Wall clock time and date at job start Sat Mar 6 2021 09:08:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35897 * 117.00417 * 2 1 4 4 C 1.38616 * 120.03065 * 180.02562 * 3 2 1 5 5 C 1.38650 * 119.88831 * 180.02562 * 4 3 2 6 6 O 1.35906 * 120.02188 * 179.97438 * 5 4 3 7 7 C 1.42895 * 117.00293 * 359.97438 * 6 5 4 8 8 C 1.50693 * 109.47313 * 180.02562 * 7 6 5 9 9 O 1.20827 * 119.99972 * 359.97438 * 8 7 6 10 10 O 1.34234 * 120.00353 * 180.27743 * 8 7 6 11 11 C 1.45192 * 117.00206 * 179.72110 * 10 8 7 12 12 C 1.53002 * 109.47016 * 179.97438 * 11 10 8 13 13 H 1.08995 * 112.85073 * 43.80437 * 12 11 10 14 14 C 1.53779 * 113.61479 * 175.00022 * 12 11 10 15 15 C 1.53791 * 87.08342 * 89.11693 * 14 12 11 16 16 O 1.42900 * 113.61169 * 270.80227 * 15 14 12 17 17 C 1.42894 * 114.00071 * 294.81648 * 16 15 14 18 18 C 1.52991 * 113.61472 * 139.97922 * 15 14 12 19 19 F 1.39906 * 109.47360 * 54.76412 * 18 15 14 20 20 F 1.39903 * 109.47041 * 174.76407 * 18 15 14 21 21 F 1.39900 * 109.47690 * 294.76361 * 18 15 14 22 22 C 1.53780 * 87.07652 * 25.43258 * 15 14 12 23 23 C 1.38749 * 119.94845 * 0.24666 * 5 4 3 24 24 C 1.50709 * 119.97130 * 179.74658 * 23 5 4 25 25 O 1.42901 * 109.46604 * 75.00503 * 24 23 5 26 26 Si 1.86298 * 109.46900 * 195.00320 * 24 23 5 27 27 C 1.38194 * 120.05469 * 359.50208 * 23 5 4 28 28 C 1.38151 * 120.10788 * 0.49993 * 27 23 5 29 29 H 1.09003 * 109.47142 * 300.00151 * 1 2 3 30 30 H 1.09000 * 109.47104 * 59.99397 * 1 2 3 31 31 H 1.08997 * 109.47449 * 179.97438 * 1 2 3 32 32 H 1.07997 * 120.04726 * 0.02562 * 4 3 2 33 33 H 1.09000 * 109.47118 * 59.99401 * 7 6 5 34 34 H 1.09002 * 109.47090 * 300.00022 * 7 6 5 35 35 H 1.09001 * 109.47396 * 299.99955 * 11 10 8 36 36 H 1.09005 * 109.47342 * 60.00186 * 11 10 8 37 37 H 1.08997 * 113.61650 * 203.66469 * 14 12 11 38 38 H 1.08996 * 113.61686 * 334.48836 * 14 12 11 39 39 H 1.08995 * 109.47158 * 182.48887 * 17 16 15 40 40 H 1.09004 * 109.47091 * 302.48751 * 17 16 15 41 41 H 1.08998 * 109.47114 * 62.48355 * 17 16 15 42 42 H 1.09002 * 113.61293 * 220.01817 * 22 15 14 43 43 H 1.09006 * 113.61766 * 89.11540 * 22 15 14 44 44 H 1.08994 * 109.47318 * 315.00714 * 24 23 5 45 45 H 0.96702 * 113.99780 * 60.00192 * 25 24 23 46 46 H 1.48497 * 109.99881 * 180.02562 * 26 24 23 47 47 H 1.48499 * 110.00418 * 301.32130 * 26 24 23 48 48 H 1.08001 * 119.94345 * 180.24898 * 27 23 5 49 49 H 1.08007 * 119.97420 * 179.72880 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4303 1.2840 -0.0005 5 6 4.0567 2.5209 0.0000 6 8 5.4137 2.5958 0.0000 7 6 6.1317 1.3603 0.0000 8 6 7.6125 1.6399 0.0006 9 8 8.0120 2.7802 0.0006 10 8 8.4877 0.6221 -0.0049 11 6 9.8984 0.9658 -0.0102 12 6 10.7353 -0.3150 -0.0154 13 1 10.3571 -1.0649 -0.7101 14 6 12.2468 -0.0627 -0.1440 15 6 12.2842 0.0189 1.3913 16 8 12.0595 1.3351 1.9001 17 6 13.0806 2.2736 1.5557 18 6 13.5088 -0.6569 2.0112 19 9 14.6720 -0.1259 1.4433 20 9 13.5181 -0.4295 3.3916 21 9 13.4564 -2.0332 1.7658 22 6 11.0267 -0.8662 1.3904 23 6 3.2972 3.6820 0.0063 24 6 3.9777 5.0267 0.0126 25 8 4.5030 5.3008 -1.2878 26 14 2.7444 6.3445 0.4746 27 6 1.9173 3.6065 0.0015 28 6 1.2907 2.3753 0.0010 29 1 -0.3633 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3634 -1.0276 -0.0005 32 1 4.0196 0.3790 -0.0014 33 1 5.8699 0.7880 -0.8899 34 1 5.8700 0.7880 0.8900 35 1 10.1261 1.5526 -0.9001 36 1 10.1335 1.5494 0.8799 37 1 12.7981 -0.9110 -0.5497 38 1 12.4921 0.8771 -0.6385 39 1 12.8592 3.2366 2.0157 40 1 14.0435 1.9115 1.9162 41 1 13.1181 2.3883 0.4724 42 1 10.2868 -0.5744 2.1358 43 1 11.2443 -1.9343 1.4041 44 1 4.7905 5.0192 0.7387 45 1 3.8339 5.3228 -1.9856 46 1 3.4029 7.6754 0.4839 47 1 1.6151 6.3438 -0.4896 48 1 1.3279 4.5115 0.0024 49 1 0.2121 2.3188 0.0018 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_4974316_17321610.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:08:02 Heat of formation + Delta-G solvation = -305.005631 kcal Electronic energy + Delta-G solvation = -39539.691914 eV Core-core repulsion = 33601.071044 eV Total energy + Delta-G solvation = -5938.620870 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.141 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -51.27632 -48.80707 -48.74582 -42.09623 -41.66447 -41.07677 -40.01912 -38.54906 -37.79945 -37.04174 -36.91077 -32.33572 -31.77781 -30.92450 -29.68708 -28.37211 -28.21793 -27.25909 -26.79508 -26.13545 -24.05008 -23.33939 -22.53430 -22.11808 -20.69805 -20.07550 -19.80793 -19.56472 -19.27382 -18.70691 -18.46525 -18.13365 -17.99740 -17.27181 -17.23615 -17.20670 -16.92330 -16.54088 -16.50032 -16.41252 -15.97104 -15.85168 -15.68055 -15.62339 -15.51006 -15.22265 -15.18909 -15.07536 -14.92345 -14.83972 -14.70861 -14.50537 -14.27247 -13.98798 -13.72577 -13.51408 -13.37267 -13.31289 -13.18963 -13.15326 -12.77823 -12.54058 -12.41116 -12.30141 -12.09665 -12.02863 -11.75842 -11.74153 -11.67596 -11.62865 -11.54371 -10.83609 -10.51923 -9.72189 -9.12316 -4.91714 0.19509 0.28721 0.90064 0.94985 1.32312 1.51052 1.56544 1.97067 2.05482 2.20504 2.39550 2.54474 2.55845 2.60536 2.86115 3.17830 3.27126 3.39747 3.49538 3.54996 3.71019 3.73932 3.78948 3.90083 3.92983 4.06129 4.16028 4.18438 4.20687 4.22724 4.32077 4.33845 4.39896 4.43154 4.43841 4.46705 4.49334 4.59450 4.65740 4.66471 4.75093 4.80410 4.80834 4.96328 5.01297 5.22675 5.24078 5.27345 5.45231 5.67694 6.07588 6.36402 6.53577 6.57429 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.330 6.330 3 C 0.165 3.835 4 C -0.251 4.251 5 C 0.178 3.822 6 O -0.305 6.305 7 C 0.063 3.937 8 C 0.467 3.533 9 O -0.523 6.523 10 O -0.344 6.344 11 C 0.076 3.924 12 C -0.091 4.091 13 H 0.128 0.872 14 C -0.135 4.135 15 C 0.030 3.970 16 O -0.349 6.349 17 C 0.005 3.995 18 C 0.434 3.566 19 F -0.185 7.185 20 F -0.188 7.188 21 F -0.174 7.174 22 C -0.111 4.111 23 C -0.192 4.192 24 C -0.078 4.078 25 O -0.549 6.549 26 Si 0.780 3.220 27 C -0.041 4.041 28 C -0.235 4.235 29 H 0.071 0.929 30 H 0.067 0.933 31 H 0.116 0.884 32 H 0.155 0.845 33 H 0.134 0.866 34 H 0.137 0.863 35 H 0.076 0.924 36 H 0.079 0.921 37 H 0.130 0.870 38 H 0.101 0.899 39 H 0.107 0.893 40 H 0.049 0.951 41 H 0.068 0.932 42 H 0.092 0.908 43 H 0.132 0.868 44 H 0.099 0.901 45 H 0.382 0.618 46 H -0.309 1.309 47 H -0.262 1.262 48 H 0.157 0.843 49 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.296 -4.608 -1.008 7.867 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.119 3.881 4 C -0.270 4.270 5 C 0.133 3.867 6 O -0.218 6.218 7 C -0.012 4.012 8 C 0.310 3.690 9 O -0.411 6.411 10 O -0.260 6.260 11 C 0.003 3.997 12 C -0.109 4.109 13 H 0.146 0.854 14 C -0.173 4.173 15 C -0.013 4.013 16 O -0.267 6.267 17 C -0.090 4.090 18 C 0.379 3.621 19 F -0.166 7.166 20 F -0.170 7.170 21 F -0.155 7.155 22 C -0.148 4.148 23 C -0.194 4.194 24 C -0.185 4.185 25 O -0.357 6.357 26 Si 0.683 3.317 27 C -0.059 4.059 28 C -0.254 4.254 29 H 0.089 0.911 30 H 0.086 0.914 31 H 0.134 0.866 32 H 0.172 0.828 33 H 0.151 0.849 34 H 0.154 0.846 35 H 0.095 0.905 36 H 0.098 0.902 37 H 0.148 0.852 38 H 0.119 0.881 39 H 0.125 0.875 40 H 0.068 0.932 41 H 0.086 0.914 42 H 0.111 0.889 43 H 0.150 0.850 44 H 0.117 0.883 45 H 0.231 0.769 46 H -0.237 1.237 47 H -0.188 1.188 48 H 0.174 0.826 49 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -5.894 -3.537 -0.792 6.919 hybrid contribution 1.100 -0.078 -0.977 1.474 sum -4.793 -3.615 -1.769 6.259 Atomic orbital electron populations 1.23405 0.75982 1.05708 1.02712 1.86062 1.23766 1.26582 1.87882 1.18871 0.91643 0.84998 0.92636 1.20575 0.93508 0.97449 1.15446 1.18481 0.81020 0.93235 0.93996 1.86141 1.16018 1.31156 1.88520 1.22193 0.84437 0.86384 1.08192 1.23335 0.90020 0.83212 0.72474 1.90750 1.80757 1.24393 1.45199 1.86381 1.18638 1.37234 1.83770 1.23142 0.75255 0.97675 1.03643 1.22048 0.93598 0.96801 0.98482 0.85447 1.23661 0.96138 1.06405 0.91057 1.24276 0.93215 0.86936 0.96830 1.88075 1.46490 1.16413 1.75698 1.23259 0.90669 0.93073 1.02026 1.21471 0.86109 0.77758 0.76714 1.93178 1.52891 1.85894 1.84673 1.93190 1.96803 1.94360 1.32604 1.93174 1.96449 1.31910 1.93976 1.23370 0.93123 0.99954 0.98356 1.19596 0.93477 0.93880 1.12412 1.25148 1.06332 0.99574 0.87460 1.86644 1.38576 1.92948 1.17542 0.94088 0.75515 0.73443 0.88604 1.20951 0.91986 0.98830 0.94084 1.21416 1.01662 0.91218 1.11058 0.91066 0.91438 0.86605 0.82781 0.84866 0.84561 0.90528 0.90249 0.85179 0.88066 0.87460 0.93187 0.91359 0.88944 0.84976 0.88258 0.76940 1.23726 1.18822 0.82634 0.82479 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.06 10.49 -92.39 -0.97 -1.03 16 3 C 0.16 0.14 6.68 22.49 0.15 0.29 16 4 C -0.25 -0.32 8.97 22.46 0.20 -0.11 16 5 C 0.18 0.76 6.66 22.49 0.15 0.91 16 6 O -0.31 -2.11 8.99 -73.41 -0.66 -2.77 16 7 C 0.06 -0.02 5.33 71.23 0.38 0.36 16 8 C 0.47 2.49 8.03 71.23 0.57 3.06 16 9 O -0.52 -7.45 16.25 28.39 0.46 -6.99 16 10 O -0.34 -0.52 10.22 -51.46 -0.53 -1.04 16 11 C 0.08 0.03 5.05 71.98 0.36 0.39 16 12 C -0.09 0.45 4.21 -10.27 -0.04 0.41 16 13 H 0.13 -1.05 8.14 -2.39 -0.02 -1.07 16 14 C -0.14 0.74 6.52 31.12 0.20 0.95 16 15 C 0.03 -0.02 0.85 -10.27 -0.01 -0.03 16 16 O -0.35 -0.87 8.36 -148.98 -1.25 -2.12 16 17 C 0.01 0.00 10.43 113.37 1.18 1.18 16 18 C 0.43 1.05 2.51 71.98 0.18 1.23 16 19 F -0.18 -0.58 15.24 44.97 0.69 0.10 16 20 F -0.19 -1.26 17.09 44.97 0.77 -0.49 16 21 F -0.17 -0.28 15.82 44.97 0.71 0.43 16 22 C -0.11 0.40 6.89 31.12 0.21 0.62 16 23 C -0.19 -0.59 5.27 -19.75 -0.10 -0.69 16 24 C -0.08 -0.37 2.37 71.24 0.17 -0.20 16 25 O -0.55 -4.67 12.88 -148.98 -1.92 -6.59 16 26 Si 0.78 -0.18 30.25 68.60 2.08 1.89 16 27 C -0.04 0.05 8.65 22.24 0.19 0.24 16 28 C -0.23 0.46 9.04 22.38 0.20 0.66 16 29 H 0.07 -0.64 7.66 -2.39 -0.02 -0.66 16 30 H 0.07 -0.58 7.66 -2.39 -0.02 -0.60 16 31 H 0.12 -1.12 8.14 -2.39 -0.02 -1.14 16 32 H 0.15 -0.44 6.30 -2.91 -0.02 -0.45 16 33 H 0.13 -0.74 7.66 -2.39 -0.02 -0.75 16 34 H 0.14 -0.82 7.66 -2.39 -0.02 -0.84 16 35 H 0.08 0.04 8.13 -2.39 -0.02 0.02 16 36 H 0.08 0.30 6.12 -2.38 -0.01 0.28 16 37 H 0.13 -1.09 8.06 -2.39 -0.02 -1.11 16 38 H 0.10 -0.64 6.70 -2.39 -0.02 -0.66 16 39 H 0.11 -0.23 8.14 -2.39 -0.02 -0.25 16 40 H 0.05 0.01 6.25 -2.39 -0.01 -0.01 16 41 H 0.07 -0.25 6.76 -2.39 -0.02 -0.27 16 42 H 0.09 -0.19 8.10 -2.39 -0.02 -0.21 16 43 H 0.13 -0.86 7.01 -2.38 -0.02 -0.88 16 44 H 0.10 0.75 7.82 -2.39 -0.02 0.73 16 45 H 0.38 0.42 8.70 -74.06 -0.64 -0.22 16 46 H -0.31 -2.57 7.11 99.48 0.71 -1.86 16 47 H -0.26 -0.01 6.67 99.48 0.66 0.65 16 48 H 0.16 -0.84 4.85 -2.91 -0.01 -0.85 16 49 H 0.16 -1.11 6.29 -2.91 -0.02 -1.12 16 Total: 0.00 -24.50 412.82 4.89 -19.61 By element: Atomic # 1 Polarization: -11.66 SS G_CDS: 0.39 Total: -11.27 kcal Atomic # 6 Polarization: 5.15 SS G_CDS: 5.12 Total: 10.27 kcal Atomic # 8 Polarization: -15.68 SS G_CDS: -4.86 Total: -20.54 kcal Atomic # 9 Polarization: -2.13 SS G_CDS: 2.17 Total: 0.04 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: 2.08 Total: 1.89 kcal Total: -24.50 4.89 -19.61 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4974316_17321610.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -285.393 kcal (2) G-P(sol) polarization free energy of solvation -24.502 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -309.895 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.890 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.613 kcal (6) G-S(sol) free energy of system = (1) + (5) -305.006 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds