Wall clock time and date at job start Sat Mar 6 2021 06:32:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86297 * 109.47483 * 2 1 4 4 C 1.50706 * 109.47073 * 239.99890 * 2 1 3 5 5 C 1.38244 * 119.94139 * 119.97522 * 4 2 1 6 6 C 1.38171 * 120.05181 * 179.77149 * 5 4 2 7 7 C 1.38710 * 119.94289 * 0.53181 * 6 5 4 8 8 O 1.35905 * 120.05093 * 179.74871 * 7 6 5 9 9 C 1.42895 * 117.00166 * 359.72198 * 8 7 6 10 10 C 1.50700 * 109.46744 * 179.97438 * 9 8 7 11 11 O 1.20826 * 120.00590 * 0.02562 * 10 9 8 12 12 O 1.34235 * 119.99708 * 179.97438 * 10 9 8 13 13 C 1.45196 * 116.99939 * 180.02562 * 12 10 9 14 14 C 1.50699 * 109.47450 * 179.97438 * 13 12 10 15 15 O 1.20760 * 119.99526 * 0.02562 * 14 13 12 16 16 C 1.50696 * 120.00565 * 179.97438 * 14 13 12 17 17 H 1.08997 * 109.46779 * 45.93516 * 16 14 13 18 18 C 1.52996 * 109.47588 * 165.94051 * 16 14 13 19 19 C 1.52997 * 109.47034 * 59.99987 * 18 16 14 20 20 C 1.52994 * 109.47431 * 60.00187 * 19 18 16 21 21 H 1.09002 * 109.46858 * 60.00023 * 20 19 18 22 22 C 1.52997 * 109.47431 * 179.97438 * 20 19 18 23 23 F 1.39895 * 109.47454 * 60.00048 * 22 20 19 24 24 F 1.39905 * 109.47411 * 180.02562 * 22 20 19 25 25 F 1.39901 * 109.46925 * 299.99975 * 22 20 19 26 26 C 1.52999 * 109.47307 * 300.00185 * 20 19 18 27 27 C 1.52997 * 109.47026 * 59.99567 * 26 20 19 28 28 C 1.38752 * 119.88843 * 359.47242 * 7 6 5 29 29 N 1.48007 * 120.02453 * 180.27406 * 28 7 6 30 30 O 1.21798 * 119.99835 * 179.97438 * 29 28 7 31 31 O 1.21801 * 120.00146 * 0.02562 * 29 28 7 32 32 C 1.38121 * 119.94408 * 0.24861 * 28 7 6 33 33 H 0.96704 * 113.99652 * 299.99758 * 1 2 3 34 34 H 1.08998 * 109.47237 * 120.00532 * 2 1 3 35 35 H 1.48497 * 110.00028 * 178.68350 * 3 2 1 36 36 H 1.48500 * 109.99873 * 300.00630 * 3 2 1 37 37 H 1.07997 * 119.97530 * 0.02811 * 5 4 2 38 38 H 1.07999 * 120.02600 * 180.25609 * 6 5 4 39 39 H 1.09004 * 109.47080 * 60.00469 * 9 8 7 40 40 H 1.08997 * 109.47211 * 300.00162 * 9 8 7 41 41 H 1.09009 * 109.46994 * 60.00107 * 13 12 10 42 42 H 1.09002 * 109.47505 * 300.00492 * 13 12 10 43 43 H 1.09009 * 109.46637 * 300.00152 * 18 16 14 44 44 H 1.08992 * 109.47477 * 180.02562 * 18 16 14 45 45 H 1.09002 * 109.47587 * 300.00199 * 19 18 16 46 46 H 1.09007 * 109.47160 * 180.02562 * 19 18 16 47 47 H 1.08994 * 109.47548 * 179.97438 * 26 20 19 48 48 H 1.09002 * 109.47029 * 299.99734 * 26 20 19 49 49 H 1.09000 * 109.47424 * 180.02562 * 27 26 20 50 50 H 1.09002 * 109.47587 * 60.00346 * 27 26 20 51 51 H 1.07999 * 119.97233 * 179.97438 * 32 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2305 5 6 2.7257 -0.0373 -2.1400 6 6 3.1914 -0.6878 -3.2665 7 6 2.8522 -2.0141 -3.4900 8 8 3.3048 -2.6546 -4.6000 9 6 4.1209 -1.8992 -5.4974 10 6 4.5259 -2.7682 -6.6602 11 8 4.1535 -3.9163 -6.7150 12 8 5.2995 -2.2662 -7.6356 13 6 5.6500 -3.1602 -8.7247 14 6 6.5150 -2.4274 -9.7176 15 8 6.8065 -1.2712 -9.5266 16 6 7.0173 -3.1377 -10.9481 17 1 6.1988 -3.6924 -11.4069 18 6 7.5592 -2.1108 -11.9444 19 6 8.7081 -1.3324 -11.3003 20 6 9.8250 -2.3020 -10.9092 21 1 10.1883 -2.8158 -11.7992 22 6 10.9742 -1.5234 -10.2657 23 9 10.5084 -0.8635 -9.1234 24 9 11.9958 -2.4100 -9.9085 25 9 11.4694 -0.5847 -11.1771 26 6 9.2832 -3.3290 -9.9129 27 6 8.1343 -4.1074 -10.5570 28 6 2.0548 -2.6874 -2.5757 29 7 1.6960 -4.1044 -2.8082 30 8 0.9964 -4.6951 -2.0050 31 8 2.1012 -4.6801 -3.8021 32 6 1.5965 -2.0344 -1.4482 33 1 -0.3933 0.4417 0.7651 34 1 1.7924 -0.5139 0.8899 35 1 3.5347 1.7701 0.0321 36 1 1.5615 2.4679 -1.2084 37 1 2.9858 0.9966 -1.9677 38 1 3.8153 -0.1628 -3.9746 39 1 5.0128 -1.5540 -4.9744 40 1 3.5590 -1.0401 -5.8637 41 1 4.7414 -3.5040 -9.2192 42 1 6.1955 -4.0174 -8.3301 43 1 6.7633 -1.4200 -12.2230 44 1 7.9220 -2.6245 -12.8345 45 1 8.3449 -0.8185 -10.4103 46 1 9.0938 -0.6004 -12.0100 47 1 10.0788 -4.0200 -9.6345 48 1 8.9199 -2.8152 -9.0228 49 1 7.7480 -4.8388 -9.8471 50 1 8.4975 -4.6213 -11.4470 51 1 0.9755 -2.5579 -0.7364 There are 82 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 82 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_4549112_12428076.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 06:32:50 Heat of formation + Delta-G solvation = -297.747152 kcal Electronic energy + Delta-G solvation = -45007.294019 eV Core-core repulsion = 38428.427516 eV Total energy + Delta-G solvation = -6578.866503 eV No. of doubly occupied orbitals = 82 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.136 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -51.17576 -48.66690 -48.65579 -43.41609 -42.24530 -41.76319 -41.19523 -39.70084 -38.46560 -37.68974 -37.63046 -37.36562 -33.72482 -33.55250 -32.53333 -32.04227 -31.15031 -29.54746 -27.93859 -26.95593 -26.58554 -24.53674 -23.92165 -23.74812 -22.93811 -22.33064 -21.98820 -20.65020 -20.25946 -19.90526 -19.38599 -19.35792 -19.30336 -18.79884 -18.74059 -18.64743 -18.47457 -18.34972 -18.21887 -17.42746 -17.24634 -16.65339 -16.61445 -16.50615 -16.04977 -15.89880 -15.66555 -15.57516 -15.32702 -15.26033 -15.11213 -14.88831 -14.83258 -14.80877 -14.73556 -14.52258 -14.43686 -14.26231 -14.07693 -13.89655 -13.74217 -13.53891 -13.27053 -13.24886 -13.06991 -12.88793 -12.79939 -12.77475 -12.52994 -12.34196 -12.27626 -12.20990 -12.12670 -12.03756 -12.00120 -11.82097 -11.42183 -11.29992 -11.01967 -10.45445 -10.34342 -9.91438 -4.91595 -1.43654 -0.41307 0.02497 0.19657 0.56834 0.75427 0.82480 1.25578 1.66308 1.74487 1.83455 1.86230 1.91048 2.66279 2.79119 2.92515 2.93245 3.01018 3.05188 3.17839 3.40014 3.45916 3.49583 3.54083 3.61980 3.71256 3.72640 3.80983 3.90353 3.90669 3.97713 4.04269 4.08494 4.09684 4.14506 4.20012 4.25034 4.36983 4.38383 4.46664 4.46889 4.65590 4.66738 4.82078 4.87268 4.91050 4.97140 4.98292 5.06508 5.08471 5.13196 5.17696 5.35614 5.49944 6.32286 6.36655 6.45025 6.85108 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.567 6.567 2 C -0.085 4.085 3 Si 0.776 3.224 4 C -0.114 4.114 5 C -0.028 4.028 6 C -0.190 4.190 7 C 0.195 3.805 8 O -0.288 6.288 9 C 0.052 3.948 10 C 0.466 3.534 11 O -0.507 6.507 12 O -0.341 6.341 13 C 0.004 3.996 14 C 0.365 3.635 15 O -0.450 6.450 16 C -0.128 4.128 17 H 0.142 0.858 18 C -0.098 4.098 19 C -0.145 4.145 20 C -0.123 4.123 21 H 0.136 0.864 22 C 0.444 3.556 23 F -0.194 7.194 24 F -0.191 7.191 25 F -0.192 7.192 26 C -0.130 4.130 27 C -0.102 4.102 28 C -0.095 4.095 29 N 0.034 4.966 30 O -0.188 6.188 31 O -0.167 6.167 32 C 0.004 3.996 33 H 0.408 0.592 34 H 0.102 0.898 35 H -0.273 1.273 36 H -0.284 1.284 37 H 0.161 0.839 38 H 0.199 0.801 39 H 0.151 0.849 40 H 0.150 0.850 41 H 0.125 0.875 42 H 0.122 0.878 43 H 0.072 0.928 44 H 0.100 0.900 45 H 0.088 0.912 46 H 0.070 0.930 47 H 0.088 0.912 48 H 0.056 0.944 49 H 0.095 0.905 50 H 0.109 0.891 51 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.359 5.922 0.614 5.964 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.377 6.377 2 C -0.193 4.193 3 Si 0.679 3.321 4 C -0.115 4.115 5 C -0.046 4.046 6 C -0.208 4.208 7 C 0.145 3.855 8 O -0.199 6.199 9 C -0.022 4.022 10 C 0.308 3.692 11 O -0.394 6.394 12 O -0.257 6.257 13 C -0.069 4.069 14 C 0.240 3.760 15 O -0.323 6.323 16 C -0.146 4.146 17 H 0.160 0.840 18 C -0.135 4.135 19 C -0.182 4.182 20 C -0.142 4.142 21 H 0.154 0.846 22 C 0.390 3.610 23 F -0.176 7.176 24 F -0.172 7.172 25 F -0.174 7.174 26 C -0.168 4.168 27 C -0.139 4.139 28 C -0.180 4.180 29 N 0.546 4.454 30 O -0.398 6.398 31 O -0.382 6.382 32 C -0.015 4.015 33 H 0.260 0.740 34 H 0.119 0.881 35 H -0.199 1.199 36 H -0.211 1.211 37 H 0.178 0.822 38 H 0.216 0.784 39 H 0.168 0.832 40 H 0.168 0.832 41 H 0.143 0.857 42 H 0.140 0.860 43 H 0.090 0.910 44 H 0.118 0.882 45 H 0.106 0.894 46 H 0.089 0.911 47 H 0.107 0.893 48 H 0.075 0.925 49 H 0.114 0.886 50 H 0.128 0.872 51 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 1.145 6.916 -0.242 7.015 hybrid contribution 0.203 -1.026 -0.054 1.047 sum 1.348 5.890 -0.297 6.050 Atomic orbital electron populations 1.86442 1.16976 1.82674 1.51657 1.24959 0.86304 1.12002 0.96069 0.93488 0.78046 0.74537 0.86049 1.19698 1.00568 0.92526 0.98728 1.21481 0.91772 1.00178 0.91136 1.21671 1.06036 0.91216 1.01902 1.18709 0.90253 0.91582 0.84919 1.86363 1.63790 1.39369 1.30352 1.22498 0.98829 0.93052 0.87866 1.23169 0.75777 0.86882 0.83405 1.90816 1.51896 1.19810 1.76899 1.86506 1.62948 1.44492 1.31798 1.23927 1.02524 0.93877 0.86614 1.24920 0.76393 0.87986 0.86697 1.90359 1.48139 1.19273 1.74535 1.21826 1.01290 0.98296 0.93223 0.83998 1.21396 0.97147 0.97137 0.97837 1.22041 0.94857 0.97747 1.03573 1.22572 0.92520 0.97508 1.01569 0.84572 1.21178 0.84725 0.78441 0.76663 1.93158 1.88499 1.82566 1.53333 1.93168 1.63187 1.68382 1.92471 1.93163 1.89365 1.67806 1.67042 1.21751 1.00439 0.97365 0.97197 1.21557 0.92417 0.96349 1.03588 1.20820 1.12577 0.82089 1.02524 1.43731 0.98420 1.03554 0.99649 1.94511 1.35520 1.67850 1.41934 1.94659 1.56244 1.68983 1.18294 1.20904 0.93497 0.94290 0.92768 0.74001 0.88061 1.19875 1.21063 0.82249 0.78424 0.83183 0.83215 0.85745 0.86033 0.90955 0.88193 0.89353 0.91100 0.89332 0.92529 0.88639 0.87241 0.81737 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 2.61 12.74 -148.98 -1.90 0.71 16 2 C -0.08 0.53 2.81 71.24 0.20 0.74 16 3 Si 0.78 -7.16 29.78 68.60 2.04 -5.12 16 4 C -0.11 0.12 5.42 -19.85 -0.11 0.02 16 5 C -0.03 0.11 8.66 22.26 0.19 0.31 16 6 C -0.19 0.91 9.04 22.37 0.20 1.11 16 7 C 0.19 0.61 6.67 22.51 0.15 0.76 16 8 O -0.29 -1.52 7.68 -63.44 -0.49 -2.01 16 9 C 0.05 -0.20 5.33 71.24 0.38 0.18 16 10 C 0.47 1.13 8.03 71.24 0.57 1.70 16 11 O -0.51 -5.38 16.25 28.40 0.46 -4.92 16 12 O -0.34 -0.20 9.75 -45.10 -0.44 -0.64 16 13 C 0.00 -0.02 5.86 71.24 0.42 0.40 16 14 C 0.37 -1.31 5.12 29.10 0.15 -1.16 16 15 O -0.45 -1.69 13.37 17.40 0.23 -1.46 16 16 C -0.13 1.24 2.94 -11.54 -0.03 1.21 16 17 H 0.14 -2.16 8.14 -2.39 -0.02 -2.18 16 18 C -0.10 0.73 5.21 30.59 0.16 0.89 16 19 C -0.15 0.31 4.67 30.59 0.14 0.45 16 20 C -0.12 0.41 2.16 -10.80 -0.02 0.39 16 21 H 0.14 -1.06 8.14 -2.39 -0.02 -1.08 16 22 C 0.44 1.42 2.69 71.98 0.19 1.61 16 23 F -0.19 -1.38 16.28 44.97 0.73 -0.65 16 24 F -0.19 -0.85 16.80 44.97 0.76 -0.10 16 25 F -0.19 -1.06 16.80 44.97 0.76 -0.31 16 26 C -0.13 0.69 4.74 30.59 0.15 0.84 16 27 C -0.10 1.13 5.42 30.60 0.17 1.30 16 28 C -0.10 -0.77 6.87 36.47 0.25 -0.52 16 29 N 0.03 0.53 4.45 -46.24 -0.21 0.32 16 30 O -0.19 -3.17 18.45 18.89 0.35 -2.82 16 31 O -0.17 -3.28 17.24 25.61 0.44 -2.84 16 32 C 0.00 0.02 9.11 22.25 0.20 0.22 16 33 H 0.41 -6.02 8.74 -74.05 -0.65 -6.67 16 34 H 0.10 -1.01 7.96 -2.39 -0.02 -1.03 16 35 H -0.27 1.50 7.11 99.48 0.71 2.20 16 36 H -0.28 0.84 7.11 99.48 0.71 1.55 16 37 H 0.16 -1.24 4.87 -2.91 -0.01 -1.25 16 38 H 0.20 -2.66 6.30 -2.91 -0.02 -2.67 16 39 H 0.15 -1.65 7.65 -2.38 -0.02 -1.67 16 40 H 0.15 -1.63 7.67 -2.39 -0.02 -1.65 16 41 H 0.12 -0.83 8.13 -2.38 -0.02 -0.85 16 42 H 0.12 -0.77 7.84 -2.39 -0.02 -0.79 16 43 H 0.07 -0.43 8.14 -2.38 -0.02 -0.45 16 44 H 0.10 -1.13 8.14 -2.39 -0.02 -1.15 16 45 H 0.09 0.30 4.72 -2.39 -0.01 0.28 16 46 H 0.07 -0.09 7.80 -2.38 -0.02 -0.11 16 47 H 0.09 -0.53 7.80 -2.39 -0.02 -0.54 16 48 H 0.06 -0.08 6.85 -2.39 -0.02 -0.09 16 49 H 0.10 -1.26 7.84 -2.39 -0.02 -1.28 16 50 H 0.11 -1.57 8.14 -2.39 -0.02 -1.59 16 51 H 0.17 0.52 7.61 -2.91 -0.02 0.50 16 Total: 0.00 -36.45 437.10 6.53 -29.92 By element: Atomic # 1 Polarization: -20.96 SS G_CDS: 0.44 Total: -20.52 kcal Atomic # 6 Polarization: 7.07 SS G_CDS: 3.36 Total: 10.43 kcal Atomic # 7 Polarization: 0.53 SS G_CDS: -0.21 Total: 0.32 kcal Atomic # 8 Polarization: -12.62 SS G_CDS: -1.34 Total: -13.97 kcal Atomic # 9 Polarization: -3.30 SS G_CDS: 2.24 Total: -1.05 kcal Atomic # 14 Polarization: -7.16 SS G_CDS: 2.04 Total: -5.12 kcal Total: -36.45 6.53 -29.92 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4549112_12428076.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -267.832 kcal (2) G-P(sol) polarization free energy of solvation -36.450 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -304.281 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.534 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.915 kcal (6) G-S(sol) free energy of system = (1) + (5) -297.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds