Wall clock time and date at job start Sat Mar 6 2021 07:33:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86294 * 109.47343 * 2 1 4 4 C 1.50701 * 109.47126 * 120.00325 * 2 1 3 5 5 C 1.38268 * 119.94670 * 64.99597 * 4 2 1 6 6 C 1.38136 * 120.05675 * 180.02562 * 5 4 2 7 7 C 1.38737 * 119.94594 * 359.97438 * 6 5 4 8 8 O 1.35902 * 120.05436 * 179.97438 * 7 6 5 9 9 C 1.42904 * 116.99570 * 180.02562 * 8 7 6 10 10 C 1.50697 * 109.46769 * 180.02562 * 9 8 7 11 11 C 1.36497 * 125.80988 * 90.00012 * 10 9 8 12 12 C 1.47236 * 127.20084 * 359.96218 * 11 10 9 13 13 O 1.21536 * 119.99774 * 359.97438 * 12 11 10 14 14 O 1.34768 * 119.99740 * 179.97438 * 12 11 10 15 15 C 1.45196 * 116.99741 * 179.97438 * 14 12 11 16 16 C 1.53004 * 109.47161 * 179.97438 * 15 14 12 17 17 H 1.09002 * 109.46782 * 55.00740 * 16 15 14 18 18 C 1.53001 * 109.47147 * 175.00218 * 16 15 14 19 19 C 1.53004 * 109.47178 * 180.02562 * 18 16 15 20 20 C 1.52998 * 109.46989 * 300.00126 * 19 18 16 21 21 H 1.09002 * 109.47359 * 300.00023 * 20 19 18 22 22 O 1.42897 * 109.47018 * 180.02562 * 20 19 18 23 23 C 1.53001 * 109.47263 * 59.99926 * 20 19 18 24 24 C 1.52998 * 109.47328 * 295.00532 * 16 15 14 25 25 C 1.47058 * 105.59768 * 179.97438 * 11 10 9 26 26 C 1.34160 * 105.95000 * 359.97438 * 25 11 10 27 27 O 1.33630 * 125.80672 * 270.24096 * 10 9 8 28 28 C 1.38732 * 119.88562 * 0.27617 * 7 6 5 29 29 C 1.38145 * 119.94211 * 359.47015 * 28 7 6 30 30 H 0.96703 * 114.00228 * 59.99895 * 1 2 3 31 31 H 1.09002 * 109.47133 * 240.00116 * 2 1 3 32 32 H 1.48505 * 110.00128 * 60.00136 * 3 2 1 33 33 H 1.48506 * 110.00198 * 181.31797 * 3 2 1 34 34 H 1.07999 * 119.96720 * 0.02784 * 5 4 2 35 35 H 1.08001 * 120.02972 * 179.97438 * 6 5 4 36 36 H 1.08994 * 109.47223 * 60.00123 * 9 8 7 37 37 H 1.08999 * 109.47126 * 299.99927 * 9 8 7 38 38 H 1.08996 * 109.47922 * 300.00727 * 15 14 12 39 39 H 1.09005 * 109.47014 * 60.00323 * 15 14 12 40 40 H 1.09000 * 109.47566 * 300.00628 * 18 16 15 41 41 H 1.09000 * 109.47418 * 60.00064 * 18 16 15 42 42 H 1.09002 * 109.47089 * 60.00314 * 19 18 16 43 43 H 1.09000 * 109.46892 * 180.02562 * 19 18 16 44 44 H 0.96699 * 113.99849 * 179.97438 * 22 20 19 45 45 H 1.09002 * 109.46854 * 59.99788 * 23 20 19 46 46 H 1.08995 * 109.47167 * 179.97438 * 23 20 19 47 47 H 1.08994 * 109.47029 * 299.99823 * 24 16 15 48 48 H 1.08991 * 109.47149 * 59.99861 * 24 16 15 49 49 H 1.07998 * 127.02763 * 180.02562 * 25 11 10 50 50 H 1.08002 * 125.42521 * 179.97438 * 26 25 11 51 51 H 1.08004 * 120.02610 * 179.71518 * 28 7 6 52 52 H 1.08005 * 119.96664 * 180.22689 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6839 -2.0606 1.3972 6 6 2.1429 -2.7140 2.5244 7 6 2.8530 -2.0145 3.4894 8 8 3.3051 -2.6551 4.5995 9 6 4.0283 -1.8717 5.5511 10 6 4.4472 -2.7448 6.7057 11 6 5.6152 -3.4455 6.7945 12 6 6.6987 -3.4996 5.7991 13 8 6.6029 -2.8733 4.7619 14 8 7.7967 -4.2436 6.0380 15 6 8.8243 -4.2505 5.0123 16 6 9.9845 -5.1427 5.4585 17 1 9.6064 -6.1357 5.7015 18 6 11.0095 -5.2499 4.3277 19 6 12.1694 -6.1426 4.7737 20 6 12.8351 -5.5343 6.0097 21 1 13.2135 -4.5413 5.7669 22 8 13.9187 -6.3677 6.4258 23 6 11.8100 -5.4270 7.1404 24 6 10.6501 -4.5338 6.6943 25 6 5.5648 -4.1354 8.0923 26 6 4.3941 -3.7893 8.6485 27 8 3.7363 -2.9684 7.8149 28 6 3.0954 -0.6588 3.3222 29 6 2.6388 -0.0112 2.1906 30 1 -0.3934 0.4417 -0.7650 31 1 1.7923 -0.5138 -0.8900 32 1 1.5615 2.4679 1.2085 33 1 3.5346 1.7702 -0.0321 34 1 1.1314 -2.6047 0.6455 35 1 1.9490 -3.7685 2.6544 36 1 3.3922 -1.0657 5.9167 37 1 4.9135 -1.4490 5.0759 38 1 8.4066 -4.6352 4.0819 39 1 9.1874 -3.2348 4.8548 40 1 10.5354 -5.6837 3.4473 41 1 11.3876 -4.2569 4.0846 42 1 11.7910 -7.1357 5.0165 43 1 12.8998 -6.2186 3.9683 44 1 14.3880 -6.0422 7.2061 45 1 11.4317 -6.4200 7.3832 46 1 12.2844 -4.9940 8.0210 47 1 11.0281 -3.5408 6.4512 48 1 9.9198 -4.4574 7.4997 49 1 6.3170 -4.7868 8.5122 50 1 4.0357 -4.1224 9.6114 51 1 3.6440 -0.1111 4.0742 52 1 2.8305 1.0435 2.0583 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_4549110_16737258.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:33:24 Heat of formation + Delta-G solvation = -163.396387 kcal Electronic energy + Delta-G solvation = -35481.906480 eV Core-core repulsion = 30573.109753 eV Total energy + Delta-G solvation = -4908.796727 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.170 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -43.85086 -41.35168 -41.22435 -40.06947 -39.12803 -37.74406 -37.21604 -36.54778 -34.28829 -32.97155 -32.00391 -31.95215 -31.91971 -31.49022 -28.28830 -26.89359 -26.08040 -24.84346 -23.89877 -23.82268 -22.77356 -22.24027 -22.10288 -21.12956 -20.78282 -19.49390 -19.27403 -18.38484 -18.26955 -18.08127 -17.65126 -17.43420 -17.13788 -16.92627 -16.70286 -16.64729 -16.39447 -15.84302 -15.61246 -15.56035 -15.35114 -15.15328 -14.86197 -14.52342 -14.46689 -14.32706 -14.01940 -13.92825 -13.89042 -13.78966 -13.62466 -13.49888 -13.31475 -13.14792 -13.09403 -12.59790 -12.43476 -12.23137 -12.18877 -11.92466 -11.89316 -11.82353 -11.76568 -11.59636 -11.47402 -11.18752 -11.07035 -10.77478 -10.29107 -10.01532 -10.00723 -9.18409 -4.96866 -0.20593 0.30297 0.33489 0.83103 1.28234 1.29917 1.63692 1.64800 1.87642 1.97952 2.38077 2.65459 3.09724 3.19498 3.42310 3.45549 3.52679 3.54376 3.65441 3.66913 3.75267 3.81812 3.83396 3.96578 3.98701 4.03438 4.09227 4.18638 4.26069 4.26431 4.26731 4.32817 4.37029 4.38868 4.40746 4.43136 4.47574 4.59597 4.61883 4.67568 4.70234 4.85368 4.94604 4.96429 4.98700 5.06281 5.06915 5.07604 5.17450 5.22369 5.26526 5.29659 5.39498 5.52059 5.68985 5.75734 6.27653 6.64696 6.66506 6.70521 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.066 4.066 3 Si 0.680 3.320 4 C -0.112 4.112 5 C -0.048 4.048 6 C -0.145 4.145 7 C 0.141 3.859 8 O -0.303 6.303 9 C 0.132 3.868 10 C 0.076 3.924 11 C -0.197 4.197 12 C 0.540 3.460 13 O -0.503 6.503 14 O -0.345 6.345 15 C 0.072 3.928 16 C -0.089 4.089 17 H 0.086 0.914 18 C -0.110 4.110 19 C -0.111 4.111 20 C 0.102 3.898 21 H 0.055 0.945 22 O -0.569 6.569 23 C -0.152 4.152 24 C -0.112 4.112 25 C -0.173 4.173 26 C -0.020 4.020 27 O -0.159 6.159 28 C -0.200 4.200 29 C -0.081 4.081 30 H 0.381 0.619 31 H 0.074 0.926 32 H -0.251 1.251 33 H -0.255 1.255 34 H 0.136 0.864 35 H 0.136 0.864 36 H 0.088 0.912 37 H 0.115 0.885 38 H 0.075 0.925 39 H 0.073 0.927 40 H 0.075 0.925 41 H 0.070 0.930 42 H 0.072 0.928 43 H 0.074 0.926 44 H 0.379 0.621 45 H 0.072 0.928 46 H 0.066 0.934 47 H 0.064 0.936 48 H 0.074 0.926 49 H 0.169 0.831 50 H 0.218 0.782 51 H 0.132 0.868 52 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.480 1.719 0.327 1.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.177 4.177 3 Si 0.582 3.418 4 C -0.113 4.113 5 C -0.066 4.066 6 C -0.164 4.164 7 C 0.096 3.904 8 O -0.217 6.217 9 C 0.057 3.943 10 C 0.023 3.977 11 C -0.200 4.200 12 C 0.385 3.615 13 O -0.393 6.393 14 O -0.261 6.261 15 C -0.001 4.001 16 C -0.107 4.107 17 H 0.105 0.895 18 C -0.148 4.148 19 C -0.148 4.148 20 C 0.044 3.956 21 H 0.073 0.927 22 O -0.375 6.375 23 C -0.189 4.189 24 C -0.149 4.149 25 C -0.192 4.192 26 C -0.086 4.086 27 O -0.054 6.054 28 C -0.219 4.219 29 C -0.098 4.098 30 H 0.229 0.771 31 H 0.091 0.909 32 H -0.176 1.176 33 H -0.180 1.180 34 H 0.154 0.846 35 H 0.154 0.846 36 H 0.106 0.894 37 H 0.132 0.868 38 H 0.093 0.907 39 H 0.092 0.908 40 H 0.094 0.906 41 H 0.088 0.912 42 H 0.091 0.909 43 H 0.093 0.907 44 H 0.226 0.774 45 H 0.091 0.909 46 H 0.085 0.915 47 H 0.083 0.917 48 H 0.093 0.907 49 H 0.186 0.814 50 H 0.235 0.765 51 H 0.150 0.850 52 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 0.581 1.743 0.595 1.931 hybrid contribution 0.552 -0.121 0.836 1.009 sum 1.132 1.622 1.431 2.441 Atomic orbital electron populations 1.86499 1.17327 1.81778 1.49644 1.24602 0.85597 1.10133 0.97346 0.95408 0.80809 0.78282 0.87324 1.19245 1.01472 0.94457 0.96099 1.20822 0.96148 0.93351 0.96317 1.20502 1.01409 1.00933 0.93546 1.18920 0.94155 0.90823 0.86548 1.86089 1.68769 1.37696 1.29096 1.21143 0.98512 0.90509 0.84139 1.21927 0.89654 0.98397 0.87753 1.20266 0.95913 1.06268 0.97556 1.19840 0.80945 0.76208 0.84474 1.90869 1.79467 1.42538 1.26403 1.86526 1.27761 1.64134 1.47703 1.23209 0.86124 1.01287 0.89509 1.21274 0.93251 0.99863 0.96332 0.89520 1.21477 0.95093 1.00815 0.97419 1.21440 0.96983 0.99653 0.96771 1.21849 0.86411 0.93302 0.94072 0.92713 1.86520 1.47273 1.52765 1.50915 1.22283 0.96997 1.01186 0.98483 1.21536 0.97223 0.98699 0.97488 1.22970 0.99435 1.03289 0.93466 1.24148 0.93023 0.94763 0.96713 1.83823 1.43508 1.53271 1.24844 1.21121 1.06488 0.93810 1.00467 1.20661 0.97316 0.98682 0.93187 0.77110 0.90852 1.17618 1.17988 0.84608 0.84581 0.89418 0.86780 0.90710 0.90836 0.90624 0.91167 0.90883 0.90745 0.77390 0.90884 0.91490 0.91709 0.90724 0.81368 0.76550 0.85044 0.86150 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.40 12.81 -35.23 -0.45 -0.85 16 2 C -0.07 -0.04 2.79 36.01 0.10 0.06 16 3 Si 0.68 -0.30 29.85 -169.99 -5.07 -5.37 16 4 C -0.11 -0.36 5.39 -104.60 -0.56 -0.92 16 5 C -0.05 -0.14 9.68 -39.61 -0.38 -0.52 16 6 C -0.15 -0.48 9.99 -39.43 -0.39 -0.88 16 7 C 0.14 0.56 6.69 -39.21 -0.26 0.30 16 8 O -0.30 -1.27 10.12 -19.43 -0.20 -1.47 16 9 C 0.13 0.27 4.74 36.00 0.17 0.44 16 10 C 0.08 0.19 7.01 -34.94 -0.24 -0.06 16 11 C -0.20 -0.51 6.32 -103.29 -0.65 -1.16 16 12 C 0.54 1.96 7.95 34.39 0.27 2.24 16 13 O -0.50 -2.79 14.64 -19.29 -0.28 -3.07 16 14 O -0.34 -0.74 9.68 -40.68 -0.39 -1.14 16 15 C 0.07 0.04 4.85 37.16 0.18 0.22 16 16 C -0.09 0.08 2.43 -90.62 -0.22 -0.14 16 17 H 0.09 -0.04 8.14 -51.93 -0.42 -0.47 16 18 C -0.11 0.15 5.20 -26.73 -0.14 0.01 16 19 C -0.11 0.03 5.57 -26.73 -0.15 -0.12 16 20 C 0.10 -0.03 3.47 -26.73 -0.09 -0.12 16 21 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 22 O -0.57 -0.57 13.32 -35.23 -0.47 -1.03 16 23 C -0.15 0.17 5.55 -26.71 -0.15 0.02 16 24 C -0.11 0.12 5.11 -26.71 -0.14 -0.02 16 25 C -0.17 -0.01 11.05 -37.44 -0.41 -0.42 16 26 C -0.02 0.02 12.03 29.30 0.35 0.37 16 27 O -0.16 -0.24 10.52 7.70 0.08 -0.16 16 28 C -0.20 -0.63 9.04 -39.43 -0.36 -0.99 16 29 C -0.08 -0.28 8.66 -39.61 -0.34 -0.62 16 30 H 0.38 -1.67 8.74 45.56 0.40 -1.27 16 31 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 32 H -0.25 -0.66 7.05 56.52 0.40 -0.26 16 33 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 34 H 0.14 0.15 8.06 -52.49 -0.42 -0.27 16 35 H 0.14 0.27 8.06 -52.49 -0.42 -0.16 16 36 H 0.09 -0.01 7.65 -51.93 -0.40 -0.41 16 37 H 0.11 0.23 6.02 -51.93 -0.31 -0.08 16 38 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 39 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 40 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 41 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 42 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 43 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 44 H 0.38 -1.08 9.08 45.56 0.41 -0.67 16 45 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 46 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 47 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 48 H 0.07 -0.04 7.82 -51.93 -0.41 -0.45 16 49 H 0.17 -0.32 8.06 -52.49 -0.42 -0.74 16 50 H 0.22 -1.10 8.06 -52.49 -0.42 -1.52 16 51 H 0.13 0.13 6.30 -52.48 -0.33 -0.20 16 52 H 0.12 0.31 4.86 -52.48 -0.26 0.06 16 LS Contribution 428.81 15.07 6.46 6.46 Total: 0.00 -10.05 428.81 -10.59 -20.64 By element: Atomic # 1 Polarization: -4.84 SS G_CDS: -6.85 Total: -11.68 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -3.42 Total: -2.32 kcal Atomic # 8 Polarization: -6.01 SS G_CDS: -1.71 Total: -7.72 kcal Atomic # 14 Polarization: -0.30 SS G_CDS: -5.07 Total: -5.37 kcal Total LS contribution 6.46 Total: 6.46 kcal Total: -10.05 -10.59 -20.64 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4549110_16737258.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.756 kcal (2) G-P(sol) polarization free energy of solvation -10.050 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.806 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.591 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.641 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds