Wall clock time and date at job start Sat Mar 6 2021 09:08:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35897 * 117.00417 * 2 1 4 4 C 1.38616 * 120.03065 * 180.02562 * 3 2 1 5 5 C 1.38650 * 119.88831 * 180.02562 * 4 3 2 6 6 O 1.35906 * 120.02188 * 179.97438 * 5 4 3 7 7 C 1.42895 * 117.00293 * 359.97438 * 6 5 4 8 8 C 1.50693 * 109.47313 * 180.02562 * 7 6 5 9 9 O 1.20827 * 119.99972 * 359.97438 * 8 7 6 10 10 O 1.34234 * 120.00353 * 180.27743 * 8 7 6 11 11 C 1.45192 * 117.00206 * 179.72110 * 10 8 7 12 12 C 1.53002 * 109.47016 * 179.97438 * 11 10 8 13 13 H 1.08995 * 112.85073 * 43.80437 * 12 11 10 14 14 C 1.53779 * 113.61479 * 175.00022 * 12 11 10 15 15 C 1.53791 * 87.08342 * 89.11693 * 14 12 11 16 16 O 1.42900 * 113.61169 * 270.80227 * 15 14 12 17 17 C 1.42894 * 114.00071 * 294.81648 * 16 15 14 18 18 C 1.52991 * 113.61472 * 139.97922 * 15 14 12 19 19 F 1.39906 * 109.47360 * 54.76412 * 18 15 14 20 20 F 1.39903 * 109.47041 * 174.76407 * 18 15 14 21 21 F 1.39900 * 109.47690 * 294.76361 * 18 15 14 22 22 C 1.53780 * 87.07652 * 25.43258 * 15 14 12 23 23 C 1.38749 * 119.94845 * 0.24666 * 5 4 3 24 24 C 1.50709 * 119.97130 * 179.74658 * 23 5 4 25 25 O 1.42901 * 109.46604 * 75.00503 * 24 23 5 26 26 Si 1.86298 * 109.46900 * 195.00320 * 24 23 5 27 27 C 1.38194 * 120.05469 * 359.50208 * 23 5 4 28 28 C 1.38151 * 120.10788 * 0.49993 * 27 23 5 29 29 H 1.09003 * 109.47142 * 300.00151 * 1 2 3 30 30 H 1.09000 * 109.47104 * 59.99397 * 1 2 3 31 31 H 1.08997 * 109.47449 * 179.97438 * 1 2 3 32 32 H 1.07997 * 120.04726 * 0.02562 * 4 3 2 33 33 H 1.09000 * 109.47118 * 59.99401 * 7 6 5 34 34 H 1.09002 * 109.47090 * 300.00022 * 7 6 5 35 35 H 1.09001 * 109.47396 * 299.99955 * 11 10 8 36 36 H 1.09005 * 109.47342 * 60.00186 * 11 10 8 37 37 H 1.08997 * 113.61650 * 203.66469 * 14 12 11 38 38 H 1.08996 * 113.61686 * 334.48836 * 14 12 11 39 39 H 1.08995 * 109.47158 * 182.48887 * 17 16 15 40 40 H 1.09004 * 109.47091 * 302.48751 * 17 16 15 41 41 H 1.08998 * 109.47114 * 62.48355 * 17 16 15 42 42 H 1.09002 * 113.61293 * 220.01817 * 22 15 14 43 43 H 1.09006 * 113.61766 * 89.11540 * 22 15 14 44 44 H 1.08994 * 109.47318 * 315.00714 * 24 23 5 45 45 H 0.96702 * 113.99780 * 60.00192 * 25 24 23 46 46 H 1.48497 * 109.99881 * 180.02562 * 26 24 23 47 47 H 1.48499 * 110.00418 * 301.32130 * 26 24 23 48 48 H 1.08001 * 119.94345 * 180.24898 * 27 23 5 49 49 H 1.08007 * 119.97420 * 179.72880 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4303 1.2840 -0.0005 5 6 4.0567 2.5209 0.0000 6 8 5.4137 2.5958 0.0000 7 6 6.1317 1.3603 0.0000 8 6 7.6125 1.6399 0.0006 9 8 8.0120 2.7802 0.0006 10 8 8.4877 0.6221 -0.0049 11 6 9.8984 0.9658 -0.0102 12 6 10.7353 -0.3150 -0.0154 13 1 10.3571 -1.0649 -0.7101 14 6 12.2468 -0.0627 -0.1440 15 6 12.2842 0.0189 1.3913 16 8 12.0595 1.3351 1.9001 17 6 13.0806 2.2736 1.5557 18 6 13.5088 -0.6569 2.0112 19 9 14.6720 -0.1259 1.4433 20 9 13.5181 -0.4295 3.3916 21 9 13.4564 -2.0332 1.7658 22 6 11.0267 -0.8662 1.3904 23 6 3.2972 3.6820 0.0063 24 6 3.9777 5.0267 0.0126 25 8 4.5030 5.3008 -1.2878 26 14 2.7444 6.3445 0.4746 27 6 1.9173 3.6065 0.0015 28 6 1.2907 2.3753 0.0010 29 1 -0.3633 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3634 -1.0276 -0.0005 32 1 4.0196 0.3790 -0.0014 33 1 5.8699 0.7880 -0.8899 34 1 5.8700 0.7880 0.8900 35 1 10.1261 1.5526 -0.9001 36 1 10.1335 1.5494 0.8799 37 1 12.7981 -0.9110 -0.5497 38 1 12.4921 0.8771 -0.6385 39 1 12.8592 3.2366 2.0157 40 1 14.0435 1.9115 1.9162 41 1 13.1181 2.3883 0.4724 42 1 10.2868 -0.5744 2.1358 43 1 11.2443 -1.9343 1.4041 44 1 4.7905 5.0192 0.7387 45 1 3.8339 5.3228 -1.9856 46 1 3.4029 7.6754 0.4839 47 1 1.6151 6.3438 -0.4896 48 1 1.3279 4.5115 0.0024 49 1 0.2121 2.3188 0.0018 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_4974316_17321610.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:08:03 Heat of formation + Delta-G solvation = -306.450382 kcal Electronic energy + Delta-G solvation = -39539.754564 eV Core-core repulsion = 33601.071044 eV Total energy + Delta-G solvation = -5938.683519 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.141 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -51.18512 -48.73306 -48.61212 -42.04626 -41.70034 -41.04947 -40.03524 -38.48173 -37.69137 -37.00274 -36.85881 -32.34126 -31.77686 -30.93316 -29.68379 -28.54563 -28.30456 -27.25366 -26.92306 -26.10760 -24.03913 -23.36061 -22.53064 -22.04436 -20.75817 -20.08281 -19.78902 -19.47514 -19.25472 -18.63606 -18.36766 -18.05884 -17.93271 -17.34800 -17.23166 -17.22316 -16.93944 -16.60203 -16.54442 -16.41249 -15.90706 -15.81461 -15.65305 -15.52526 -15.48660 -15.19486 -15.14704 -15.00172 -14.82541 -14.76520 -14.64354 -14.49655 -14.30396 -13.96142 -13.72726 -13.55732 -13.43017 -13.41969 -13.25574 -13.17376 -12.84399 -12.64459 -12.44322 -12.30760 -12.17155 -12.02120 -11.80661 -11.73989 -11.70340 -11.57465 -11.42246 -10.87788 -10.41750 -9.74121 -9.12676 -4.91078 0.17783 0.28647 0.92029 1.09735 1.36382 1.53420 1.60403 1.97522 2.02350 2.10503 2.35364 2.51870 2.54759 2.60089 2.80139 3.11292 3.24823 3.37730 3.53109 3.54502 3.64469 3.67802 3.76853 3.81054 3.83723 3.97577 4.01762 4.08114 4.11097 4.13219 4.16273 4.22048 4.22773 4.29527 4.34282 4.35759 4.38000 4.46259 4.51001 4.53667 4.64481 4.66634 4.72605 4.83793 5.00194 5.19420 5.24644 5.30839 5.40819 5.60284 6.05252 6.28870 6.58816 6.66075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.314 6.314 3 C 0.175 3.825 4 C -0.246 4.246 5 C 0.193 3.807 6 O -0.278 6.278 7 C 0.066 3.934 8 C 0.465 3.535 9 O -0.476 6.476 10 O -0.352 6.352 11 C 0.080 3.920 12 C -0.100 4.100 13 H 0.109 0.891 14 C -0.143 4.143 15 C 0.037 3.963 16 O -0.332 6.332 17 C 0.009 3.991 18 C 0.437 3.563 19 F -0.181 7.181 20 F -0.174 7.174 21 F -0.175 7.175 22 C -0.112 4.112 23 C -0.180 4.180 24 C -0.060 4.060 25 O -0.522 6.522 26 Si 0.687 3.313 27 C -0.043 4.043 28 C -0.237 4.237 29 H 0.060 0.940 30 H 0.058 0.942 31 H 0.103 0.897 32 H 0.141 0.859 33 H 0.109 0.891 34 H 0.110 0.890 35 H 0.078 0.922 36 H 0.095 0.905 37 H 0.114 0.886 38 H 0.096 0.904 39 H 0.103 0.897 40 H 0.055 0.945 41 H 0.055 0.945 42 H 0.099 0.901 43 H 0.118 0.882 44 H 0.118 0.882 45 H 0.370 0.630 46 H -0.257 1.257 47 H -0.260 1.260 48 H 0.139 0.861 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.621 -3.291 -0.445 5.691 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.227 6.227 3 C 0.129 3.871 4 C -0.265 4.265 5 C 0.147 3.853 6 O -0.190 6.190 7 C -0.011 4.011 8 C 0.305 3.695 9 O -0.360 6.360 10 O -0.269 6.269 11 C 0.007 3.993 12 C -0.119 4.119 13 H 0.127 0.873 14 C -0.180 4.180 15 C -0.005 4.005 16 O -0.250 6.250 17 C -0.086 4.086 18 C 0.383 3.617 19 F -0.163 7.163 20 F -0.155 7.155 21 F -0.156 7.156 22 C -0.149 4.149 23 C -0.181 4.181 24 C -0.170 4.170 25 O -0.327 6.327 26 Si 0.589 3.411 27 C -0.060 4.060 28 C -0.256 4.256 29 H 0.079 0.921 30 H 0.077 0.923 31 H 0.122 0.878 32 H 0.158 0.842 33 H 0.127 0.873 34 H 0.128 0.872 35 H 0.096 0.904 36 H 0.113 0.887 37 H 0.132 0.868 38 H 0.114 0.886 39 H 0.121 0.879 40 H 0.073 0.927 41 H 0.074 0.926 42 H 0.118 0.882 43 H 0.136 0.864 44 H 0.136 0.864 45 H 0.217 0.783 46 H -0.182 1.182 47 H -0.186 1.186 48 H 0.156 0.844 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -4.210 -2.160 -0.224 4.737 hybrid contribution 0.530 -0.448 -1.163 1.354 sum -3.680 -2.607 -1.387 4.719 Atomic orbital electron populations 1.23155 0.77550 1.04480 1.01778 1.86083 1.22051 1.26600 1.87921 1.18689 0.91439 0.84434 0.92523 1.20418 0.93045 0.97357 1.15711 1.18314 0.81325 0.92540 0.93128 1.86185 1.15256 1.29418 1.88127 1.21924 0.86404 0.86902 1.05847 1.22777 0.88926 0.83739 0.74053 1.90770 1.79914 1.22590 1.42740 1.86368 1.18319 1.37913 1.84323 1.23055 0.75383 0.96512 1.04392 1.22112 0.93786 0.97591 0.98366 0.87299 1.23602 0.96344 1.05432 0.92656 1.24049 0.93475 0.87342 0.95661 1.88092 1.46009 1.15725 1.75163 1.23166 0.91214 0.93108 1.01123 1.21161 0.85628 0.77608 0.77321 1.93190 1.52508 1.85833 1.84737 1.93224 1.96713 1.94250 1.31293 1.93180 1.96429 1.31936 1.94058 1.23286 0.93938 0.99401 0.98300 1.19503 0.92734 0.94304 1.11583 1.24829 1.06004 0.97758 0.88415 1.86694 1.36990 1.92674 1.16383 0.95151 0.77612 0.78147 0.90201 1.20785 0.92639 0.97939 0.94683 1.21142 1.00508 0.91752 1.12173 0.92132 0.92297 0.87833 0.84155 0.87287 0.87183 0.90396 0.88737 0.86751 0.88590 0.87858 0.92658 0.92629 0.88226 0.86353 0.86449 0.78329 1.18193 1.18587 0.84370 0.84703 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.31 -0.19 10.49 -19.42 -0.20 -0.39 16 3 C 0.18 0.14 6.68 -39.23 -0.26 -0.12 16 4 C -0.25 -0.18 8.97 -39.29 -0.35 -0.54 16 5 C 0.19 0.35 6.66 -39.24 -0.26 0.09 16 6 O -0.28 -0.77 8.99 -39.40 -0.35 -1.12 16 7 C 0.07 -0.02 5.33 36.00 0.19 0.17 16 8 C 0.46 0.96 8.03 36.00 0.29 1.25 16 9 O -0.48 -2.82 16.25 -25.48 -0.41 -3.23 16 10 O -0.35 -0.19 10.22 -39.27 -0.40 -0.59 16 11 C 0.08 -0.01 5.05 37.16 0.19 0.17 16 12 C -0.10 0.22 4.21 -89.81 -0.38 -0.16 16 13 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 14 C -0.14 0.35 6.52 -25.91 -0.17 0.18 16 15 C 0.04 -0.02 0.85 -89.81 -0.08 -0.10 16 16 O -0.33 -0.22 8.36 -35.23 -0.29 -0.52 16 17 C 0.01 -0.01 10.43 101.05 1.05 1.05 16 18 C 0.44 0.43 2.51 37.15 0.09 0.52 16 19 F -0.18 -0.24 15.24 2.25 0.03 -0.21 16 20 F -0.17 -0.48 17.09 2.25 0.04 -0.45 16 21 F -0.17 -0.15 15.82 2.25 0.04 -0.12 16 22 C -0.11 0.20 6.89 -25.92 -0.18 0.02 16 23 C -0.18 -0.23 5.27 -104.44 -0.55 -0.78 16 24 C -0.06 -0.10 2.37 36.01 0.09 -0.01 16 25 O -0.52 -1.76 12.88 -35.23 -0.45 -2.22 16 26 Si 0.69 -0.14 30.25 -169.99 -5.14 -5.29 16 27 C -0.04 0.01 8.65 -39.63 -0.34 -0.33 16 28 C -0.24 0.07 9.04 -39.41 -0.36 -0.28 16 29 H 0.06 -0.22 7.66 -51.93 -0.40 -0.62 16 30 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 31 H 0.10 -0.42 8.14 -51.93 -0.42 -0.85 16 32 H 0.14 -0.15 6.30 -52.49 -0.33 -0.48 16 33 H 0.11 -0.28 7.66 -51.93 -0.40 -0.67 16 34 H 0.11 -0.31 7.66 -51.93 -0.40 -0.71 16 35 H 0.08 -0.02 8.13 -51.93 -0.42 -0.44 16 36 H 0.09 0.10 6.12 -51.93 -0.32 -0.22 16 37 H 0.11 -0.40 8.06 -51.93 -0.42 -0.82 16 38 H 0.10 -0.29 6.70 -51.93 -0.35 -0.63 16 39 H 0.10 -0.18 8.14 -51.93 -0.42 -0.61 16 40 H 0.05 -0.03 6.25 -51.93 -0.32 -0.35 16 41 H 0.06 -0.12 6.76 -51.93 -0.35 -0.47 16 42 H 0.10 -0.13 8.10 -51.93 -0.42 -0.55 16 43 H 0.12 -0.34 7.01 -51.93 -0.36 -0.70 16 44 H 0.12 0.28 7.82 -51.93 -0.41 -0.12 16 45 H 0.37 -0.02 8.70 45.56 0.40 0.38 16 46 H -0.26 -0.84 7.11 56.52 0.40 -0.44 16 47 H -0.26 -0.20 6.67 56.52 0.38 0.18 16 48 H 0.14 -0.25 4.85 -52.49 -0.25 -0.51 16 49 H 0.14 -0.32 6.29 -52.48 -0.33 -0.65 16 LS Contribution 412.82 15.07 6.22 6.22 Total: 0.00 -9.58 412.82 -6.94 -16.53 By element: Atomic # 1 Polarization: -4.70 SS G_CDS: -5.97 Total: -10.67 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -0.03 Total: 2.06 kcal Atomic # 8 Polarization: -5.95 SS G_CDS: -2.12 Total: -8.07 kcal Atomic # 9 Polarization: -0.88 SS G_CDS: 0.11 Total: -0.77 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: -5.14 Total: -5.29 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -9.58 -6.94 -16.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4974316_17321610.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -289.925 kcal (2) G-P(sol) polarization free energy of solvation -9.584 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -299.509 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.942 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.526 kcal (6) G-S(sol) free energy of system = (1) + (5) -306.450 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds