15 41 41 H 1.07997 * 120.03246 * 179.97438 * 24 23 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8782 -1.5212 5 6 2.4840 -0.8783 1.5211 6 8 2.0000 -2.2472 1.5211 7 6 2.5942 -3.1036 0.6754 8 8 3.4894 -2.7221 -0.0409 9 6 2.1447 -4.5409 0.6192 10 9 0.7938 -4.5935 0.2596 11 9 2.3162 -5.1326 1.8752 12 8 2.9237 -5.2462 -0.3494 13 6 2.6439 -6.5644 -0.5249 14 6 1.6442 -7.1682 0.2239 15 6 1.3582 -8.5072 0.0398 16 6 2.0745 -9.2479 -0.8822 17 6 1.7643 -10.7098 -1.0768 18 8 2.8879 -11.4934 -0.6702 19 14 0.2804 -11.1718 -0.0494 20 1 -0.0256 -12.6121 -0.2417 21 1 0.5710 -10.9140 1.3839 22 1 -0.8873 -10.3574 -0.4720 23 6 3.0752 -8.6497 -1.6255 24 6 3.3615 -7.3099 -1.4491 25 1 -0.3633 0.5139 0.8901 26 1 -0.3633 0.5139 -0.8899 27 1 -0.3634 -1.0276 -0.0005 28 1 3.5740 1.7564 0.0005 29 1 2.1207 2.2703 -0.8899 30 1 2.1207 2.2702 0.8900 31 1 2.1206 -1.9059 -1.5211 32 1 2.1206 -0.3643 -2.4111 33 1 3.5740 -0.8786 -1.5209 34 1 2.1208 -0.3645 2.4111 35 1 3.5740 -0.8779 1.5213 36 1 1.0875 -6.5911 0.9474 37 1 0.5775 -8.9768 0.6197 38 1 1.5509 -10.8989 -2.1289 39 1 2.7588 -12.4467 -0.7686 40 1 3.6335 -9.2306 -2.3448 41 1 4.1435 -6.8432 -2.0297 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_4146828_4858416.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:54:43 Heat of formation + Delta-G solvation = -241.847741 kcal Electronic energy + Delta-G solvation = -27418.090175 eV Core-core repulsion = 23059.196290 eV Total energy + Delta-G solvation = -4358.893884 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 334.105 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -50.82068 -48.82143 -41.92491 -41.26920 -39.28807 -37.93020 -37.30340 -32.50397 -32.07765 -30.29430 -29.58265 -28.57661 -28.48122 -27.73582 -26.17739 -24.52916 -22.92334 -22.33816 -20.68134 -19.81264 -19.73714 -18.62374 -18.54155 -17.81433 -17.55909 -17.07899 -16.49619 -16.25698 -15.91835 -15.80756 -15.40534 -15.29608 -15.05480 -14.77651 -14.71753 -14.56710 -14.40910 -14.27189 -14.20831 -14.09184 -13.92297 -13.70115 -13.58680 -13.41174 -13.20178 -13.16521 -13.07274 -12.81158 -12.52953 -12.23144 -12.00956 -11.98133 -11.74710 -11.04009 -10.91381 -10.69444 -10.40638 -10.12023 -9.51185 0.06645 0.07078 0.21653 0.35571 1.09067 1.27154 1.39156 1.45846 1.55268 1.67702 1.76808 1.86266 2.05674 2.37379 2.48060 2.92028 3.20212 3.33676 3.57257 3.70281 3.86177 3.89914 4.10992 4.18805 4.31031 4.42068 4.52225 4.57708 4.59260 4.65662 4.66455 4.72799 4.74635 4.82043 4.83653 4.95286 5.09805 5.34374 5.39114 5.41614 5.43926 5.57982 5.86838 6.02268 6.52692 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.447 4.447 2 Si 0.998 3.002 3 C -0.444 4.444 4 C -0.442 4.442 5 C -0.243 4.243 6 O -0.310 6.310 7 C 0.444 3.556 8 O -0.420 6.420 9 C 0.467 3.533 10 F -0.164 7.164 11 F -0.164 7.164 12 O -0.286 6.286 13 C 0.104 3.896 14 C -0.184 4.184 15 C -0.083 4.083 16 C -0.095 4.095 17 C -0.079 4.079 18 O -0.544 6.544 19 Si 0.941 3.059 20 H -0.255 1.255 21 H -0.247 1.247 22 H -0.248 1.248 23 C -0.053 4.053 24 C -0.123 4.123 25 H 0.072 0.928 26 H 0.074 0.926 27 H 0.071 0.929 28 H 0.073 0.927 29 H 0.077 0.923 30 H 0.072 0.928 31 H 0.063 0.937 32 H 0.069 0.931 33 H 0.079 0.921 34 H 0.124 0.876 35 H 0.090 0.910 36 H 0.138 0.862 37 H 0.129 0.871 38 H 0.079 0.921 39 H 0.381 0.619 40 H 0.141 0.859 41 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.676 0.312 -0.722 1.851 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.193 2.807 3 C -0.552 4.552 4 C -0.550 4.550 5 C -0.360 4.360 6 O -0.225 6.225 7 C 0.279 3.721 8 O -0.302 6.302 9 C 0.391 3.609 10 F -0.146 7.146 11 F -0.146 7.146 12 O -0.204 6.204 13 C 0.062 3.938 14 C -0.203 4.203 15 C -0.100 4.100 16 C -0.095 4.095 17 C -0.189 4.189 18 O -0.350 6.350 19 Si 0.764 3.236 20 H -0.179 1.179 21 H -0.170 1.170 22 H -0.172 1.172 23 C -0.071 4.071 24 C -0.141 4.141 25 H 0.091 0.909 26 H 0.093 0.907 27 H 0.091 0.909 28 H 0.092 0.908 29 H 0.096 0.904 30 H 0.091 0.909 31 H 0.082 0.918 32 H 0.088 0.912 33 H 0.098 0.902 34 H 0.142 0.858 35 H 0.108 0.892 36 H 0.155 0.845 37 H 0.147 0.853 38 H 0.097 0.903 39 H 0.229 0.771 40 H 0.159 0.841 41 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -1.741 0.918 -0.321 1.994 hybrid contribution 0.009 -0.490 0.018 0.491 sum -1.732 0.427 -0.303 1.810 Atomic orbital electron populations 1.26063 1.19644 1.04944 1.04890 0.79771 0.68047 0.67583 0.65263 1.25996 1.06588 1.17512 1.05121 1.26274 1.07202 1.07181 1.14312 1.28734 1.06057 0.81602 1.19588 1.86441 1.57945 1.21935 1.56174 1.22085 0.82684 0.86654 0.80690 1.90814 1.25901 1.75813 1.37686 1.20503 0.76193 0.87860 0.76339 1.93228 1.33545 1.96593 1.91212 1.93230 1.94701 1.84929 1.41692 1.86612 1.56723 1.21905 1.55122 1.18922 0.96622 0.80778 0.97508 1.21457 0.99629 0.96869 1.02309 1.20797 0.99161 0.93481 0.96610 1.19298 0.98203 0.93997 0.98047 1.24675 0.98894 0.90534 1.04821 1.86510 1.38611 1.21452 1.88441 0.85810 0.76420 0.80783 0.80596 1.17870 1.17009 1.17157 1.20871 0.95302 0.92854 0.98044 1.20511 1.01263 0.93535 0.98835 0.90850 0.90669 0.90944 0.90807 0.90372 0.90866 0.91807 0.91175 0.90188 0.85836 0.89164 0.84456 0.85317 0.90319 0.77124 0.84086 0.83957 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.67 8.65 101.05 0.87 1.54 16 2 Si 1.00 -2.26 12.12 -169.99 -2.06 -4.32 16 3 C -0.44 1.05 8.65 101.05 0.87 1.92 16 4 C -0.44 -0.11 7.10 101.05 0.72 0.61 16 5 C -0.24 0.34 5.40 101.05 0.55 0.88 16 6 O -0.31 -0.35 9.92 -39.24 -0.39 -0.73 16 7 C 0.44 1.09 6.25 36.01 0.23 1.32 16 8 O -0.42 -1.45 12.18 -25.48 -0.31 -1.76 16 9 C 0.47 1.29 2.16 36.01 0.08 1.36 16 10 F -0.16 -0.37 15.31 2.25 0.03 -0.34 16 11 F -0.16 -0.45 15.27 2.25 0.03 -0.42 16 12 O -0.29 -1.02 9.60 -39.37 -0.38 -1.40 16 13 C 0.10 0.32 6.48 -39.21 -0.25 0.06 16 14 C -0.18 -0.47 8.26 -39.43 -0.33 -0.80 16 15 C -0.08 -0.15 8.66 -39.60 -0.34 -0.49 16 16 C -0.10 -0.13 5.39 -104.60 -0.56 -0.70 16 17 C -0.08 0.05 2.79 36.01 0.10 0.15 16 18 O -0.54 0.09 12.81 -35.23 -0.45 -0.36 16 19 Si 0.94 -0.69 25.14 -169.99 -4.27 -4.96 16 20 H -0.25 0.17 7.11 56.52 0.40 0.57 16 21 H -0.25 -0.18 7.04 56.52 0.40 0.22 16 22 H -0.25 0.03 7.11 56.52 0.40 0.43 16 23 C -0.05 -0.05 9.68 -39.61 -0.38 -0.44 16 24 C -0.12 -0.21 9.99 -39.43 -0.39 -0.60 16 25 H 0.07 -0.15 7.96 -51.92 -0.41 -0.56 16 26 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 27 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 28 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 29 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 30 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 31 H 0.06 0.10 6.28 -51.93 -0.33 -0.22 16 32 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 33 H 0.08 0.08 7.43 -51.93 -0.39 -0.30 16 34 H 0.12 -0.44 7.96 -51.93 -0.41 -0.86 16 35 H 0.09 -0.14 7.52 -51.93 -0.39 -0.53 16 36 H 0.14 0.25 5.10 -52.49 -0.27 -0.01 16 37 H 0.13 0.04 4.86 -52.49 -0.25 -0.21 16 38 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 39 H 0.38 -1.74 8.74 45.56 0.40 -1.34 16 40 H 0.14 -0.12 8.06 -52.48 -0.42 -0.54 16 41 H 0.14 0.02 8.06 -52.49 -0.42 -0.41 16 LS Contribution 350.77 15.07 5.29 5.29 Total: 0.00 -5.84 350.77 -5.95 -11.79 By element: Atomic # 1 Polarization: -3.01 SS G_CDS: -4.59 Total: -7.61 kcal Atomic # 6 Polarization: 3.67 SS G_CDS: 1.15 Total: 4.83 kcal Atomic # 8 Polarization: -2.73 SS G_CDS: -1.53 Total: -4.26 kcal Atomic # 9 Polarization: -0.82 SS G_CDS: 0.07 Total: -0.75 kcal Atomic # 14 Polarization: -2.95 SS G_CDS: -6.33 Total: -9.29 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -5.84 -5.95 -11.79 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4146828_4858416.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -230.058 kcal (2) G-P(sol) polarization free energy of solvation -5.842 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -235.900 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.948 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.789 kcal (6) G-S(sol) free energy of system = (1) + (5) -241.848 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds