Wall clock time and date at job start Sat Mar 6 2021 07:48:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.46915 * 2 1 4 4 C 1.50699 * 109.46972 * 119.99751 * 2 1 3 5 5 C 1.38368 * 119.84836 * 244.72792 * 4 2 1 6 6 C 1.37948 * 120.14778 * 179.72290 * 5 4 2 7 7 C 1.39619 * 119.84902 * 0.55170 * 6 5 4 8 8 C 1.47730 * 120.15030 * 179.74772 * 7 6 5 9 9 O 1.21477 * 119.99845 * 179.97438 * 8 7 6 10 10 O 1.34705 * 120.00074 * 359.97438 * 8 7 6 11 11 C 1.45195 * 117.00155 * 180.02562 * 10 8 7 12 12 C 1.52997 * 109.47206 * 179.97438 * 11 10 8 13 13 H 1.09007 * 109.47275 * 179.97438 * 12 11 10 14 14 O 1.42967 * 109.47070 * 299.99725 * 12 11 10 15 15 C 1.43096 * 113.77037 * 178.79357 * 14 12 11 16 16 C 1.53262 * 108.94378 * 302.03159 * 15 14 12 17 17 H 1.08994 * 109.68215 * 294.65408 * 16 15 14 18 18 N 1.46493 * 109.57546 * 174.33139 * 16 15 14 19 19 C 1.34526 * 124.46155 * 300.33786 * 18 16 15 20 20 O 1.21449 * 125.70862 * 0.03458 * 19 18 16 21 21 C 1.47814 * 108.58111 * 179.90593 * 19 18 16 22 22 C 1.40947 * 105.88215 * 0.34854 * 21 19 18 23 23 C 1.38565 * 119.82136 * 179.79856 * 22 21 19 24 24 C 1.38606 * 119.72160 * 359.97438 * 23 22 21 25 25 C 1.38228 * 120.45951 * 0.02562 * 24 23 22 26 26 C 1.38568 * 134.29807 * 180.10252 * 21 19 18 27 27 C 1.34524 * 124.46283 * 120.63968 * 18 16 15 28 28 O 1.21454 * 125.70666 * 359.96308 * 27 18 16 29 29 C 1.53266 * 108.84353 * 54.52400 * 16 15 14 30 30 O 1.42965 * 109.47585 * 59.99946 * 12 11 10 31 31 C 1.39635 * 119.70493 * 359.72058 * 7 6 5 32 32 C 1.37948 * 119.84096 * 0.02562 * 31 7 6 33 33 H 0.96696 * 114.00036 * 60.00219 * 1 2 3 34 34 H 1.09000 * 109.47187 * 239.99852 * 2 1 3 35 35 H 1.48504 * 110.00018 * 298.67819 * 3 2 1 36 36 H 1.48496 * 110.00262 * 59.99721 * 3 2 1 37 37 H 1.07999 * 119.92451 * 0.02562 * 5 4 2 38 38 H 1.08004 * 120.07222 * 180.27427 * 6 5 4 39 39 H 1.09004 * 109.47351 * 299.99489 * 11 10 8 40 40 H 1.09004 * 109.47654 * 59.99618 * 11 10 8 41 41 H 1.09000 * 109.55933 * 182.19273 * 15 14 12 42 42 H 1.09000 * 109.64898 * 61.92393 * 15 14 12 43 43 H 1.08002 * 120.13745 * 179.97438 * 23 22 21 44 44 H 1.08001 * 119.77220 * 180.02562 * 24 23 22 45 45 H 1.08006 * 119.77180 * 180.02562 * 25 24 23 46 46 H 1.07998 * 120.14220 * 0.25072 * 26 21 19 47 47 H 1.08997 * 109.55751 * 185.64014 * 29 16 15 48 48 H 1.08994 * 109.64614 * 65.36639 * 29 16 15 49 49 H 1.07989 * 120.08122 * 180.02562 * 31 7 6 50 50 H 1.07998 * 119.92126 * 179.97438 * 32 31 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6439 -0.0097 2.1875 6 6 3.1017 -0.6525 3.3190 7 6 2.8545 -2.0157 3.4918 8 6 3.3464 -2.7120 4.6982 9 8 3.1293 -3.8980 4.8460 10 8 4.0357 -2.0317 5.6345 11 6 4.4888 -2.7801 6.7932 12 6 5.2476 -1.8466 7.7386 13 1 5.5874 -2.4085 8.6087 14 8 6.3763 -1.2934 7.0575 15 6 7.1395 -0.3808 7.8529 16 6 6.2254 0.7577 8.3189 17 1 5.8933 1.3377 7.4579 18 7 6.9567 1.6270 9.2438 19 6 7.4976 1.2184 10.4058 20 8 7.4581 0.0876 10.8472 21 6 8.1506 2.3753 11.0539 22 6 7.9403 3.4700 10.1914 23 6 8.4371 4.7187 10.5291 24 6 9.1375 4.8822 11.7139 25 6 9.3438 3.8086 12.5598 26 6 8.8531 2.5536 12.2349 27 6 7.1708 2.9402 9.0459 28 8 6.7948 3.5830 8.0864 29 6 5.0097 0.1559 9.0323 30 8 4.3819 -0.7907 8.1621 31 6 2.1396 -2.7180 2.5194 32 6 1.6831 -2.0616 1.3952 33 1 -0.3933 0.4417 -0.7650 34 1 1.7924 -0.5139 -0.8900 35 1 1.5879 2.4585 -1.2243 36 1 1.5614 2.4679 1.2084 37 1 2.8380 1.0439 2.0506 38 1 3.6540 -0.1034 4.0673 39 1 3.6283 -3.2023 7.3123 40 1 5.1493 -3.5850 6.4705 41 1 7.9561 0.0274 7.2574 42 1 7.5451 -0.9014 8.7203 43 1 8.2793 5.5610 9.8717 44 1 9.5247 5.8552 11.9781 45 1 9.8907 3.9487 13.4806 46 1 9.0170 1.7184 12.8998 47 1 4.3032 0.9480 9.2804 48 1 5.3314 -0.3451 9.9452 49 1 1.9445 -3.7724 2.6470 50 1 1.1304 -2.6036 0.6421 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_479212_13594054.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:48:16 Heat of formation + Delta-G solvation = -162.372397 kcal Electronic energy + Delta-G solvation = -40500.956818 eV Core-core repulsion = 35006.267068 eV Total energy + Delta-G solvation = -5494.689751 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.133 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -43.69305 -41.65318 -41.08451 -40.11924 -39.82941 -39.59721 -37.79703 -37.35911 -37.04765 -36.97399 -34.57406 -33.15688 -32.38173 -32.15034 -31.69945 -29.89945 -27.58342 -27.41708 -26.36139 -25.50097 -24.41029 -23.75160 -23.58112 -23.34187 -22.36152 -21.60214 -21.00733 -19.14758 -19.05711 -19.01403 -18.77876 -18.60425 -18.23553 -17.74353 -17.60948 -17.15615 -17.04541 -16.95050 -16.66665 -16.51771 -16.25942 -16.08119 -16.06217 -15.63744 -15.57406 -15.25778 -15.25055 -15.18394 -14.69642 -14.68558 -14.56887 -14.41644 -14.37866 -13.99841 -13.97092 -13.79423 -13.55151 -13.43425 -13.24321 -12.88691 -12.72947 -12.52324 -12.37576 -12.15532 -12.11896 -11.74831 -11.71918 -11.67936 -11.59862 -11.42907 -10.87678 -10.77698 -10.58375 -10.46787 -10.43777 -10.03408 -9.94532 -4.99696 -1.18174 -0.36895 -0.27573 0.35318 0.79269 0.90497 1.20797 1.54081 1.56960 1.57438 1.65733 1.92016 2.25908 2.31481 2.36432 2.36822 2.68140 3.04966 3.19643 3.24183 3.29228 3.34975 3.50320 3.53853 3.67724 3.73075 3.78308 3.81883 3.85191 3.92294 3.94400 3.96789 4.02878 4.12740 4.15220 4.16277 4.20951 4.27072 4.34522 4.36488 4.48431 4.49680 4.52799 4.61782 4.69006 4.73737 4.87730 4.96517 4.97759 5.14178 5.26161 5.31896 5.39315 5.40743 5.42896 5.51477 5.77927 5.80323 5.96254 6.36270 6.40629 6.79977 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.082 4.082 3 Si 0.684 3.316 4 C -0.037 4.037 5 C -0.130 4.130 6 C -0.052 4.052 7 C -0.122 4.122 8 C 0.511 3.489 9 O -0.506 6.506 10 O -0.332 6.332 11 C 0.087 3.913 12 C 0.244 3.756 13 H 0.089 0.911 14 O -0.369 6.369 15 C 0.048 3.952 16 C 0.075 3.925 17 H 0.130 0.870 18 N -0.570 5.570 19 C 0.576 3.424 20 O -0.459 6.459 21 C -0.143 4.143 22 C -0.140 4.140 23 C -0.042 4.042 24 C -0.092 4.092 25 C -0.093 4.093 26 C -0.042 4.042 27 C 0.576 3.424 28 O -0.452 6.452 29 C 0.047 3.953 30 O -0.370 6.370 31 C -0.052 4.052 32 C -0.104 4.104 33 H 0.382 0.618 34 H 0.081 0.919 35 H -0.259 1.259 36 H -0.253 1.253 37 H 0.136 0.864 38 H 0.145 0.855 39 H 0.099 0.901 40 H 0.100 0.900 41 H 0.110 0.890 42 H 0.075 0.925 43 H 0.145 0.855 44 H 0.145 0.855 45 H 0.145 0.855 46 H 0.144 0.856 47 H 0.109 0.891 48 H 0.075 0.925 49 H 0.141 0.859 50 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.623 4.820 2.493 7.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.192 4.192 3 Si 0.585 3.415 4 C -0.037 4.037 5 C -0.147 4.147 6 C -0.070 4.070 7 C -0.123 4.123 8 C 0.356 3.644 9 O -0.395 6.395 10 O -0.248 6.248 11 C 0.012 3.988 12 C 0.149 3.851 13 H 0.106 0.894 14 O -0.288 6.288 15 C -0.030 4.030 16 C -0.027 4.027 17 H 0.148 0.852 18 N -0.316 5.316 19 C 0.365 3.635 20 O -0.330 6.330 21 C -0.146 4.146 22 C -0.144 4.144 23 C -0.061 4.061 24 C -0.110 4.110 25 C -0.111 4.111 26 C -0.060 4.060 27 C 0.365 3.635 28 O -0.322 6.322 29 C -0.030 4.030 30 O -0.289 6.289 31 C -0.070 4.070 32 C -0.122 4.122 33 H 0.230 0.770 34 H 0.099 0.901 35 H -0.185 1.185 36 H -0.177 1.177 37 H 0.153 0.847 38 H 0.163 0.837 39 H 0.117 0.883 40 H 0.118 0.882 41 H 0.128 0.872 42 H 0.093 0.907 43 H 0.163 0.837 44 H 0.163 0.837 45 H 0.163 0.837 46 H 0.162 0.838 47 H 0.127 0.873 48 H 0.093 0.907 49 H 0.159 0.841 50 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 5.013 4.603 2.508 7.253 hybrid contribution -0.911 -0.186 -0.090 0.934 sum 4.102 4.417 2.418 6.495 Atomic orbital electron populations 1.86590 1.17416 1.80254 1.49908 1.24884 0.84806 1.11296 0.98182 0.94951 0.91643 0.74403 0.80483 1.19565 0.95683 0.94056 0.94412 1.21003 0.99749 1.00038 0.93915 1.21445 0.95831 0.92907 0.96786 1.19118 1.04659 0.94537 0.93980 1.21183 0.75108 0.85278 0.82814 1.90859 1.54879 1.16097 1.77651 1.86633 1.65830 1.42283 1.30066 1.23107 0.99187 0.92603 0.83857 1.23670 0.81388 0.87247 0.92782 0.89421 1.88257 1.39888 1.59979 1.40708 1.23021 0.93513 0.89266 0.97160 1.22660 0.93438 0.92973 0.93643 0.85176 1.46453 1.52130 1.11273 1.21709 1.18459 0.77107 0.88023 0.79885 1.90818 1.55331 1.20803 1.66037 1.20465 1.02840 0.93745 0.97582 1.20471 1.02384 0.95629 0.95883 1.20868 0.93628 0.95298 0.96279 1.21561 0.96365 1.00082 0.93019 1.21560 0.97796 0.91779 1.00014 1.20860 0.93170 0.98265 0.93729 1.18410 0.78351 0.80835 0.85865 1.90858 1.48194 1.61891 1.31290 1.23028 0.94226 0.93172 0.92585 1.88258 1.36972 1.37831 1.65825 1.21324 0.93370 1.00683 0.91670 1.20973 0.99580 0.93801 0.97891 0.76983 0.90063 1.18455 1.17720 0.84687 0.83691 0.88290 0.88242 0.87193 0.90704 0.83749 0.83696 0.83711 0.83803 0.87255 0.90708 0.84094 0.84653 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.53 12.81 -35.23 -0.45 -0.98 16 2 C -0.08 0.02 2.79 36.01 0.10 0.13 16 3 Si 0.68 -0.68 29.83 -169.99 -5.07 -5.75 16 4 C -0.04 -0.05 5.39 -104.53 -0.56 -0.61 16 5 C -0.13 -0.11 8.65 -39.64 -0.34 -0.45 16 6 C -0.05 -0.08 9.62 -39.17 -0.38 -0.46 16 7 C -0.12 -0.35 5.87 -104.98 -0.62 -0.97 16 8 C 0.51 2.12 7.90 34.61 0.27 2.39 16 9 O -0.51 -3.10 16.14 -19.25 -0.31 -3.41 16 10 O -0.33 -1.12 9.27 -47.09 -0.44 -1.56 16 11 C 0.09 0.12 5.56 37.16 0.21 0.33 16 12 C 0.24 0.28 3.59 37.16 0.13 0.41 16 13 H 0.09 -0.07 8.14 -51.93 -0.42 -0.50 16 14 O -0.37 -0.73 10.44 -63.30 -0.66 -1.39 16 15 C 0.05 0.03 6.32 37.29 0.24 0.26 16 16 C 0.07 0.05 3.08 -67.66 -0.21 -0.16 16 17 H 0.13 0.16 7.59 -51.93 -0.39 -0.24 16 18 N -0.57 -0.40 2.53 -110.22 -0.28 -0.68 16 19 C 0.58 0.50 7.35 -12.46 -0.09 0.41 16 20 O -0.46 -1.17 15.16 5.41 0.08 -1.08 16 21 C -0.14 0.07 6.40 -104.83 -0.67 -0.60 16 22 C -0.14 0.05 6.41 -104.83 -0.67 -0.62 16 23 C -0.04 0.10 10.09 -39.33 -0.40 -0.30 16 24 C -0.09 0.37 10.03 -39.45 -0.40 -0.02 16 25 C -0.09 0.38 10.04 -39.45 -0.40 -0.02 16 26 C -0.04 0.10 10.09 -39.32 -0.40 -0.29 16 27 C 0.58 0.79 8.02 -12.46 -0.10 0.69 16 28 O -0.45 -1.74 17.44 5.41 0.09 -1.64 16 29 C 0.05 0.03 6.32 37.30 0.24 0.27 16 30 O -0.37 -0.81 10.44 -63.30 -0.66 -1.47 16 31 C -0.05 -0.12 9.60 -39.17 -0.38 -0.49 16 32 C -0.10 -0.15 9.66 -39.64 -0.38 -0.53 16 33 H 0.38 -1.15 8.74 45.56 0.40 -0.75 16 34 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 35 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 36 H -0.25 -0.54 7.05 56.52 0.40 -0.14 16 37 H 0.14 -0.13 4.85 -52.49 -0.25 -0.38 16 38 H 0.15 0.08 7.61 -52.48 -0.40 -0.32 16 39 H 0.10 0.06 8.14 -51.93 -0.42 -0.36 16 40 H 0.10 0.05 8.14 -51.93 -0.42 -0.38 16 41 H 0.11 -0.04 8.14 -51.93 -0.42 -0.46 16 42 H 0.07 0.05 6.67 -51.93 -0.35 -0.30 16 43 H 0.14 -0.52 8.06 -52.49 -0.42 -0.94 16 44 H 0.15 -0.93 8.06 -52.49 -0.42 -1.35 16 45 H 0.15 -0.93 8.06 -52.48 -0.42 -1.35 16 46 H 0.14 -0.55 8.06 -52.49 -0.42 -0.97 16 47 H 0.11 -0.01 8.14 -51.93 -0.42 -0.43 16 48 H 0.07 0.06 6.68 -51.93 -0.35 -0.29 16 49 H 0.14 0.24 7.65 -52.49 -0.40 -0.16 16 50 H 0.14 0.01 8.06 -52.49 -0.42 -0.41 16 LS Contribution 429.74 15.07 6.48 6.48 Total: 0.00 -10.69 429.74 -11.60 -22.30 By element: Atomic # 1 Polarization: -4.58 SS G_CDS: -5.59 Total: -10.16 kcal Atomic # 6 Polarization: 4.17 SS G_CDS: -4.80 Total: -0.64 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -0.28 Total: -0.68 kcal Atomic # 8 Polarization: -9.20 SS G_CDS: -2.34 Total: -11.55 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.07 Total: -5.75 kcal Total LS contribution 6.48 Total: 6.48 kcal Total: -10.69 -11.60 -22.30 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_479212_13594054.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.077 kcal (2) G-P(sol) polarization free energy of solvation -10.691 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -150.768 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.604 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.296 kcal (6) G-S(sol) free energy of system = (1) + (5) -162.372 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds