Wall clock time and date at job start Sat Mar 6 2021 10:10:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86303 * 109.47515 * 2 1 4 4 C 1.50704 * 109.47198 * 239.99854 * 2 1 3 5 5 C 1.38236 * 119.97255 * 120.02167 * 4 2 1 6 6 C 1.38294 * 120.11373 * 179.97438 * 5 4 2 7 7 C 1.38119 * 120.05341 * 359.76428 * 6 5 4 8 8 C 1.38758 * 119.94112 * 0.51448 * 7 6 5 9 9 O 1.35903 * 120.05418 * 179.74483 * 8 7 6 10 10 C 1.42900 * 116.99818 * 359.71885 * 9 8 7 11 11 C 1.50704 * 109.47180 * 180.02562 * 10 9 8 12 12 C 1.39600 * 120.07819 * 180.02562 * 11 10 9 13 13 C 1.47731 * 120.15170 * 0.02562 * 12 11 10 14 14 O 1.21467 * 119.99417 * 359.97438 * 13 12 11 15 15 O 1.34707 * 120.00059 * 180.02562 * 13 12 11 16 16 C 1.45205 * 116.99973 * 179.97438 * 15 13 12 17 17 C 1.52995 * 109.47513 * 180.02562 * 16 15 13 18 18 H 1.08997 * 112.84608 * 43.80211 * 17 16 15 19 19 C 1.53776 * 113.61943 * 175.00369 * 17 16 15 20 20 C 1.53774 * 87.08232 * 139.97827 * 19 17 16 21 21 H 1.09006 * 113.61360 * 89.19977 * 20 19 17 22 22 O 1.42898 * 113.61921 * 220.01563 * 20 19 17 23 23 C 1.53772 * 87.08479 * 334.57034 * 20 19 17 24 24 C 1.39657 * 119.70117 * 179.70814 * 12 11 10 25 25 C 1.37916 * 119.84611 * 0.54745 * 24 12 11 26 26 C 1.38391 * 120.15142 * 359.44839 * 25 24 12 27 27 C 1.37972 * 120.07448 * 0.02562 * 11 10 9 28 28 C 1.38168 * 119.97272 * 300.00329 * 4 2 1 29 29 H 0.96699 * 113.99928 * 59.99513 * 1 2 3 30 30 H 1.09007 * 109.47046 * 120.00291 * 2 1 3 31 31 H 1.48498 * 109.99784 * 60.00062 * 3 2 1 32 32 H 1.48497 * 110.00077 * 181.31956 * 3 2 1 33 33 H 1.08003 * 119.94533 * 359.97438 * 5 4 2 34 34 H 1.08003 * 119.97041 * 180.02562 * 6 5 4 35 35 H 1.07996 * 120.02832 * 180.27997 * 7 6 5 36 36 H 1.08997 * 109.47065 * 60.00852 * 10 9 8 37 37 H 1.09003 * 109.47322 * 300.00325 * 10 9 8 38 38 H 1.08995 * 109.47261 * 300.00975 * 16 15 13 39 39 H 1.09006 * 109.46619 * 59.99956 * 16 15 13 40 40 H 1.08996 * 113.61229 * 254.53393 * 19 17 16 41 41 H 1.09001 * 113.61277 * 25.43261 * 19 17 16 42 42 H 0.96703 * 114.00575 * 180.02562 * 22 20 19 43 43 H 1.08999 * 113.61775 * 270.88200 * 23 20 19 44 44 H 1.08998 * 113.61809 * 139.98177 * 23 20 19 45 45 H 1.07998 * 120.07555 * 180.27325 * 24 12 11 46 46 H 1.08002 * 119.92771 * 179.73272 * 25 24 12 47 47 H 1.07998 * 119.85156 * 180.30165 * 26 25 24 48 48 H 1.08004 * 119.92078 * 0.04295 * 27 11 10 49 49 H 1.08005 * 120.02405 * 0.04418 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 2.7264 -0.0383 -2.1398 6 6 3.1894 -0.6875 -3.2697 7 6 2.8623 -2.0112 -3.4897 8 6 2.0596 -2.6865 -2.5814 9 8 1.7320 -3.9875 -2.7982 10 6 2.2440 -4.5961 -3.9855 11 6 1.7798 -6.0282 -4.0562 12 6 2.1554 -6.8330 -5.1332 13 6 3.0092 -6.2848 -6.2069 14 8 3.3857 -5.1312 -6.1540 15 8 3.3694 -7.0640 -7.2451 16 6 4.2089 -6.4587 -8.2635 17 6 4.5112 -7.4887 -9.3537 18 1 3.6336 -8.0651 -9.6464 19 6 5.2955 -6.9131 -10.5447 20 6 6.0964 -8.2259 -10.5506 21 1 5.6537 -9.0046 -11.1718 22 8 7.4918 -8.0441 -10.7993 23 6 5.7480 -8.3535 -9.0583 24 6 1.7257 -8.1607 -5.1877 25 6 0.9249 -8.6647 -4.1844 26 6 0.5563 -7.8614 -3.1196 27 6 0.9826 -6.5467 -3.0566 28 6 1.5971 -2.0333 -1.4486 29 1 -0.3933 0.4418 -0.7650 30 1 1.7923 -0.5139 0.8900 31 1 1.5616 2.4678 1.2085 32 1 3.5346 1.7702 -0.0321 33 1 2.9864 0.9958 -1.9676 34 1 3.8108 -0.1602 -3.9784 35 1 3.2279 -2.5192 -4.3699 36 1 3.3335 -4.5676 -3.9676 37 1 1.8805 -4.0532 -4.8579 38 1 3.6902 -5.6067 -8.7028 39 1 5.1423 -6.1223 -7.8121 40 1 4.6883 -6.7679 -11.4381 41 1 5.8938 -6.0379 -10.2914 42 1 8.0008 -8.8663 -10.8046 43 1 6.4699 -7.8721 -8.3986 44 1 5.5062 -9.3712 -8.7518 45 1 2.0163 -8.7900 -6.0159 46 1 0.5883 -9.6901 -4.2275 47 1 -0.0670 -8.2625 -2.3341 48 1 0.6908 -5.9249 -2.2232 49 1 0.9755 -2.5579 -0.7380 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_4557136_11354868.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 10:10:41 Heat of formation + Delta-G solvation = -116.970594 kcal Electronic energy + Delta-G solvation = -32420.995467 eV Core-core repulsion = 27860.205584 eV Total energy + Delta-G solvation = -4560.789883 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.154 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -41.93829 -41.19455 -40.52117 -39.83358 -38.91112 -37.57338 -37.19321 -36.05164 -33.40912 -32.63622 -32.38590 -30.95792 -29.70852 -27.87705 -26.87948 -26.62413 -25.26838 -23.82971 -23.49386 -23.09269 -21.95145 -21.70357 -20.69572 -19.07392 -19.02149 -18.69473 -18.09092 -17.73116 -17.60219 -17.33642 -16.98592 -16.91305 -16.54229 -16.49473 -16.08055 -15.87312 -15.71282 -15.32645 -15.20865 -15.05721 -14.83210 -14.49668 -14.32004 -14.11159 -14.01165 -13.69220 -13.60856 -13.58125 -13.31621 -12.95143 -12.90004 -12.79304 -12.51947 -12.45926 -12.29155 -12.24520 -12.09659 -11.89830 -11.73734 -11.63801 -11.32549 -11.28392 -10.85336 -10.46203 -10.17031 -9.94612 -9.82759 -9.17114 -5.00041 -0.44516 0.19820 0.28793 0.47672 1.31094 1.46126 1.47450 1.66725 1.96321 2.10834 2.61457 2.75241 3.07439 3.29842 3.40103 3.44996 3.49531 3.53754 3.69293 3.73265 3.79108 3.82447 3.87811 3.94125 4.06912 4.11912 4.13320 4.21832 4.25632 4.29147 4.32747 4.33663 4.37804 4.47598 4.52123 4.59360 4.63734 4.64751 4.65459 4.69022 4.83868 4.88453 4.98270 5.02821 5.10919 5.16104 5.25020 5.30646 5.37404 5.37817 5.45791 5.51215 5.70319 5.76173 6.43310 6.59817 6.61073 6.63919 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.693 3.307 4 C -0.083 4.083 5 C -0.156 4.156 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.133 3.867 9 O -0.317 6.317 10 C 0.104 3.896 11 C -0.026 4.026 12 C -0.125 4.125 13 C 0.510 3.490 14 O -0.507 6.507 15 O -0.348 6.348 16 C 0.081 3.919 17 C -0.111 4.111 18 H 0.107 0.893 19 C -0.120 4.120 20 C 0.076 3.924 21 H 0.086 0.914 22 O -0.560 6.560 23 C -0.164 4.164 24 C -0.058 4.058 25 C -0.132 4.132 26 C -0.078 4.078 27 C -0.112 4.112 28 C -0.125 4.125 29 H 0.380 0.620 30 H 0.115 0.885 31 H -0.255 1.255 32 H -0.258 1.258 33 H 0.128 0.872 34 H 0.130 0.870 35 H 0.134 0.866 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.076 0.924 39 H 0.075 0.925 40 H 0.082 0.918 41 H 0.095 0.905 42 H 0.381 0.619 43 H 0.091 0.909 44 H 0.075 0.925 45 H 0.142 0.858 46 H 0.135 0.865 47 H 0.134 0.866 48 H 0.144 0.856 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.940 -3.068 -3.593 4.817 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.595 3.405 4 C -0.083 4.083 5 C -0.174 4.174 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.088 3.912 9 O -0.231 6.231 10 C 0.029 3.971 11 C -0.026 4.026 12 C -0.127 4.127 13 C 0.356 3.644 14 O -0.397 6.397 15 O -0.265 6.265 16 C 0.007 3.993 17 C -0.130 4.130 18 H 0.125 0.875 19 C -0.158 4.158 20 C 0.017 3.983 21 H 0.103 0.897 22 O -0.365 6.365 23 C -0.202 4.202 24 C -0.076 4.076 25 C -0.150 4.150 26 C -0.096 4.096 27 C -0.129 4.129 28 C -0.144 4.144 29 H 0.227 0.773 30 H 0.132 0.868 31 H -0.180 1.180 32 H -0.183 1.183 33 H 0.145 0.855 34 H 0.148 0.852 35 H 0.152 0.848 36 H 0.107 0.893 37 H 0.108 0.892 38 H 0.094 0.906 39 H 0.094 0.906 40 H 0.100 0.900 41 H 0.113 0.887 42 H 0.228 0.772 43 H 0.110 0.890 44 H 0.093 0.907 45 H 0.160 0.840 46 H 0.153 0.847 47 H 0.152 0.848 48 H 0.161 0.839 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -0.523 -1.953 -2.561 3.263 hybrid contribution 0.479 -1.207 -0.131 1.305 sum -0.044 -3.160 -2.692 4.152 Atomic orbital electron populations 1.86503 1.16966 1.81721 1.49243 1.25101 0.85336 1.10204 0.97328 0.94593 0.80996 0.77926 0.87009 1.20118 0.97679 0.93930 0.96608 1.20924 1.01038 0.99794 0.95594 1.20926 0.97803 0.93729 0.96643 1.21437 1.02889 0.96494 1.01235 1.18942 0.94617 0.83109 0.94507 1.85952 1.71199 1.22779 1.43156 1.21709 0.99274 0.89722 0.86345 1.19613 0.95916 0.93891 0.93229 1.18780 1.03579 0.95568 0.94724 1.21136 0.78153 0.83877 0.81261 1.90817 1.53315 1.18251 1.77333 1.86518 1.63681 1.44310 1.31979 1.23125 0.93895 0.95868 0.86407 1.22375 0.98322 0.97543 0.94721 0.87452 1.23071 0.97116 0.97954 0.97620 1.23283 0.82031 0.98090 0.94873 0.89663 1.86529 1.19085 1.36371 1.94560 1.23796 0.97318 1.01014 0.98092 1.21438 0.94373 0.93265 0.98502 1.21270 0.98626 1.00779 0.94295 1.21560 0.97011 0.93484 0.97587 1.21047 0.97300 0.95733 0.98860 1.20220 1.03197 0.93990 0.96998 0.77315 0.86771 1.18004 1.18299 0.85483 0.85205 0.84787 0.89285 0.89217 0.90565 0.90619 0.89982 0.88694 0.77162 0.89035 0.90665 0.84027 0.84694 0.84780 0.83850 0.84845 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.51 12.77 -35.23 -0.45 -0.96 16 2 C -0.07 -0.04 2.82 36.01 0.10 0.06 16 3 Si 0.69 -0.33 29.79 -169.99 -5.06 -5.39 16 4 C -0.08 -0.11 5.39 -104.65 -0.56 -0.68 16 5 C -0.16 -0.11 8.67 -39.56 -0.34 -0.45 16 6 C -0.07 -0.07 10.04 -39.60 -0.40 -0.47 16 7 C -0.20 -0.42 9.04 -39.43 -0.36 -0.77 16 8 C 0.13 0.39 6.69 -39.22 -0.26 0.13 16 9 O -0.32 -0.92 8.62 -19.44 -0.17 -1.09 16 10 C 0.10 0.23 3.38 36.01 0.12 0.35 16 11 C -0.03 -0.05 5.91 -104.21 -0.62 -0.66 16 12 C -0.13 -0.19 5.87 -104.98 -0.62 -0.81 16 13 C 0.51 1.19 7.88 34.61 0.27 1.46 16 14 O -0.51 -1.94 13.20 -19.24 -0.25 -2.20 16 15 O -0.35 -0.40 9.47 -40.51 -0.38 -0.79 16 16 C 0.08 0.00 5.31 37.16 0.20 0.19 16 17 C -0.11 0.17 4.02 -89.81 -0.36 -0.19 16 18 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 19 C -0.12 0.15 7.47 -25.93 -0.19 -0.05 16 20 C 0.08 -0.09 5.21 -25.93 -0.14 -0.23 16 21 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 22 O -0.56 -0.15 13.67 -35.23 -0.48 -0.63 16 23 C -0.16 0.22 7.46 -25.92 -0.19 0.03 16 24 C -0.06 0.01 9.62 -39.17 -0.38 -0.36 16 25 C -0.13 0.15 10.03 -39.64 -0.40 -0.25 16 26 C -0.08 0.06 10.04 -39.49 -0.40 -0.34 16 27 C -0.11 -0.09 9.37 -39.64 -0.37 -0.46 16 28 C -0.13 -0.32 9.55 -39.44 -0.38 -0.69 16 29 H 0.38 -1.09 8.70 45.56 0.40 -0.70 16 30 H 0.11 0.11 7.96 -51.92 -0.41 -0.30 16 31 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 32 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 33 H 0.13 -0.16 4.87 -52.48 -0.26 -0.41 16 34 H 0.13 -0.14 8.06 -52.48 -0.42 -0.56 16 35 H 0.13 0.21 6.30 -52.49 -0.33 -0.12 16 36 H 0.09 0.23 6.85 -51.93 -0.36 -0.13 16 37 H 0.09 0.22 6.88 -51.93 -0.36 -0.14 16 38 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 39 H 0.08 0.02 7.84 -51.93 -0.41 -0.38 16 40 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 41 H 0.09 -0.04 8.10 -51.93 -0.42 -0.46 16 42 H 0.38 -1.42 9.12 45.56 0.42 -1.00 16 43 H 0.09 -0.04 7.90 -51.93 -0.41 -0.45 16 44 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 45 H 0.14 -0.24 7.61 -52.49 -0.40 -0.64 16 46 H 0.14 -0.45 8.06 -52.49 -0.42 -0.87 16 47 H 0.13 -0.38 8.06 -52.49 -0.42 -0.81 16 48 H 0.14 0.08 7.00 -52.48 -0.37 -0.29 16 49 H 0.13 0.32 8.06 -52.48 -0.42 -0.11 16 LS Contribution 407.57 15.07 6.14 6.14 Total: 0.00 -7.91 407.57 -11.83 -19.74 By element: Atomic # 1 Polarization: -4.72 SS G_CDS: -5.91 Total: -10.63 kcal Atomic # 6 Polarization: 1.07 SS G_CDS: -5.26 Total: -4.20 kcal Atomic # 8 Polarization: -3.93 SS G_CDS: -1.74 Total: -5.67 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.06 Total: -5.39 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -7.91 -11.83 -19.74 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4557136_11354868.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.234 kcal (2) G-P(sol) polarization free energy of solvation -7.906 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.139 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.737 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.971 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds