Wall clock time and date at job start Sat Mar 6 2021 08:22:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47127 * 2 1 4 4 C 1.52999 * 109.47317 * 119.99511 * 2 1 3 5 5 O 1.42895 * 109.47503 * 239.99913 * 2 1 3 6 6 C 1.42899 * 113.99963 * 59.99687 * 5 2 1 7 7 H 1.08997 * 112.84984 * 18.80718 * 6 5 2 8 8 C 1.53789 * 113.61207 * 150.00347 * 6 5 2 9 9 C 1.53785 * 87.07963 * 139.98392 * 8 6 5 10 10 H 1.08991 * 113.61397 * 89.19955 * 9 8 6 11 11 C 1.53006 * 113.61113 * 220.02147 * 9 8 6 12 12 O 1.45203 * 109.46598 * 184.99832 * 11 9 8 13 13 C 1.34714 * 116.99486 * 179.97438 * 12 11 9 14 14 O 1.21473 * 119.99961 * 359.97438 * 13 12 11 15 15 C 1.47730 * 119.99882 * 180.02562 * 13 12 11 16 16 C 1.39630 * 120.14694 * 359.71823 * 15 13 12 17 17 C 1.37943 * 119.84421 * 179.72753 * 16 15 13 18 18 C 1.38365 * 120.15038 * 0.57782 * 17 16 15 19 19 C 1.50703 * 119.84890 * 179.71932 * 18 17 16 20 20 O 1.42911 * 109.46915 * 119.97754 * 19 18 17 21 21 Si 1.86296 * 109.47000 * 359.97438 * 19 18 17 22 22 C 1.38365 * 120.30308 * 359.69935 * 18 17 16 23 23 C 1.37945 * 120.14969 * 0.02562 * 22 18 17 24 24 C 1.53783 * 87.08079 * 334.56393 * 9 8 6 25 25 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 26 26 H 1.09001 * 109.46832 * 60.00321 * 1 2 3 27 27 H 1.09004 * 109.47261 * 300.00303 * 1 2 3 28 28 H 1.08993 * 109.46955 * 60.00011 * 3 2 1 29 29 H 1.09000 * 109.47050 * 179.97438 * 3 2 1 30 30 H 1.09001 * 109.47002 * 299.99574 * 3 2 1 31 31 H 1.09002 * 109.46716 * 60.00091 * 4 2 1 32 32 H 1.09000 * 109.47486 * 180.02562 * 4 2 1 33 33 H 1.09001 * 109.47362 * 300.00732 * 4 2 1 34 34 H 1.08997 * 113.61447 * 254.53073 * 8 6 5 35 35 H 1.08992 * 113.61339 * 25.35090 * 8 6 5 36 36 H 1.08998 * 109.46931 * 304.99551 * 11 9 8 37 37 H 1.08995 * 109.47370 * 65.00011 * 11 9 8 38 38 H 1.07996 * 120.07699 * 0.02976 * 16 15 13 39 39 H 1.08007 * 119.92260 * 180.27890 * 17 16 15 40 40 H 1.08996 * 109.47256 * 239.97854 * 19 18 17 41 41 H 0.96699 * 113.99714 * 180.02562 * 20 19 18 42 42 H 1.48503 * 109.99964 * 298.67608 * 21 19 18 43 43 H 1.48504 * 110.00430 * 59.99888 * 21 19 18 44 44 H 1.08002 * 119.92590 * 180.02562 * 22 18 17 45 45 H 1.08001 * 120.07387 * 180.02562 * 23 22 18 46 46 H 1.08997 * 113.61910 * 270.88880 * 24 9 8 47 47 H 1.09001 * 113.61039 * 139.98184 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7211 1.2493 5 8 2.0064 -0.6736 -1.1667 6 6 1.5847 -0.0774 -2.3950 7 1 1.2523 0.9535 -2.2729 8 6 2.5838 -0.2700 -3.5481 9 6 1.3668 -0.5005 -4.4596 10 1 0.9747 0.4142 -4.9039 11 6 1.5714 -1.6185 -5.4840 12 8 0.4218 -1.6803 -6.3688 13 6 0.4440 -2.6181 -7.3356 14 8 1.3977 -3.3636 -7.4369 15 6 -0.6911 -2.7393 -8.2734 16 6 -1.7911 -1.8873 -8.1567 17 6 -2.8451 -2.0022 -9.0392 18 6 -2.8192 -2.9669 -10.0307 19 6 -3.9772 -3.0906 -10.9872 20 8 -3.5155 -2.8822 -12.3236 21 14 -5.2670 -1.8129 -10.5694 22 6 -1.7349 -3.8183 -10.1484 23 6 -0.6717 -3.7106 -9.2761 24 6 0.6078 -0.9505 -3.2001 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 0.5139 0.8900 28 1 1.6767 1.9563 0.8899 29 1 3.1300 1.4425 0.0005 30 1 1.6767 1.9564 -0.8900 31 1 1.6767 -1.7488 1.2493 32 1 3.1300 -0.7207 1.2495 33 1 1.6766 -0.2073 2.1393 34 1 3.1478 0.6302 -3.7922 35 1 3.2182 -1.1489 -3.4339 36 1 2.4691 -1.4162 -6.0681 37 1 1.6822 -2.5707 -4.9653 38 1 -1.8145 -1.1368 -7.3805 39 1 -3.6946 -1.3408 -8.9529 40 1 -4.4123 -4.0865 -10.9042 41 1 -4.2094 -2.9470 -12.9940 42 1 -5.7781 -2.0383 -9.1934 43 1 -4.6864 -0.4504 -10.6787 44 1 -1.7209 -4.5688 -10.9248 45 1 0.1743 -4.3756 -9.3693 46 1 0.7010 -2.0162 -2.9915 47 1 -0.4235 -0.5995 -3.1632 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_479212_14598394.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:22:06 Heat of formation + Delta-G solvation = -113.808183 kcal Electronic energy + Delta-G solvation = -26528.150425 eV Core-core repulsion = 22643.546810 eV Total energy + Delta-G solvation = -3884.603616 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.171 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.68055 -40.90732 -40.18614 -38.55147 -37.65915 -37.14197 -33.92764 -33.20343 -32.24939 -29.84455 -28.43101 -28.38741 -27.47702 -26.68361 -24.30116 -23.86644 -23.25137 -21.71676 -20.89472 -20.65753 -19.02999 -18.53445 -18.25155 -17.69901 -17.39869 -16.89367 -16.62202 -16.56741 -16.03240 -15.90767 -15.66977 -15.23245 -14.87807 -14.72117 -14.58325 -14.37629 -14.10441 -13.94620 -13.72587 -13.53093 -13.49377 -13.36285 -13.14784 -13.05712 -12.84902 -12.70362 -12.54486 -12.41619 -12.21852 -12.20512 -12.03458 -11.87930 -11.77293 -11.43296 -11.35320 -11.19563 -10.53292 -10.37641 -10.16166 -10.00339 -5.06212 -0.47749 0.21045 1.15684 1.45514 1.55948 1.57177 1.87251 2.58885 2.68436 3.19141 3.35745 3.48049 3.53043 3.66893 3.68879 3.72452 3.82292 3.83929 3.87451 3.93960 4.04335 4.08099 4.13966 4.19988 4.23736 4.36422 4.44392 4.47418 4.52859 4.60182 4.61749 4.71241 4.72412 4.75373 4.78408 4.82545 4.86043 4.88478 4.94919 5.02640 5.06600 5.10020 5.17952 5.26067 5.27673 5.28124 5.33522 5.43868 5.65134 6.38727 6.49358 6.74686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.104 3.896 3 C -0.179 4.179 4 C -0.139 4.139 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.127 4.127 9 C -0.112 4.112 10 H 0.105 0.895 11 C 0.081 3.919 12 O -0.351 6.351 13 C 0.510 3.490 14 O -0.502 6.502 15 C -0.123 4.123 16 C -0.054 4.054 17 C -0.138 4.138 18 C -0.039 4.039 19 C -0.079 4.079 20 O -0.544 6.544 21 Si 0.685 3.315 22 C -0.100 4.100 23 C -0.051 4.051 24 C -0.149 4.149 25 H 0.064 0.936 26 H 0.058 0.942 27 H 0.066 0.934 28 H 0.068 0.932 29 H 0.065 0.935 30 H 0.059 0.941 31 H 0.063 0.937 32 H 0.064 0.936 33 H 0.071 0.929 34 H 0.079 0.921 35 H 0.095 0.905 36 H 0.075 0.925 37 H 0.076 0.924 38 H 0.143 0.857 39 H 0.127 0.873 40 H 0.081 0.919 41 H 0.385 0.615 42 H -0.253 1.253 43 H -0.249 1.249 44 H 0.140 0.860 45 H 0.143 0.857 46 H 0.091 0.909 47 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.169 1.786 -0.516 5.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.065 3.935 3 C -0.236 4.236 4 C -0.196 4.196 5 O -0.280 6.280 6 C 0.004 3.996 7 H 0.111 0.889 8 C -0.164 4.164 9 C -0.130 4.130 10 H 0.123 0.877 11 C 0.007 3.993 12 O -0.268 6.268 13 C 0.355 3.645 14 O -0.391 6.391 15 C -0.124 4.124 16 C -0.072 4.072 17 C -0.156 4.156 18 C -0.039 4.039 19 C -0.189 4.189 20 O -0.350 6.350 21 Si 0.586 3.414 22 C -0.118 4.118 23 C -0.069 4.069 24 C -0.186 4.186 25 H 0.083 0.917 26 H 0.077 0.923 27 H 0.085 0.915 28 H 0.087 0.913 29 H 0.084 0.916 30 H 0.078 0.922 31 H 0.082 0.918 32 H 0.083 0.917 33 H 0.089 0.911 34 H 0.097 0.903 35 H 0.113 0.887 36 H 0.094 0.906 37 H 0.094 0.906 38 H 0.161 0.839 39 H 0.144 0.856 40 H 0.098 0.902 41 H 0.233 0.767 42 H -0.178 1.178 43 H -0.173 1.173 44 H 0.158 0.842 45 H 0.161 0.839 46 H 0.110 0.890 47 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -4.397 2.155 0.364 4.910 hybrid contribution 0.390 -0.142 0.158 0.444 sum -4.007 2.013 0.522 4.515 Atomic orbital electron populations 1.22470 0.95473 1.02924 1.02503 1.21545 0.93241 0.92087 0.86584 1.22472 1.02354 0.96266 1.02553 1.21770 1.02031 1.00922 0.94904 1.88042 1.73804 1.53441 1.12738 1.23565 0.95579 0.96991 0.83423 0.88939 1.23233 0.96339 1.03465 0.93376 1.22367 0.98795 0.98674 0.93156 0.87654 1.23121 0.86397 0.99621 0.90122 1.86516 1.45672 1.53312 1.41289 1.21104 0.86188 0.77814 0.79426 1.90861 1.34769 1.42259 1.71192 1.19155 0.94296 1.00870 0.98053 1.21373 0.91357 0.96947 0.97506 1.20877 0.99201 0.98700 0.96800 1.19695 0.95248 0.94641 0.94363 1.24776 1.00576 1.08410 0.85161 1.86488 1.39104 1.94974 1.14478 0.95168 0.83380 0.78390 0.84450 1.20999 0.92384 0.99611 0.98846 1.21377 0.98461 0.95385 0.91693 1.23639 0.99050 1.01582 0.94373 0.91671 0.92303 0.91520 0.91341 0.91577 0.92238 0.91753 0.91739 0.91053 0.90283 0.88655 0.90643 0.90589 0.83918 0.85585 0.90158 0.76690 1.17778 1.17304 0.84239 0.83879 0.89022 0.90884 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.07 8.38 37.16 0.31 0.38 16 2 C 0.10 0.04 1.11 -90.62 -0.10 -0.06 16 3 C -0.18 0.10 8.38 37.16 0.31 0.41 16 4 C -0.14 0.01 8.84 37.16 0.33 0.33 16 5 O -0.36 -0.71 10.00 -35.23 -0.35 -1.06 16 6 C 0.06 0.01 2.82 -25.91 -0.07 -0.06 16 7 H 0.09 -0.08 5.54 -51.93 -0.29 -0.36 16 8 C -0.13 0.05 7.47 -25.91 -0.19 -0.15 16 9 C -0.11 0.04 4.02 -89.80 -0.36 -0.32 16 10 H 0.11 -0.10 8.14 -51.93 -0.42 -0.52 16 11 C 0.08 0.11 5.31 37.16 0.20 0.31 16 12 O -0.35 -0.96 9.47 -40.53 -0.38 -1.34 16 13 C 0.51 2.11 7.90 34.61 0.27 2.38 16 14 O -0.50 -3.27 16.14 -19.24 -0.31 -3.58 16 15 C -0.12 -0.36 5.87 -104.98 -0.62 -0.98 16 16 C -0.05 -0.09 9.62 -39.17 -0.38 -0.47 16 17 C -0.14 -0.24 8.65 -39.64 -0.34 -0.58 16 18 C -0.04 -0.06 5.43 -104.53 -0.57 -0.63 16 19 C -0.08 0.07 2.81 36.01 0.10 0.17 16 20 O -0.54 0.34 12.74 -35.23 -0.45 -0.11 16 21 Si 0.69 -1.27 29.77 -169.99 -5.06 -6.33 16 22 C -0.10 -0.16 9.59 -39.64 -0.38 -0.54 16 23 C -0.05 -0.12 9.60 -39.17 -0.38 -0.50 16 24 C -0.15 -0.01 7.46 -25.92 -0.19 -0.20 16 25 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 26 H 0.06 -0.04 7.02 -51.93 -0.36 -0.40 16 27 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 30 H 0.06 -0.06 6.24 -51.93 -0.32 -0.38 16 31 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 33 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 35 H 0.09 0.02 8.10 -51.93 -0.42 -0.40 16 36 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 37 H 0.08 0.13 7.84 -51.93 -0.41 -0.28 16 38 H 0.14 0.02 7.61 -52.49 -0.40 -0.38 16 39 H 0.13 0.10 4.86 -52.48 -0.25 -0.16 16 40 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 41 H 0.39 -2.17 8.74 45.56 0.40 -1.77 16 42 H -0.25 -0.12 7.11 56.52 0.40 0.29 16 43 H -0.25 -0.34 7.11 56.52 0.40 0.07 16 44 H 0.14 0.00 8.06 -52.49 -0.42 -0.42 16 45 H 0.14 0.25 7.65 -52.49 -0.40 -0.15 16 46 H 0.09 0.09 7.90 -51.93 -0.41 -0.32 16 47 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 LS Contribution 382.69 15.07 5.77 5.77 Total: 0.00 -7.04 382.69 -10.40 -17.44 By element: Atomic # 1 Polarization: -2.72 SS G_CDS: -7.56 Total: -10.28 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -2.06 Total: -0.50 kcal Atomic # 8 Polarization: -4.60 SS G_CDS: -1.50 Total: -6.10 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.06 Total: -6.33 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -7.04 -10.40 -17.44 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_479212_14598394.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.366 kcal (2) G-P(sol) polarization free energy of solvation -7.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.404 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.442 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.808 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds