Wall clock time and date at job start Sat Mar 6 2021 09:01:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.42894 * 114.00377 * 2 1 4 4 C 1.53005 * 112.84849 * 65.98917 * 3 2 1 5 5 F 1.39899 * 109.47139 * 283.52256 * 4 3 2 6 6 F 1.39899 * 109.46930 * 43.52269 * 4 3 2 7 7 F 1.39900 * 109.46975 * 163.51933 * 4 3 2 8 8 C 1.53776 * 113.61620 * 294.79297 * 3 2 1 9 9 C 1.53779 * 87.08300 * 270.79802 * 8 3 2 10 10 H 1.08999 * 113.61286 * 219.93487 * 9 8 3 11 11 C 1.52995 * 113.61398 * 89.11722 * 9 8 3 12 12 O 1.45199 * 109.47521 * 176.53154 * 11 9 8 13 13 C 1.34223 * 117.00610 * 180.02562 * 12 11 9 14 14 O 1.20833 * 119.99841 * 359.97438 * 13 12 11 15 15 C 1.50702 * 120.00462 * 179.97438 * 13 12 11 16 16 O 1.42893 * 109.47353 * 180.02562 * 15 13 12 17 17 C 1.35900 * 117.00034 * 180.02562 * 16 15 13 18 18 C 1.38731 * 120.05395 * 179.97438 * 17 16 15 19 19 C 1.38146 * 119.94246 * 179.97438 * 18 17 16 20 20 C 1.38267 * 120.05630 * 0.26173 * 19 18 17 21 21 C 1.50697 * 119.94625 * 179.71927 * 20 19 18 22 22 O 1.42902 * 109.47056 * 300.00027 * 21 20 19 23 23 Si 1.86301 * 109.47196 * 179.97438 * 21 20 19 24 24 C 1.38264 * 120.10930 * 359.48750 * 20 19 18 25 25 C 1.38149 * 120.05633 * 0.50660 * 24 20 19 26 26 C 1.53781 * 87.17405 * 334.52551 * 9 8 3 27 27 H 1.09001 * 109.47182 * 62.52804 * 1 2 3 28 28 H 1.09000 * 109.47345 * 182.52789 * 1 2 3 29 29 H 1.09000 * 109.47146 * 302.53347 * 1 2 3 30 30 H 1.08998 * 113.61552 * 156.25034 * 8 3 2 31 31 H 1.09003 * 113.61597 * 25.35101 * 8 3 2 32 32 H 1.09002 * 109.47744 * 56.52330 * 11 9 8 33 33 H 1.09008 * 109.47058 * 296.53056 * 11 9 8 34 34 H 1.09001 * 109.46610 * 59.99497 * 15 13 12 35 35 H 1.08997 * 109.46769 * 300.00040 * 15 13 12 36 36 H 1.07999 * 120.03061 * 0.02562 * 18 17 16 37 37 H 1.08006 * 119.97538 * 179.97438 * 19 18 17 38 38 H 1.09007 * 109.46986 * 59.99867 * 21 20 19 39 39 H 0.96708 * 113.99883 * 179.97438 * 22 21 20 40 40 H 1.48498 * 109.99808 * 60.00342 * 23 21 20 41 41 H 1.48498 * 109.99624 * 181.31976 * 23 21 20 42 42 H 1.07995 * 119.97270 * 180.25971 * 24 20 19 43 43 H 1.07998 * 120.02743 * 179.77074 * 25 24 20 44 44 H 1.08994 * 113.61460 * 140.02112 * 26 9 8 45 45 H 1.09000 * 113.61178 * 270.92921 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7278 2.0815 1.2880 5 9 0.4114 2.5548 1.2681 6 9 1.9031 1.2368 2.3893 7 9 2.6107 3.1625 1.3842 8 6 1.7211 2.1085 -1.2791 9 6 2.9981 1.4841 -1.8658 10 1 3.5936 2.1808 -2.4556 11 6 2.7565 0.1542 -2.5827 12 8 4.0000 -0.3122 -3.1695 13 6 3.9594 -1.4744 -3.8398 14 8 2.9192 -2.0822 -3.9327 15 6 5.2110 -2.0213 -4.4765 16 8 4.9133 -3.2586 -5.1264 17 6 5.9408 -3.8885 -5.7544 18 6 5.7229 -5.0941 -6.4053 19 6 6.7689 -5.7321 -7.0434 20 6 8.0333 -5.1728 -7.0292 21 6 9.1739 -5.8741 -7.7207 22 8 9.3607 -7.1664 -7.1401 23 14 10.7316 -4.8718 -7.5212 24 6 8.2520 -3.9688 -6.3857 25 6 7.2092 -3.3267 -5.7461 26 6 3.4927 1.3228 -0.4186 27 1 -0.3633 0.4741 -0.9118 28 1 -0.3634 -1.0267 0.0453 29 1 -0.3633 0.5527 0.8664 30 1 1.7864 3.1877 -1.1412 31 1 0.8094 1.8007 -1.7913 32 1 2.0140 0.2945 -3.3683 33 1 2.3932 -0.5835 -1.8671 34 1 5.9669 -2.1864 -3.7086 35 1 5.5874 -1.3077 -5.2094 36 1 4.7362 -5.5331 -6.4138 37 1 6.5999 -6.6710 -7.5499 38 1 8.9449 -5.9818 -8.7810 39 1 10.0803 -7.6758 -7.5375 40 1 11.0550 -4.7173 -6.0801 41 1 11.8570 -5.5368 -8.2258 42 1 9.2395 -3.5318 -6.3795 43 1 7.3813 -2.3881 -5.2404 44 1 4.0104 0.3810 -0.2365 45 1 4.0415 2.1876 -0.0459 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_479556_17321610.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:01:58 Heat of formation + Delta-G solvation = -273.595938 kcal Electronic energy + Delta-G solvation = -34331.364524 eV Core-core repulsion = 28868.325491 eV Total energy + Delta-G solvation = -5463.039033 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.126 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -51.20160 -48.75020 -48.62923 -42.01524 -41.46929 -40.86275 -39.15565 -37.80927 -37.31830 -36.92966 -32.56608 -31.86927 -31.18188 -29.86004 -28.33508 -27.32807 -26.95132 -26.20747 -24.18771 -23.44340 -22.54887 -21.86225 -20.78053 -19.85567 -19.64314 -19.48624 -19.26693 -18.59102 -18.38343 -18.06553 -17.93011 -17.35631 -16.83596 -16.77320 -16.65396 -16.56927 -15.87012 -15.75235 -15.65989 -15.54220 -15.46629 -15.24755 -15.09923 -14.88903 -14.80256 -14.70734 -14.48427 -14.39204 -14.27288 -13.99133 -13.79051 -13.69129 -13.45245 -13.39617 -13.26594 -12.87716 -12.51625 -12.48080 -12.25467 -12.19667 -11.95633 -11.83378 -11.75243 -11.74564 -11.46288 -10.89731 -10.52025 -10.03399 -9.23440 -5.00284 0.27284 0.30637 0.90270 1.04483 1.25693 1.51633 1.56450 1.93031 1.95237 2.32428 2.49962 2.58356 2.60942 2.77527 3.08646 3.22312 3.31848 3.35591 3.50178 3.60549 3.72289 3.77909 3.79033 3.82448 3.91351 4.05415 4.08462 4.13239 4.20459 4.24776 4.27281 4.32768 4.35109 4.43191 4.44980 4.51304 4.62153 4.63240 4.64845 4.81141 4.94747 5.14204 5.23346 5.26412 5.51586 5.58124 5.65054 6.20432 6.41984 6.60960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.332 6.332 3 C 0.037 3.963 4 C 0.437 3.563 5 F -0.181 7.181 6 F -0.174 7.174 7 F -0.175 7.175 8 C -0.143 4.143 9 C -0.100 4.100 10 H 0.109 0.891 11 C 0.079 3.921 12 O -0.351 6.351 13 C 0.465 3.535 14 O -0.480 6.480 15 C 0.068 3.932 16 O -0.293 6.293 17 C 0.133 3.867 18 C -0.143 4.143 19 C -0.050 4.050 20 C -0.108 4.108 21 C -0.072 4.072 22 O -0.537 6.537 23 Si 0.679 3.321 24 C -0.073 4.073 25 C -0.204 4.204 26 C -0.112 4.112 27 H 0.055 0.945 28 H 0.103 0.897 29 H 0.055 0.945 30 H 0.114 0.886 31 H 0.096 0.904 32 H 0.078 0.922 33 H 0.095 0.905 34 H 0.109 0.891 35 H 0.110 0.890 36 H 0.137 0.863 37 H 0.134 0.866 38 H 0.076 0.924 39 H 0.380 0.620 40 H -0.255 1.255 41 H -0.261 1.261 42 H 0.132 0.868 43 H 0.135 0.865 44 H 0.099 0.901 45 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.331 3.931 -3.854 5.978 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.250 6.250 3 C -0.006 4.006 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.180 4.180 9 C -0.119 4.119 10 H 0.127 0.873 11 C 0.006 3.994 12 O -0.268 6.268 13 C 0.306 3.694 14 O -0.365 6.365 15 C -0.008 4.008 16 O -0.207 6.207 17 C 0.088 3.912 18 C -0.162 4.162 19 C -0.068 4.068 20 C -0.108 4.108 21 C -0.181 4.181 22 O -0.344 6.344 23 Si 0.581 3.419 24 C -0.090 4.090 25 C -0.222 4.222 26 C -0.149 4.149 27 H 0.074 0.926 28 H 0.121 0.879 29 H 0.074 0.926 30 H 0.133 0.867 31 H 0.114 0.886 32 H 0.096 0.904 33 H 0.113 0.887 34 H 0.127 0.873 35 H 0.128 0.872 36 H 0.154 0.846 37 H 0.152 0.848 38 H 0.094 0.906 39 H 0.228 0.772 40 H -0.180 1.180 41 H -0.187 1.187 42 H 0.149 0.851 43 H 0.153 0.847 44 H 0.118 0.882 45 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 2.184 3.766 -3.132 5.363 hybrid contribution -0.191 -0.778 0.426 0.907 sum 1.993 2.988 -2.706 4.497 Atomic orbital electron populations 1.23168 0.79301 1.04594 1.01561 1.88090 1.21315 1.21791 1.93815 1.24114 1.00071 0.86430 0.89972 1.21160 0.74308 0.78697 0.87557 1.93189 1.36947 1.89299 1.96828 1.93224 1.94947 1.70611 1.56699 1.93180 1.68800 1.57044 1.96573 1.23593 0.99550 1.01198 0.93651 1.22111 0.97769 0.96292 0.95682 0.87298 1.23067 0.83275 0.95494 0.97570 1.86366 1.38984 1.37389 1.64103 1.22834 0.90321 0.79434 0.76847 1.90756 1.32248 1.58000 1.55471 1.21884 0.93560 0.86734 0.98627 1.86090 1.33909 1.34174 1.66509 1.18980 0.86228 0.92685 0.93294 1.20505 1.00836 0.94064 1.00769 1.20836 0.90979 0.98660 0.96348 1.19186 0.94212 0.95649 1.01797 1.24734 1.05543 0.89336 0.98529 1.86594 1.56944 1.27370 1.63475 0.95191 0.75695 0.88313 0.82741 1.20722 0.98483 0.94424 0.95409 1.21168 0.92281 1.02678 1.06107 1.23328 0.90904 1.05840 0.94807 0.92613 0.87864 0.92645 0.86721 0.88580 0.90356 0.88732 0.87314 0.87223 0.84556 0.84817 0.90569 0.77244 1.17969 1.18665 0.85117 0.84706 0.88236 0.86351 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.43 101.05 1.05 1.04 16 2 O -0.33 -0.14 8.34 -35.23 -0.29 -0.43 16 3 C 0.04 -0.03 0.85 -89.66 -0.08 -0.11 16 4 C 0.44 0.33 2.51 37.16 0.09 0.42 16 5 F -0.18 -0.20 15.24 2.25 0.03 -0.17 16 6 F -0.17 -0.46 17.09 2.25 0.04 -0.42 16 7 F -0.17 -0.11 15.82 2.25 0.04 -0.08 16 8 C -0.14 0.41 6.52 -25.92 -0.17 0.24 16 9 C -0.10 0.27 4.20 -89.81 -0.38 -0.11 16 10 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 11 C 0.08 -0.06 5.06 37.16 0.19 0.13 16 12 O -0.35 0.03 10.22 -39.24 -0.40 -0.37 16 13 C 0.47 0.64 8.03 36.01 0.29 0.93 16 14 O -0.48 -2.50 16.25 -25.48 -0.41 -2.92 16 15 C 0.07 -0.08 5.33 36.01 0.19 0.11 16 16 O -0.29 -0.64 9.67 -39.38 -0.38 -1.02 16 17 C 0.13 0.19 6.69 -39.22 -0.26 -0.07 16 18 C -0.14 -0.24 9.99 -39.43 -0.39 -0.63 16 19 C -0.05 -0.06 9.60 -39.60 -0.38 -0.44 16 20 C -0.11 -0.10 5.42 -104.60 -0.57 -0.67 16 21 C -0.07 0.03 2.81 36.00 0.10 0.13 16 22 O -0.54 -0.54 12.74 -35.23 -0.45 -0.99 16 23 Si 0.68 -0.86 29.79 -169.99 -5.06 -5.93 16 24 C -0.07 0.01 8.66 -39.60 -0.34 -0.33 16 25 C -0.20 0.07 9.04 -39.43 -0.36 -0.28 16 26 C -0.11 0.23 6.92 -25.77 -0.18 0.05 16 27 H 0.06 -0.14 6.76 -51.93 -0.35 -0.49 16 28 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 29 H 0.05 -0.04 6.25 -51.93 -0.32 -0.37 16 30 H 0.11 -0.45 8.06 -51.93 -0.42 -0.86 16 31 H 0.10 -0.33 6.70 -51.93 -0.35 -0.68 16 32 H 0.08 -0.07 8.13 -51.93 -0.42 -0.49 16 33 H 0.09 0.06 6.08 -51.92 -0.32 -0.26 16 34 H 0.11 -0.37 7.66 -51.93 -0.40 -0.77 16 35 H 0.11 -0.43 7.66 -51.93 -0.40 -0.83 16 36 H 0.14 0.13 8.06 -52.49 -0.42 -0.30 16 37 H 0.13 0.03 8.06 -52.48 -0.42 -0.39 16 38 H 0.08 -0.15 7.96 -51.93 -0.41 -0.57 16 39 H 0.38 -1.11 8.74 45.56 0.40 -0.71 16 40 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 41 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 42 H 0.13 -0.28 4.87 -52.49 -0.26 -0.54 16 43 H 0.14 -0.44 6.30 -52.49 -0.33 -0.77 16 44 H 0.10 -0.16 8.10 -51.93 -0.42 -0.58 16 45 H 0.12 -0.37 7.01 -51.93 -0.36 -0.74 16 LS Contribution 384.15 15.07 5.79 5.79 Total: 0.00 -9.28 384.15 -7.54 -16.82 By element: Atomic # 1 Polarization: -5.46 SS G_CDS: -5.25 Total: -10.71 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -1.19 Total: 0.42 kcal Atomic # 8 Polarization: -3.78 SS G_CDS: -1.94 Total: -5.72 kcal Atomic # 9 Polarization: -0.77 SS G_CDS: 0.11 Total: -0.67 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.06 Total: -5.93 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -9.28 -7.54 -16.82 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_479556_17321610.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -256.778 kcal (2) G-P(sol) polarization free energy of solvation -9.277 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -266.055 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.541 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.818 kcal (6) G-S(sol) free energy of system = (1) + (5) -273.596 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds