Wall clock time and date at job start Sat Mar 6 2021 06:32:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47030 * 2 1 4 4 C 1.50696 * 109.47278 * 239.99675 * 2 1 3 5 5 C 1.38268 * 119.94238 * 119.72540 * 4 2 1 6 6 C 1.38148 * 120.05255 * 179.72402 * 5 4 2 7 7 C 1.38730 * 119.94247 * 0.57453 * 6 5 4 8 8 O 1.35905 * 120.05113 * 179.68140 * 7 6 5 9 9 C 1.42894 * 117.00217 * 0.02562 * 8 7 6 10 10 C 1.50699 * 109.47024 * 180.02562 * 9 8 7 11 11 C 1.36499 * 125.81181 * 89.99748 * 10 9 8 12 12 C 1.47234 * 127.19898 * 359.96736 * 11 10 9 13 13 O 1.21541 * 119.99829 * 359.97438 * 12 11 10 14 14 O 1.34767 * 119.99981 * 180.02562 * 12 11 10 15 15 C 1.45206 * 116.99981 * 179.97438 * 14 12 11 16 16 C 1.53001 * 109.46962 * 179.97438 * 15 14 12 17 17 H 1.09002 * 112.84949 * 45.33470 * 16 15 14 18 18 C 1.53785 * 113.61083 * 176.52903 * 16 15 14 19 19 C 1.53774 * 87.08131 * 139.98374 * 18 16 15 20 20 H 1.08998 * 113.61960 * 89.11037 * 19 18 16 21 21 O 1.42902 * 113.61421 * 219.93760 * 19 18 16 22 22 C 1.53777 * 113.61727 * 274.13304 * 16 15 14 23 23 C 1.47052 * 105.60233 * 179.97438 * 11 10 9 24 24 C 1.34162 * 105.94683 * 0.02562 * 23 11 10 25 25 O 1.33631 * 125.80612 * 269.68863 * 10 9 8 26 26 C 1.38728 * 119.89348 * 359.69988 * 7 6 5 27 27 C 1.38153 * 119.93918 * 0.02562 * 26 7 6 28 28 H 0.96700 * 114.00022 * 300.00827 * 1 2 3 29 29 H 1.08997 * 109.46978 * 119.99554 * 2 1 3 30 30 H 1.48506 * 110.00048 * 178.68200 * 3 2 1 31 31 H 1.48502 * 109.99996 * 299.99525 * 3 2 1 32 32 H 1.07998 * 119.97204 * 359.97438 * 5 4 2 33 33 H 1.08006 * 120.02667 * 180.25271 * 6 5 4 34 34 H 1.09003 * 109.47358 * 299.99752 * 9 8 7 35 35 H 1.08997 * 109.47186 * 59.99912 * 9 8 7 36 36 H 1.09004 * 109.47044 * 300.00131 * 15 14 12 37 37 H 1.09005 * 109.47035 * 59.99457 * 15 14 12 38 38 H 1.09005 * 113.61114 * 254.52946 * 18 16 15 39 39 H 1.08997 * 113.61448 * 25.43453 * 18 16 15 40 40 H 0.96699 * 113.99575 * 179.97438 * 21 19 18 41 41 H 1.09008 * 113.61302 * 334.57321 * 22 16 15 42 42 H 1.09006 * 113.61311 * 105.46988 * 22 16 15 43 43 H 1.08003 * 127.02897 * 179.97438 * 23 11 10 44 44 H 1.08002 * 125.42397 * 179.97438 * 24 23 11 45 45 H 1.07999 * 120.03497 * 179.97438 * 26 7 6 46 46 H 1.08000 * 119.96925 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7216 -0.0357 -2.1426 6 6 3.1880 -0.6864 -3.2684 7 6 2.8532 -2.0145 -3.4893 8 8 3.3055 -2.6549 -4.5994 9 6 4.1222 -1.8998 -5.4965 10 6 4.5257 -2.7682 -6.6601 11 6 3.8357 -2.9077 -7.8296 12 6 2.5704 -2.2524 -8.2003 13 8 2.0294 -1.4916 -7.4221 14 8 2.0118 -2.4970 -9.4021 15 6 0.7640 -1.8167 -9.6997 16 6 0.2865 -2.2154 -11.0976 17 1 0.3552 -3.2882 -11.2783 18 6 -1.0761 -1.6126 -11.4783 19 6 -0.4962 -1.3903 -12.8851 20 1 -0.6409 -2.2371 -13.5559 21 8 -0.8801 -0.1453 -13.4723 22 6 0.8933 -1.3610 -12.2229 23 6 4.6204 -3.8496 -8.6418 24 6 5.6860 -4.1799 -7.8966 25 8 5.6230 -3.5281 -6.7250 26 6 2.0556 -2.6876 -2.5754 27 6 1.5963 -2.0340 -1.4482 28 1 -0.3933 0.4418 0.7650 29 1 1.7923 -0.5138 0.8900 30 1 3.5346 1.7703 0.0321 31 1 1.5616 2.4679 -1.2086 32 1 2.9776 0.9996 -1.9728 33 1 3.8086 -0.1602 -3.9787 34 1 3.5608 -1.0401 -5.8627 35 1 5.0141 -1.5552 -4.9733 36 1 0.0113 -2.0996 -8.9638 37 1 0.9204 -0.7385 -9.6633 38 1 -1.8945 -2.3321 -11.4521 39 1 -1.3072 -0.6876 -10.9501 40 1 -0.5181 0.0004 -14.3570 41 1 1.2016 -0.3670 -11.8986 42 1 1.6626 -1.8776 -12.7970 43 1 4.3863 -4.2038 -9.6349 44 1 6.4717 -4.8587 -8.1939 45 1 1.7931 -3.7214 -2.7453 46 1 0.9750 -2.5575 -0.7366 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_4549110_11354868.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:32:24 Heat of formation + Delta-G solvation = -120.304315 kcal Electronic energy + Delta-G solvation = -31274.209926 eV Core-core repulsion = 26678.357049 eV Total energy + Delta-G solvation = -4595.852877 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.138 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -43.84063 -41.34814 -41.21757 -40.21873 -39.11694 -37.50167 -37.19267 -36.00323 -34.26560 -32.96163 -31.98550 -31.48463 -29.85201 -27.99071 -26.84008 -26.12516 -25.19554 -23.83603 -23.43174 -22.55859 -22.13137 -21.08120 -20.53776 -19.48274 -19.24659 -18.63748 -18.37642 -18.05725 -17.63591 -17.35912 -17.06841 -16.94910 -16.65511 -16.56121 -16.43646 -15.87729 -15.60723 -15.41862 -15.10961 -14.97519 -14.57521 -14.39955 -14.02819 -14.00245 -13.94083 -13.75670 -13.65481 -13.54277 -13.35575 -13.20786 -12.79633 -12.46416 -12.42171 -12.18072 -12.13040 -11.93846 -11.81342 -11.69550 -11.51517 -11.27584 -11.05950 -10.81928 -10.29351 -10.00218 -9.99644 -9.15960 -4.95855 -0.19197 0.31277 0.34833 0.84143 1.28985 1.31187 1.64185 1.65248 1.89382 1.99635 2.39183 2.67006 3.11676 3.20993 3.34980 3.43492 3.44548 3.50694 3.59362 3.68405 3.82200 3.82590 3.82685 3.84416 3.97338 4.05901 4.13001 4.17687 4.27824 4.31733 4.36035 4.41163 4.48350 4.49932 4.61732 4.62681 4.68492 4.68885 4.69360 4.88099 4.95732 5.02700 5.08197 5.18757 5.25061 5.27567 5.39052 5.53214 5.70457 5.76497 6.28836 6.64083 6.65933 6.72643 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.066 4.066 3 Si 0.681 3.319 4 C -0.113 4.113 5 C -0.082 4.082 6 C -0.200 4.200 7 C 0.140 3.860 8 O -0.303 6.303 9 C 0.132 3.868 10 C 0.076 3.924 11 C -0.197 4.197 12 C 0.539 3.461 13 O -0.502 6.502 14 O -0.345 6.345 15 C 0.080 3.920 16 C -0.111 4.111 17 H 0.107 0.893 18 C -0.120 4.120 19 C 0.077 3.923 20 H 0.085 0.915 21 O -0.559 6.559 22 C -0.164 4.164 23 C -0.173 4.173 24 C -0.021 4.021 25 O -0.160 6.160 26 C -0.145 4.145 27 C -0.048 4.048 28 H 0.382 0.618 29 H 0.074 0.926 30 H -0.256 1.256 31 H -0.251 1.251 32 H 0.121 0.879 33 H 0.132 0.868 34 H 0.115 0.885 35 H 0.088 0.912 36 H 0.076 0.924 37 H 0.075 0.925 38 H 0.082 0.918 39 H 0.095 0.905 40 H 0.380 0.620 41 H 0.091 0.909 42 H 0.075 0.925 43 H 0.169 0.831 44 H 0.218 0.782 45 H 0.136 0.864 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.116 -0.818 -0.279 2.285 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.177 4.177 3 Si 0.582 3.418 4 C -0.113 4.113 5 C -0.099 4.099 6 C -0.219 4.219 7 C 0.095 3.905 8 O -0.217 6.217 9 C 0.057 3.943 10 C 0.023 3.977 11 C -0.200 4.200 12 C 0.384 3.616 13 O -0.392 6.392 14 O -0.262 6.262 15 C 0.007 3.993 16 C -0.129 4.129 17 H 0.125 0.875 18 C -0.157 4.157 19 C 0.018 3.982 20 H 0.103 0.897 21 O -0.365 6.365 22 C -0.202 4.202 23 C -0.191 4.191 24 C -0.087 4.087 25 O -0.055 6.055 26 C -0.164 4.164 27 C -0.066 4.066 28 H 0.229 0.771 29 H 0.092 0.908 30 H -0.181 1.181 31 H -0.176 1.176 32 H 0.138 0.862 33 H 0.150 0.850 34 H 0.132 0.868 35 H 0.106 0.894 36 H 0.095 0.905 37 H 0.094 0.906 38 H 0.100 0.900 39 H 0.113 0.887 40 H 0.228 0.772 41 H 0.109 0.891 42 H 0.093 0.907 43 H 0.186 0.814 44 H 0.235 0.765 45 H 0.154 0.846 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.365 -0.457 -0.344 2.434 hybrid contribution 0.402 -0.502 -1.037 1.220 sum 2.767 -0.958 -1.381 3.238 Atomic orbital electron populations 1.86500 1.17310 1.81759 1.49658 1.24599 0.85620 1.10093 0.97348 0.95423 0.80597 0.78276 0.87497 1.19258 1.00760 0.94810 0.96471 1.20636 0.97270 0.98508 0.93507 1.21118 1.06074 0.94279 1.00389 1.18916 0.94302 0.91000 0.86270 1.86084 1.64744 1.39557 1.31271 1.21138 0.95493 0.91413 0.86251 1.21917 0.86113 0.94519 0.95191 1.20269 0.96911 1.06053 0.96722 1.19852 0.83390 0.78651 0.79660 1.90879 1.62454 1.34882 1.50971 1.86534 1.38856 1.65869 1.34935 1.23128 0.82695 0.96844 0.96657 1.22369 0.96866 1.01244 0.92425 0.87492 1.23066 0.95945 1.01851 0.94868 1.23314 0.94342 0.86867 0.93725 0.89691 1.86532 1.75981 1.37932 1.36063 1.23817 0.97873 1.00896 0.97589 1.22972 0.94817 0.99517 1.01840 1.24144 1.01735 0.99427 0.83374 1.83819 1.38361 1.46496 1.36809 1.20507 1.00448 1.01217 0.94225 1.20816 0.96407 0.93365 0.95989 0.77091 0.90820 1.18068 1.17556 0.86193 0.85041 0.86784 0.89418 0.90549 0.90650 0.89964 0.88681 0.77197 0.89070 0.90673 0.81356 0.76547 0.84589 0.84569 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.50 12.74 -35.23 -0.45 -0.95 16 2 C -0.07 -0.05 2.81 36.00 0.10 0.06 16 3 Si 0.68 -0.24 29.78 -169.99 -5.06 -5.30 16 4 C -0.11 -0.37 5.42 -104.60 -0.57 -0.94 16 5 C -0.08 -0.29 8.66 -39.60 -0.34 -0.63 16 6 C -0.20 -0.66 9.04 -39.43 -0.36 -1.02 16 7 C 0.14 0.58 6.69 -39.22 -0.26 0.32 16 8 O -0.30 -1.32 10.12 -19.44 -0.20 -1.51 16 9 C 0.13 0.30 4.74 36.01 0.17 0.47 16 10 C 0.08 0.20 7.01 -34.94 -0.24 -0.05 16 11 C -0.20 -0.57 6.32 -103.30 -0.65 -1.22 16 12 C 0.54 2.26 7.95 34.39 0.27 2.53 16 13 O -0.50 -3.11 14.64 -19.30 -0.28 -3.40 16 14 O -0.35 -0.97 10.13 -40.67 -0.41 -1.38 16 15 C 0.08 0.11 5.30 37.16 0.20 0.31 16 16 C -0.11 0.05 4.01 -89.81 -0.36 -0.31 16 17 H 0.11 -0.12 8.14 -51.93 -0.42 -0.54 16 18 C -0.12 0.04 7.47 -25.92 -0.19 -0.15 16 19 C 0.08 -0.04 5.21 -25.83 -0.13 -0.18 16 20 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 21 O -0.56 -0.46 13.68 -35.23 -0.48 -0.94 16 22 C -0.16 0.10 7.48 -25.83 -0.19 -0.09 16 23 C -0.17 -0.04 11.05 -37.45 -0.41 -0.46 16 24 C -0.02 0.02 12.03 29.30 0.35 0.37 16 25 O -0.16 -0.25 10.52 7.69 0.08 -0.17 16 26 C -0.15 -0.51 9.99 -39.43 -0.39 -0.90 16 27 C -0.05 -0.14 9.60 -39.60 -0.38 -0.52 16 28 H 0.38 -1.61 8.74 45.56 0.40 -1.21 16 29 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 30 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 31 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 32 H 0.12 0.32 4.87 -52.49 -0.26 0.07 16 33 H 0.13 0.15 6.30 -52.48 -0.33 -0.18 16 34 H 0.11 0.28 6.01 -51.93 -0.31 -0.03 16 35 H 0.09 -0.01 7.66 -51.93 -0.40 -0.41 16 36 H 0.08 0.12 8.14 -51.93 -0.42 -0.31 16 37 H 0.08 0.12 7.87 -51.93 -0.41 -0.29 16 38 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.09 0.05 8.10 -51.93 -0.42 -0.38 16 40 H 0.38 -1.24 9.12 45.56 0.42 -0.82 16 41 H 0.09 0.03 7.92 -51.92 -0.41 -0.39 16 42 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 43 H 0.17 -0.29 8.06 -52.48 -0.42 -0.72 16 44 H 0.22 -1.10 8.06 -52.49 -0.42 -1.52 16 45 H 0.14 0.29 8.06 -52.49 -0.42 -0.14 16 46 H 0.14 0.18 8.06 -52.49 -0.42 -0.24 16 LS Contribution 394.11 15.07 5.94 5.94 Total: 0.00 -10.41 394.11 -9.41 -19.81 By element: Atomic # 1 Polarization: -4.53 SS G_CDS: -5.14 Total: -9.67 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: -3.40 Total: -2.43 kcal Atomic # 8 Polarization: -6.61 SS G_CDS: -1.74 Total: -8.35 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: -5.06 Total: -5.30 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -10.41 -9.41 -19.81 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4549110_11354868.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.493 kcal (2) G-P(sol) polarization free energy of solvation -10.406 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.899 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.405 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.811 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.304 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds