Wall clock time and date at job start Sat Mar 6 2021 07:52:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53003 * 109.47167 * 2 1 4 4 C 1.52997 * 109.47202 * 239.99470 * 2 1 3 5 5 O 1.42904 * 109.46790 * 119.99667 * 2 1 3 6 6 C 1.42895 * 113.99895 * 60.00170 * 5 2 1 7 7 H 1.08994 * 112.91148 * 18.74861 * 6 5 2 8 8 C 1.53787 * 113.61204 * 150.00156 * 6 5 2 9 9 C 1.53779 * 87.07963 * 139.97889 * 8 6 5 10 10 H 1.09001 * 113.61377 * 89.20020 * 9 8 6 11 11 C 1.52998 * 113.61250 * 220.01477 * 9 8 6 12 12 O 1.45197 * 109.47274 * 185.00131 * 11 9 8 13 13 C 1.34233 * 117.00226 * 180.02562 * 12 11 9 14 14 O 1.20829 * 119.99655 * 0.02562 * 13 12 11 15 15 C 1.50702 * 119.99889 * 179.97438 * 13 12 11 16 16 O 1.42901 * 109.46642 * 180.02562 * 15 13 12 17 17 C 1.35902 * 116.99899 * 180.02562 * 16 15 13 18 18 C 1.38739 * 120.05441 * 359.72103 * 17 16 15 19 19 C 1.38148 * 119.94498 * 179.74437 * 18 17 16 20 20 C 1.38270 * 120.05152 * 0.51216 * 19 18 17 21 21 C 1.50702 * 119.94023 * 179.74413 * 20 19 18 22 22 O 1.42896 * 109.46751 * 245.02267 * 21 20 19 23 23 Si 1.86299 * 109.47286 * 5.02274 * 21 20 19 24 24 C 1.38264 * 120.11497 * 359.76549 * 20 19 18 25 25 C 1.38146 * 120.05492 * 359.97438 * 24 20 19 26 26 C 1.53779 * 87.08402 * 334.56577 * 9 8 6 27 27 H 1.08998 * 109.47657 * 300.00681 * 1 2 3 28 28 H 1.09010 * 109.46818 * 60.00243 * 1 2 3 29 29 H 1.08997 * 109.47442 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.47375 * 180.02562 * 3 2 1 31 31 H 1.09006 * 109.46932 * 300.00094 * 3 2 1 32 32 H 1.08998 * 109.47388 * 59.99154 * 3 2 1 33 33 H 1.08997 * 109.47278 * 300.00536 * 4 2 1 34 34 H 1.09001 * 109.47226 * 60.00508 * 4 2 1 35 35 H 1.08998 * 109.47119 * 179.97438 * 4 2 1 36 36 H 1.08997 * 113.61028 * 254.52849 * 8 6 5 37 37 H 1.08998 * 113.61447 * 25.34384 * 8 6 5 38 38 H 1.09007 * 109.47269 * 305.00322 * 11 9 8 39 39 H 1.08998 * 109.47235 * 64.99931 * 11 9 8 40 40 H 1.08999 * 109.47382 * 300.00244 * 15 13 12 41 41 H 1.08999 * 109.46924 * 60.00374 * 15 13 12 42 42 H 1.08001 * 120.02808 * 0.02562 * 18 17 16 43 43 H 1.07998 * 119.97216 * 180.23747 * 19 18 17 44 44 H 1.09002 * 109.46754 * 125.02536 * 21 20 19 45 45 H 0.96705 * 113.99903 * 179.97438 * 22 21 20 46 46 H 1.48491 * 109.99830 * 178.68178 * 23 21 20 47 47 H 1.48501 * 109.99842 * 300.00320 * 23 21 20 48 48 H 1.08000 * 119.97520 * 179.97438 * 24 20 19 49 49 H 1.07999 * 120.03297 * 179.97438 * 25 24 20 50 50 H 1.09002 * 113.61557 * 270.88569 * 26 9 8 51 51 H 1.09004 * 113.61501 * 139.97990 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2491 5 8 2.0063 -0.6736 1.1669 6 6 1.5846 -2.0354 1.2646 7 1 1.2512 -2.4458 0.3115 8 6 2.5836 -2.9377 2.0081 9 6 1.3666 -3.6117 2.6634 10 1 0.9744 -4.4540 2.0933 11 6 1.5710 -3.9399 4.1437 12 8 0.4215 -4.6753 4.6396 13 6 0.4430 -5.0415 5.9309 14 8 1.3909 -4.7565 6.6239 15 6 -0.7155 -5.8070 6.5164 16 8 -0.4589 -6.0777 7.8959 17 6 -1.4121 -6.7663 8.5772 18 6 -2.5731 -7.1682 7.9327 19 6 -3.5382 -7.8727 8.6261 20 6 -3.3524 -8.1682 9.9640 21 6 -4.4094 -8.9318 10.7194 22 8 -4.9655 -8.0960 11.7363 23 14 -5.7551 -9.4581 9.5434 24 6 -2.1988 -7.7638 10.6101 25 6 -1.2284 -7.0637 9.9198 26 6 0.6075 -2.2961 2.4232 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5139 -0.8901 29 1 -0.3634 -1.0276 0.0005 30 1 3.1300 1.4426 -0.0005 31 1 1.6766 1.9564 -0.8900 32 1 1.6766 1.9564 0.8899 33 1 1.6766 -1.7490 -1.2491 34 1 1.6768 -0.2076 -2.1392 35 1 3.1300 -0.7209 -1.2494 36 1 3.1476 -3.5992 1.3505 37 1 3.2180 -2.3993 2.7122 38 1 2.4688 -4.5470 4.2607 39 1 1.6819 -3.0147 4.7090 40 1 -1.6256 -5.2141 6.4260 41 1 -0.8391 -6.7468 5.9783 42 1 -2.7203 -6.9344 6.8887 43 1 -4.4404 -8.1890 8.1238 44 1 -3.9623 -9.8137 11.1782 45 1 -5.6546 -8.5233 12.2634 46 1 -6.7877 -10.2394 10.2702 47 1 -6.3726 -8.2646 8.9113 48 1 -2.0563 -7.9955 11.6553 49 1 -0.3276 -6.7477 10.4249 50 1 0.7007 -1.5825 3.2419 51 1 -0.4238 -2.4396 2.1007 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_479556_14598394.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:52:36 Heat of formation + Delta-G solvation = -143.449301 kcal Electronic energy + Delta-G solvation = -29961.929055 eV Core-core repulsion = 25601.820293 eV Total energy + Delta-G solvation = -4360.108762 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.186 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.84155 -41.18209 -40.73130 -39.18249 -38.51884 -37.44098 -37.12106 -33.93290 -32.53494 -31.86744 -30.74325 -29.15060 -28.43372 -28.27921 -26.70924 -26.23609 -24.33354 -23.65549 -22.48846 -21.84885 -20.90776 -20.66088 -19.65518 -18.56873 -18.37289 -18.15726 -18.01546 -17.63234 -16.84861 -16.80666 -16.73320 -16.46208 -15.96216 -15.74694 -15.69480 -15.35018 -14.79826 -14.66166 -14.52807 -14.46176 -14.14594 -13.99679 -13.91294 -13.57708 -13.53033 -13.46001 -13.37295 -13.15584 -13.06946 -12.85682 -12.70936 -12.50703 -12.43694 -12.28360 -12.22623 -11.96134 -11.89650 -11.81535 -11.69912 -11.40863 -11.37482 -11.22561 -10.49997 -10.38907 -10.02723 -9.23780 -5.00048 0.27943 0.31488 0.96517 1.07258 1.25714 1.56085 1.92191 2.37862 2.61065 2.68099 3.28070 3.35129 3.43869 3.50797 3.66333 3.69869 3.77125 3.79599 3.80351 3.83747 3.85568 3.92117 3.92687 4.02922 4.05681 4.16053 4.25345 4.33984 4.37463 4.43966 4.46165 4.52249 4.60169 4.64595 4.69096 4.71625 4.73397 4.77582 4.85290 4.87776 4.93372 4.95560 5.05739 5.08204 5.14989 5.22290 5.24603 5.26521 5.30260 5.35709 5.52332 5.65764 6.21612 6.37631 6.42724 6.64595 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.104 3.896 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.127 4.127 9 C -0.111 4.111 10 H 0.106 0.894 11 C 0.082 3.918 12 O -0.352 6.352 13 C 0.464 3.536 14 O -0.482 6.482 15 C 0.068 3.932 16 O -0.293 6.293 17 C 0.133 3.867 18 C -0.204 4.204 19 C -0.073 4.073 20 C -0.108 4.108 21 C -0.072 4.072 22 O -0.536 6.536 23 Si 0.681 3.319 24 C -0.050 4.050 25 C -0.143 4.143 26 C -0.149 4.149 27 H 0.064 0.936 28 H 0.066 0.934 29 H 0.058 0.942 30 H 0.063 0.937 31 H 0.071 0.929 32 H 0.063 0.937 33 H 0.059 0.941 34 H 0.068 0.932 35 H 0.065 0.935 36 H 0.079 0.921 37 H 0.095 0.905 38 H 0.077 0.923 39 H 0.077 0.923 40 H 0.109 0.891 41 H 0.110 0.890 42 H 0.135 0.865 43 H 0.131 0.869 44 H 0.076 0.924 45 H 0.379 0.621 46 H -0.261 1.261 47 H -0.256 1.256 48 H 0.134 0.866 49 H 0.137 0.863 50 H 0.091 0.909 51 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.221 -3.021 -4.909 6.177 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.065 3.935 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.280 6.280 6 C 0.004 3.996 7 H 0.111 0.889 8 C -0.164 4.164 9 C -0.130 4.130 10 H 0.125 0.875 11 C 0.009 3.991 12 O -0.269 6.269 13 C 0.304 3.696 14 O -0.367 6.367 15 C -0.008 4.008 16 O -0.207 6.207 17 C 0.089 3.911 18 C -0.223 4.223 19 C -0.091 4.091 20 C -0.108 4.108 21 C -0.181 4.181 22 O -0.344 6.344 23 Si 0.583 3.417 24 C -0.068 4.068 25 C -0.162 4.162 26 C -0.187 4.187 27 H 0.083 0.917 28 H 0.085 0.915 29 H 0.077 0.923 30 H 0.083 0.917 31 H 0.089 0.911 32 H 0.083 0.917 33 H 0.078 0.922 34 H 0.087 0.913 35 H 0.084 0.916 36 H 0.098 0.902 37 H 0.114 0.886 38 H 0.095 0.905 39 H 0.095 0.905 40 H 0.126 0.874 41 H 0.128 0.872 42 H 0.152 0.848 43 H 0.149 0.851 44 H 0.094 0.906 45 H 0.227 0.773 46 H -0.187 1.187 47 H -0.180 1.180 48 H 0.152 0.848 49 H 0.155 0.845 50 H 0.110 0.890 51 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -2.018 -2.263 -4.976 5.827 hybrid contribution -0.622 0.125 0.843 1.055 sum -2.640 -2.138 -4.133 5.350 Atomic orbital electron populations 1.22470 0.95452 1.02509 1.02934 1.21548 0.93252 0.93295 0.85361 1.21772 1.02032 0.93205 1.02631 1.22469 1.02352 1.00834 0.97983 1.88045 1.73810 1.23219 1.42919 1.23560 0.95549 0.82919 0.97561 0.88900 1.23238 0.96331 0.97355 0.99517 1.22374 0.98863 0.98190 0.93548 0.87535 1.23166 0.86168 0.95933 0.93876 1.86418 1.46154 1.67932 1.26398 1.22857 0.87724 0.78084 0.80904 1.90753 1.34637 1.50729 1.60570 1.21893 0.95511 1.01205 0.82229 1.86095 1.42401 1.70785 1.21393 1.18994 0.87705 0.92519 0.91926 1.21175 0.94904 1.05085 1.01106 1.20776 0.98363 0.96364 0.93604 1.19175 0.95543 1.02468 0.93654 1.24737 1.01686 0.95364 0.96362 1.86600 1.57366 1.42273 1.48132 0.95121 0.79098 0.83359 0.84136 1.20840 0.91690 0.94636 0.99678 1.20503 1.01538 1.02675 0.91464 1.23649 0.99102 0.96247 0.99702 0.91671 0.91519 0.92285 0.91741 0.91055 0.91749 0.92223 0.91344 0.91583 0.90238 0.88645 0.90500 0.90477 0.87378 0.87245 0.84751 0.85145 0.90608 0.77277 1.18661 1.18040 0.84836 0.84541 0.89013 0.90804 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.15 8.38 37.16 0.31 0.46 16 2 C 0.10 -0.01 1.11 -90.62 -0.10 -0.11 16 3 C -0.14 0.05 8.84 37.16 0.33 0.38 16 4 C -0.18 0.17 8.38 37.16 0.31 0.49 16 5 O -0.36 -0.52 10.00 -35.23 -0.35 -0.88 16 6 C 0.06 -0.03 2.82 -25.91 -0.07 -0.11 16 7 H 0.09 -0.14 5.55 -51.93 -0.29 -0.43 16 8 C -0.13 0.14 7.47 -25.92 -0.19 -0.05 16 9 C -0.11 0.15 4.02 -89.81 -0.36 -0.21 16 10 H 0.11 -0.22 8.14 -51.93 -0.42 -0.65 16 11 C 0.08 0.01 5.30 37.16 0.20 0.21 16 12 O -0.35 -0.28 10.22 -39.27 -0.40 -0.68 16 13 C 0.46 0.95 8.03 36.01 0.29 1.24 16 14 O -0.48 -2.85 16.25 -25.48 -0.41 -3.26 16 15 C 0.07 -0.04 5.33 36.01 0.19 0.15 16 16 O -0.29 -0.77 9.67 -39.39 -0.38 -1.15 16 17 C 0.13 0.24 6.69 -39.21 -0.26 -0.02 16 18 C -0.20 -0.01 9.04 -39.43 -0.36 -0.36 16 19 C -0.07 -0.02 8.66 -39.60 -0.34 -0.36 16 20 C -0.11 -0.12 5.38 -104.60 -0.56 -0.69 16 21 C -0.07 0.01 2.79 36.01 0.10 0.11 16 22 O -0.54 -0.64 12.81 -35.23 -0.45 -1.09 16 23 Si 0.68 -0.78 29.85 -169.99 -5.07 -5.85 16 24 C -0.05 -0.07 9.68 -39.61 -0.38 -0.45 16 25 C -0.14 -0.27 9.99 -39.43 -0.39 -0.66 16 26 C -0.15 0.12 7.46 -25.92 -0.19 -0.08 16 27 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 28 H 0.07 -0.10 8.14 -51.92 -0.42 -0.52 16 29 H 0.06 -0.07 7.02 -51.93 -0.36 -0.43 16 30 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 32 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.06 -0.09 6.25 -51.93 -0.32 -0.41 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 35 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 36 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 37 H 0.10 -0.04 8.10 -51.93 -0.42 -0.46 16 38 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 39 H 0.08 0.06 7.84 -51.93 -0.41 -0.35 16 40 H 0.11 -0.31 7.65 -51.93 -0.40 -0.71 16 41 H 0.11 -0.37 7.67 -51.93 -0.40 -0.76 16 42 H 0.13 -0.38 6.30 -52.49 -0.33 -0.71 16 43 H 0.13 -0.21 4.86 -52.49 -0.26 -0.46 16 44 H 0.08 -0.14 7.96 -51.93 -0.41 -0.56 16 45 H 0.38 -1.05 8.74 45.56 0.40 -0.65 16 46 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 47 H -0.26 -0.48 7.05 56.52 0.40 -0.08 16 48 H 0.13 0.03 8.06 -52.49 -0.42 -0.40 16 49 H 0.14 0.16 8.06 -52.49 -0.42 -0.27 16 50 H 0.09 0.02 7.90 -51.93 -0.41 -0.39 16 51 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 LS Contribution 413.84 15.07 6.24 6.24 Total: 0.00 -8.48 413.84 -10.64 -19.12 By element: Atomic # 1 Polarization: -4.08 SS G_CDS: -8.31 Total: -12.39 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -1.49 Total: -0.06 kcal Atomic # 8 Polarization: -5.06 SS G_CDS: -2.00 Total: -7.06 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.07 Total: -5.85 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -8.48 -10.64 -19.12 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_479556_14598394.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.331 kcal (2) G-P(sol) polarization free energy of solvation -8.480 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.811 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.638 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.118 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.449 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds