Wall clock time and date at job start Sat Mar 6 2021 08:12:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35986 * 117.00096 * 2 1 4 4 C 1.38669 * 120.00293 * 180.02562 * 3 2 1 5 5 C 1.38152 * 120.00007 * 180.02562 * 4 3 2 6 6 C 1.50699 * 119.99838 * 180.02562 * 5 4 3 7 7 O 1.42900 * 109.47614 * 254.97708 * 6 5 4 8 8 Si 1.86295 * 109.47246 * 14.98154 * 6 5 4 9 9 C 1.38677 * 120.00095 * 359.97438 * 5 4 3 10 10 O 1.35983 * 120.00045 * 180.02562 * 9 5 4 11 11 C 1.42899 * 117.00218 * 179.97438 * 10 9 5 12 12 C 1.50698 * 109.47372 * 180.02562 * 11 10 9 13 13 O 1.20822 * 119.99804 * 0.02562 * 12 11 10 14 14 O 1.34231 * 120.00053 * 180.02562 * 12 11 10 15 15 C 1.45198 * 116.99983 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.46884 * 179.97438 * 15 14 12 17 17 H 1.08990 * 112.85361 * 45.33205 * 16 15 14 18 18 C 1.53787 * 113.61270 * 176.52983 * 16 15 14 19 19 C 1.53778 * 87.08069 * 139.97924 * 18 16 15 20 20 H 1.08994 * 113.61959 * 89.11407 * 19 18 16 21 21 O 1.42905 * 113.61034 * 219.93576 * 19 18 16 22 22 C 1.53783 * 113.61182 * 274.13256 * 16 15 14 23 23 C 1.38714 * 120.00033 * 0.27594 * 9 5 4 24 24 C 1.38113 * 120.00055 * 359.44775 * 23 9 5 25 25 H 1.09003 * 109.46955 * 59.99992 * 1 2 3 26 26 H 1.09001 * 109.46658 * 179.97438 * 1 2 3 27 27 H 1.08996 * 109.47147 * 300.00357 * 1 2 3 28 28 H 1.08004 * 119.99875 * 0.03794 * 4 3 2 29 29 H 1.09005 * 109.46969 * 134.97982 * 6 5 4 30 30 H 0.96697 * 114.00008 * 300.00438 * 7 6 5 31 31 H 1.48498 * 109.99868 * 298.67731 * 8 6 5 32 32 H 1.48498 * 110.00276 * 59.99451 * 8 6 5 33 33 H 1.09008 * 109.46611 * 59.99747 * 11 10 9 34 34 H 1.09001 * 109.47177 * 300.00705 * 11 10 9 35 35 H 1.09002 * 109.47379 * 59.99613 * 15 14 12 36 36 H 1.09001 * 109.46782 * 299.99696 * 15 14 12 37 37 H 1.09000 * 113.61079 * 254.52465 * 18 16 15 38 38 H 1.08993 * 113.61125 * 25.34288 * 18 16 15 39 39 H 0.96704 * 113.99471 * 180.02562 * 21 19 18 40 40 H 1.09003 * 113.61584 * 334.56887 * 22 16 15 41 41 H 1.09000 * 113.61286 * 105.47141 * 22 16 15 42 42 H 1.07997 * 120.00462 * 179.70198 * 23 9 5 43 43 H 1.07994 * 120.00772 * 180.25319 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0584 2.5152 0.0000 6 6 5.5633 2.5941 -0.0012 7 8 6.0219 2.9667 1.3000 8 14 6.2719 0.9326 -0.4572 9 6 3.3030 3.6783 0.0005 10 8 3.9204 4.8899 0.0005 11 6 3.0804 6.0460 0.0005 12 6 3.9346 7.2875 -0.0001 13 8 5.1390 7.1921 -0.0010 14 8 3.3573 8.4993 0.0003 15 6 4.2418 9.6508 -0.0009 16 6 3.4084 10.9340 -0.0009 17 1 2.5863 10.9047 0.7141 18 6 4.2525 12.2167 0.0831 19 6 3.2775 12.8311 -0.9350 20 1 2.4187 13.3211 -0.4765 21 8 3.9172 13.6421 -1.9227 22 6 2.9866 11.3946 -1.4062 23 6 1.9178 3.6056 0.0063 24 6 1.2908 2.3751 0.0000 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5139 0.8899 28 1 4.0194 0.3785 -0.0016 29 1 5.8875 3.3392 -0.7278 30 1 5.6915 3.8234 1.6031 31 1 5.8634 -0.0857 0.5434 32 1 5.8025 0.5338 -1.8084 33 1 2.4511 6.0378 0.8906 34 1 2.4511 6.0379 -0.8894 35 1 4.8697 9.6258 -0.8916 36 1 4.8715 9.6261 0.8884 37 1 4.2217 12.6963 1.0615 38 1 5.2666 12.0978 -0.2982 39 1 3.3090 14.0316 -2.5657 40 1 3.6536 11.0509 -2.1969 41 1 1.9354 11.2114 -1.6285 42 1 1.3296 4.5113 0.0116 43 1 0.2123 2.3184 0.0004 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_4974306_11354868.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:12:11 Heat of formation + Delta-G solvation = -176.450870 kcal Electronic energy + Delta-G solvation = -27189.596297 eV Core-core repulsion = 22975.987144 eV Total energy + Delta-G solvation = -4213.609153 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.138 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.04836 -41.50831 -40.45179 -40.02886 -38.27301 -37.50982 -36.88709 -36.07531 -32.88679 -31.54428 -30.39732 -29.02245 -28.15192 -26.90233 -26.54430 -24.34125 -23.44320 -22.48428 -22.11137 -20.71894 -19.72454 -19.00212 -18.80085 -18.43301 -18.16307 -18.12907 -17.80377 -17.15667 -16.95565 -16.70341 -16.44819 -16.05890 -15.76084 -15.56655 -15.32394 -15.09970 -14.92248 -14.35556 -14.15694 -13.95469 -13.74402 -13.63310 -13.60416 -13.43955 -13.15912 -12.89430 -12.77489 -12.54520 -12.33059 -12.27058 -12.01849 -11.80404 -11.62902 -11.56626 -11.35894 -11.13861 -10.92603 -10.87422 -10.17442 -8.92388 -4.71384 -0.01765 0.25247 0.85932 0.98475 1.48059 1.76858 2.06755 2.17029 2.29930 2.47046 3.03135 3.24546 3.34671 3.40923 3.46626 3.54966 3.64907 3.68834 3.74091 3.77013 3.88486 4.00754 4.02239 4.04166 4.06101 4.09565 4.11885 4.24413 4.31047 4.40387 4.47807 4.49308 4.56617 4.62282 4.63004 4.81257 4.95070 4.95907 5.01889 5.09580 5.15398 5.26899 5.30212 5.96114 6.28822 6.55482 6.59820 6.70263 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.316 6.316 3 C 0.106 3.894 4 C -0.115 4.115 5 C -0.094 4.094 6 C -0.077 4.077 7 O -0.533 6.533 8 Si 0.748 3.252 9 C 0.101 3.899 10 O -0.293 6.293 11 C 0.069 3.931 12 C 0.464 3.536 13 O -0.479 6.479 14 O -0.352 6.352 15 C 0.081 3.919 16 C -0.111 4.111 17 H 0.107 0.893 18 C -0.120 4.120 19 C 0.077 3.923 20 H 0.085 0.915 21 O -0.559 6.559 22 C -0.165 4.165 23 C -0.162 4.162 24 C -0.164 4.164 25 H 0.057 0.943 26 H 0.104 0.896 27 H 0.057 0.943 28 H 0.140 0.860 29 H 0.080 0.920 30 H 0.368 0.632 31 H -0.250 1.250 32 H -0.248 1.248 33 H 0.108 0.892 34 H 0.107 0.893 35 H 0.077 0.923 36 H 0.078 0.922 37 H 0.082 0.918 38 H 0.095 0.905 39 H 0.381 0.619 40 H 0.091 0.909 41 H 0.075 0.925 42 H 0.137 0.863 43 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.645 2.679 -0.805 6.300 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.061 3.939 4 C -0.134 4.134 5 C -0.095 4.095 6 C -0.185 4.185 7 O -0.338 6.338 8 Si 0.646 3.354 9 C 0.057 3.943 10 O -0.208 6.208 11 C -0.008 4.008 12 C 0.305 3.695 13 O -0.365 6.365 14 O -0.269 6.269 15 C 0.008 3.992 16 C -0.130 4.130 17 H 0.126 0.874 18 C -0.157 4.157 19 C 0.018 3.982 20 H 0.103 0.897 21 O -0.365 6.365 22 C -0.203 4.203 23 C -0.181 4.181 24 C -0.183 4.183 25 H 0.075 0.925 26 H 0.122 0.878 27 H 0.076 0.924 28 H 0.157 0.843 29 H 0.098 0.902 30 H 0.215 0.785 31 H -0.175 1.175 32 H -0.173 1.173 33 H 0.126 0.874 34 H 0.125 0.875 35 H 0.095 0.905 36 H 0.096 0.904 37 H 0.101 0.899 38 H 0.114 0.886 39 H 0.229 0.771 40 H 0.110 0.890 41 H 0.094 0.906 42 H 0.155 0.845 43 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -4.317 0.981 -0.724 4.486 hybrid contribution -2.477 1.544 -0.082 2.919 sum -6.794 2.525 -0.805 7.292 Atomic orbital electron populations 1.23123 0.77866 1.04490 1.01435 1.86119 1.21748 1.26232 1.88814 1.18819 0.91828 0.84685 0.98561 1.20129 0.91931 0.97103 1.04200 1.19489 0.96734 0.89812 1.03513 1.25230 0.90531 1.13748 0.89010 1.86706 1.73533 1.41900 1.31650 0.93081 0.91243 0.71993 0.79093 1.18540 0.90769 0.84047 1.00956 1.86037 1.34020 1.11118 1.89576 1.21871 0.91675 0.81608 1.05597 1.22804 0.87892 0.84911 0.73934 1.90757 1.15519 1.87146 1.43036 1.86414 1.41954 1.14456 1.84118 1.23173 0.91550 0.81092 1.03371 1.22385 0.99661 0.91647 0.99280 0.87445 1.23068 0.99537 0.93691 0.99433 1.23309 0.95687 0.89251 0.90003 0.89674 1.86535 1.38310 1.67981 1.43666 1.23829 1.02640 0.97019 0.96771 1.21071 0.92776 0.98868 1.05346 1.21101 1.00444 0.91389 1.05346 0.92466 0.87806 0.92437 0.84288 0.90218 0.78469 1.17543 1.17281 0.87421 0.87500 0.90456 0.90376 0.89927 0.88617 0.77145 0.89004 0.90650 0.84489 0.84453 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.82 10.50 -19.70 -0.21 -1.03 16 3 C 0.11 0.29 6.69 -39.24 -0.26 0.03 16 4 C -0.12 -0.42 8.59 -39.45 -0.34 -0.75 16 5 C -0.09 -0.30 5.28 -104.49 -0.55 -0.85 16 6 C -0.08 -0.21 2.33 36.00 0.08 -0.12 16 7 O -0.53 -1.88 12.65 -35.23 -0.45 -2.32 16 8 Si 0.75 1.05 30.40 -169.99 -5.17 -4.11 16 9 C 0.10 0.19 6.62 -39.24 -0.26 -0.07 16 10 O -0.29 -0.49 8.56 -39.64 -0.34 -0.83 16 11 C 0.07 -0.09 5.33 36.00 0.19 0.10 16 12 C 0.46 0.56 8.03 36.00 0.29 0.85 16 13 O -0.48 -2.29 16.25 -25.47 -0.41 -2.71 16 14 O -0.35 -0.06 10.22 -39.26 -0.40 -0.47 16 15 C 0.08 -0.03 5.29 37.16 0.20 0.16 16 16 C -0.11 0.20 4.01 -89.80 -0.36 -0.16 16 17 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 18 C -0.12 0.17 7.48 -25.92 -0.19 -0.02 16 19 C 0.08 -0.11 5.21 -25.83 -0.13 -0.24 16 20 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 21 O -0.56 -0.05 13.68 -35.23 -0.48 -0.54 16 22 C -0.16 0.28 7.48 -25.82 -0.19 0.09 16 23 C -0.16 -0.01 9.03 -39.45 -0.36 -0.37 16 24 C -0.16 -0.09 9.03 -39.45 -0.36 -0.45 16 25 H 0.06 -0.15 7.66 -51.93 -0.40 -0.54 16 26 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 27 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 28 H 0.14 0.51 4.93 -52.48 -0.26 0.25 16 29 H 0.08 0.18 7.82 -51.93 -0.41 -0.22 16 30 H 0.37 0.74 8.60 45.56 0.39 1.14 16 31 H -0.25 -0.92 6.81 56.52 0.38 -0.53 16 32 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 33 H 0.11 -0.40 7.65 -51.92 -0.40 -0.80 16 34 H 0.11 -0.38 7.67 -51.93 -0.40 -0.78 16 35 H 0.08 0.01 7.87 -51.93 -0.41 -0.40 16 36 H 0.08 -0.03 8.13 -51.93 -0.42 -0.45 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 38 H 0.10 -0.06 8.10 -51.93 -0.42 -0.48 16 39 H 0.38 -1.49 9.12 45.56 0.42 -1.08 16 40 H 0.09 -0.07 7.92 -51.93 -0.41 -0.48 16 41 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 42 H 0.14 -0.41 6.29 -52.49 -0.33 -0.74 16 43 H 0.14 -0.26 6.29 -52.49 -0.33 -0.59 16 LS Contribution 362.81 15.07 5.47 5.47 Total: 0.00 -8.85 362.81 -8.34 -17.19 By element: Atomic # 1 Polarization: -4.71 SS G_CDS: -5.10 Total: -9.81 kcal Atomic # 6 Polarization: 0.41 SS G_CDS: -1.25 Total: -0.84 kcal Atomic # 8 Polarization: -5.60 SS G_CDS: -2.29 Total: -7.89 kcal Atomic # 14 Polarization: 1.05 SS G_CDS: -5.17 Total: -4.11 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -8.85 -8.34 -17.19 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4974306_11354868.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -159.260 kcal (2) G-P(sol) polarization free energy of solvation -8.847 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -168.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.343 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.191 kcal (6) G-S(sol) free energy of system = (1) + (5) -176.451 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds