Wall clock time and date at job start Sat Mar 6 2021 09:59:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.37696 * 125.67631 * 2 1 4 4 C 1.46487 * 126.23779 * 359.97438 * 3 2 1 5 5 O 1.21626 * 119.99652 * 179.71219 * 4 3 2 6 6 O 1.34889 * 119.99927 * 359.70333 * 4 3 2 7 7 C 1.45196 * 117.00119 * 180.02562 * 6 4 3 8 8 C 1.52995 * 109.47658 * 180.02562 * 7 6 4 9 9 H 1.09002 * 112.84941 * 314.67336 * 8 7 6 10 10 C 1.53791 * 113.61345 * 85.86204 * 8 7 6 11 11 C 1.53951 * 87.01675 * 139.95333 * 10 8 7 12 12 H 1.09005 * 113.61133 * 89.20422 * 11 10 8 13 13 O 1.42902 * 113.66910 * 220.06815 * 11 10 8 14 14 C 1.53778 * 113.61704 * 183.47130 * 8 7 6 15 15 C 1.37995 * 107.52600 * 179.70503 * 3 2 1 16 16 C 1.39830 * 107.07978 * 0.26338 * 15 3 2 17 17 Br 1.89098 * 126.06136 * 179.97438 * 16 15 3 18 18 C 1.35543 * 107.86929 * 0.02562 * 16 15 3 19 19 C 1.50703 * 125.55643 * 180.02562 * 18 16 15 20 20 O 1.42897 * 109.46897 * 242.89506 * 19 18 16 21 21 Si 1.86302 * 109.46935 * 122.90181 * 19 18 16 22 22 H 1.09000 * 109.46525 * 90.02326 * 1 2 3 23 23 H 1.08994 * 109.46668 * 210.01894 * 1 2 3 24 24 H 1.08995 * 109.46950 * 330.02207 * 1 2 3 25 25 H 1.09006 * 109.47249 * 300.00683 * 7 6 4 26 26 H 1.09002 * 109.46975 * 59.99871 * 7 6 4 27 27 H 1.08999 * 113.61374 * 254.53649 * 10 8 7 28 28 H 1.09003 * 113.60688 * 25.43906 * 10 8 7 29 29 H 0.96702 * 113.99600 * 277.56579 * 13 11 10 30 30 H 1.08995 * 113.61745 * 334.56960 * 14 8 7 31 31 H 1.09005 * 113.61537 * 105.47253 * 14 8 7 32 32 H 1.07997 * 126.46071 * 180.27054 * 15 3 2 33 33 H 1.09001 * 109.47388 * 2.90089 * 19 18 16 34 34 H 0.96693 * 114.00388 * 300.00380 * 20 19 18 35 35 H 1.48503 * 109.99698 * 174.89446 * 21 19 18 36 36 H 1.48503 * 109.99586 * 296.21047 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2681 1.1185 0.0000 4 6 1.8133 2.5110 -0.0005 5 8 2.6259 3.4161 0.0048 6 8 0.4935 2.7895 -0.0071 7 6 0.1156 4.1914 -0.0078 8 6 -1.4099 4.3085 -0.0150 9 1 -1.8825 3.6373 -0.7321 10 6 -2.0386 4.2531 1.3875 11 6 -3.0010 5.3565 0.9117 12 1 -3.9103 4.9729 0.4488 13 8 -3.2603 6.3565 1.8990 14 6 -1.9161 5.7580 -0.1016 15 6 3.5794 0.6887 0.0068 16 6 3.5533 -0.7094 0.0047 17 35 5.0609 -1.8509 0.0109 18 6 2.2557 -1.1011 -0.0037 19 6 1.7711 -2.5281 -0.0080 20 8 1.0442 -2.7806 -1.2121 21 14 0.6589 -2.8106 1.4596 22 1 -0.3632 -0.0004 -1.0277 23 1 -0.3632 -0.8898 0.5141 24 1 -0.3633 0.8901 0.5135 25 1 0.5126 4.6752 0.8847 26 1 0.5218 4.6768 -0.8953 27 1 -2.5323 3.3067 1.6075 28 1 -1.3641 4.5745 2.1812 29 1 -3.9418 6.1097 2.5392 30 1 -1.2083 6.4915 0.2843 31 1 -2.3113 6.0247 -1.0818 32 1 4.4598 1.3141 0.0127 33 1 2.6258 -3.2023 0.0487 34 1 0.2684 -2.2154 -1.3290 35 1 0.0767 -4.1755 1.4003 36 1 1.4270 -2.6403 2.7191 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_4999870_11354868.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:59:32 Heat of formation + Delta-G solvation = -81.835593 kcal Electronic energy + Delta-G solvation = -22581.503638 eV Core-core repulsion = 18887.881541 eV Total energy + Delta-G solvation = -3693.622097 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.029 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -43.00198 -41.32079 -40.12863 -37.98715 -37.64200 -35.96449 -34.62281 -32.35448 -31.22099 -29.73548 -27.45021 -27.17392 -26.69094 -24.12105 -23.01511 -21.76186 -21.11369 -20.40908 -19.01128 -18.63575 -18.40109 -17.83380 -17.68600 -16.92321 -16.56652 -16.32606 -15.96143 -15.58012 -15.05184 -14.89669 -14.58484 -14.41796 -14.26837 -14.09056 -13.86037 -13.65478 -13.43224 -13.20910 -12.93807 -12.79632 -12.37341 -12.36242 -12.17451 -11.99239 -11.95562 -11.65018 -11.30490 -11.17303 -10.86668 -10.68991 -9.91001 -9.45703 -5.21627 -0.15884 0.53371 0.81274 1.11952 1.21117 1.56809 1.66580 1.80163 1.86494 3.12456 3.23935 3.38638 3.42333 3.51879 3.60727 3.66770 3.82395 3.92774 4.00392 4.19112 4.24036 4.26491 4.33360 4.37428 4.47456 4.50387 4.67184 4.78165 4.80793 4.84461 5.02552 5.11080 5.13084 5.17951 5.41320 5.44670 5.74745 6.47845 6.49980 6.92823 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.040 3.960 2 N -0.392 5.392 3 C -0.033 4.033 4 C 0.546 3.454 5 O -0.527 6.527 6 O -0.340 6.340 7 C 0.077 3.923 8 C -0.097 4.097 9 H 0.128 0.872 10 C -0.161 4.161 11 C 0.073 3.927 12 H 0.105 0.895 13 O -0.586 6.586 14 C -0.130 4.130 15 C -0.082 4.082 16 C -0.189 4.189 17 Br -0.024 7.024 18 C 0.071 3.929 19 C -0.059 4.059 20 O -0.538 6.538 21 Si 0.762 3.238 22 H 0.123 0.877 23 H 0.114 0.886 24 H 0.123 0.877 25 H 0.065 0.935 26 H 0.072 0.928 27 H 0.094 0.906 28 H 0.075 0.925 29 H 0.395 0.605 30 H 0.077 0.923 31 H 0.090 0.910 32 H 0.158 0.842 33 H 0.125 0.875 34 H 0.392 0.608 35 H -0.264 1.264 36 H -0.286 1.286 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.021 -0.913 0.157 10.064 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 N -0.067 5.067 3 C -0.144 4.144 4 C 0.392 3.608 5 O -0.417 6.417 6 O -0.257 6.257 7 C 0.004 3.996 8 C -0.115 4.115 9 H 0.146 0.854 10 C -0.198 4.198 11 C 0.014 3.986 12 H 0.123 0.877 13 O -0.395 6.395 14 C -0.167 4.167 15 C -0.109 4.109 16 C -0.274 4.274 17 Br 0.060 6.940 18 C -0.052 4.052 19 C -0.168 4.168 20 O -0.345 6.345 21 Si 0.663 3.337 22 H 0.141 0.859 23 H 0.132 0.868 24 H 0.141 0.859 25 H 0.084 0.916 26 H 0.091 0.909 27 H 0.112 0.888 28 H 0.094 0.906 29 H 0.246 0.754 30 H 0.096 0.904 31 H 0.108 0.892 32 H 0.175 0.825 33 H 0.143 0.857 34 H 0.242 0.758 35 H -0.189 1.189 36 H -0.213 1.213 Dipole moment (debyes) X Y Z Total from point charges -8.926 -1.559 0.442 9.071 hybrid contribution 0.661 0.239 0.073 0.707 sum -8.264 -1.320 0.514 8.385 Atomic orbital electron populations 1.23081 0.72438 1.06792 1.07370 1.44130 1.08439 1.03000 1.51110 1.19160 0.90145 0.84321 1.20792 1.19611 0.81360 0.87232 0.72576 1.90947 1.55846 1.47205 1.47702 1.86530 1.23718 1.31498 1.83961 1.23259 0.96220 0.77480 1.02670 1.22358 0.91116 0.98333 0.99738 0.85373 1.23778 0.99225 1.00596 0.96235 1.23481 0.96981 0.88417 0.89684 0.87687 1.86496 1.63332 1.44861 1.44789 1.23123 0.97807 0.95744 1.00033 1.21314 0.95752 0.92850 1.00940 1.20944 0.92114 0.94210 1.20137 1.96661 1.36459 1.62610 1.98262 1.20920 0.89445 0.90638 1.04187 1.25124 1.02739 0.89460 0.99428 1.86618 1.44582 1.63325 1.39977 0.94503 0.82870 0.84006 0.72332 0.85925 0.86815 0.85853 0.91639 0.90928 0.88777 0.90635 0.75450 0.90438 0.89185 0.82471 0.85738 0.75791 1.18906 1.21260 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.53 8.91 127.77 1.14 0.60 16 2 N -0.39 1.18 3.10 -519.66 -1.61 -0.43 16 3 C -0.03 -0.10 6.88 40.32 0.28 0.18 16 4 C 0.55 2.33 7.92 69.97 0.55 2.88 16 5 O -0.53 -6.02 16.68 19.42 0.32 -5.70 16 6 O -0.34 0.70 7.66 -58.03 -0.44 0.26 16 7 C 0.08 -0.19 5.30 71.98 0.38 0.19 16 8 C -0.10 0.72 4.01 -10.27 -0.04 0.68 16 9 H 0.13 -1.44 8.14 -2.39 -0.02 -1.46 16 10 C -0.16 1.15 7.48 31.18 0.23 1.38 16 11 C 0.07 -0.42 5.21 31.18 0.16 -0.26 16 12 H 0.11 -1.03 8.14 -2.38 -0.02 -1.05 16 13 O -0.59 0.76 13.67 -148.98 -2.04 -1.28 16 14 C -0.13 0.61 7.48 31.12 0.23 0.84 16 15 C -0.08 -0.48 10.64 22.60 0.24 -0.24 16 16 C -0.19 -0.98 6.53 22.03 0.14 -0.83 16 17 Br -0.02 -0.14 33.05 -20.37 -0.67 -0.81 16 18 C 0.07 0.04 5.27 41.36 0.22 0.26 16 19 C -0.06 0.10 2.88 71.24 0.20 0.30 16 20 O -0.54 1.56 12.88 -148.98 -1.92 -0.36 16 21 Si 0.76 -3.72 29.37 68.60 2.01 -1.70 16 22 H 0.12 -2.19 8.05 -2.39 -0.02 -2.21 16 23 H 0.11 -2.06 4.05 -2.39 -0.01 -2.07 16 24 H 0.12 -1.70 6.16 -2.39 -0.01 -1.72 16 25 H 0.07 0.00 7.87 -2.38 -0.02 -0.01 16 26 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 27 H 0.09 -1.01 8.14 -2.39 -0.02 -1.03 16 28 H 0.08 -0.26 7.92 -2.39 -0.02 -0.28 16 29 H 0.40 -3.74 9.12 -74.06 -0.68 -4.41 16 30 H 0.08 -0.09 8.10 -2.39 -0.02 -0.11 16 31 H 0.09 -0.58 8.14 -2.38 -0.02 -0.60 16 32 H 0.16 0.95 8.06 -2.91 -0.02 0.93 16 33 H 0.13 0.14 6.94 -2.39 -0.02 0.12 16 34 H 0.39 -4.86 7.31 -74.06 -0.54 -5.40 16 35 H -0.26 -0.02 7.11 99.48 0.71 0.69 16 36 H -0.29 -0.73 7.11 99.48 0.71 -0.03 16 Total: 0.00 -22.14 323.41 -0.64 -22.78 By element: Atomic # 1 Polarization: -18.71 SS G_CDS: -0.04 Total: -18.75 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: 3.75 Total: 5.99 kcal Atomic # 7 Polarization: 1.18 SS G_CDS: -1.61 Total: -0.43 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -4.08 Total: -7.07 kcal Atomic # 14 Polarization: -3.72 SS G_CDS: 2.01 Total: -1.70 kcal Atomic # 35 Polarization: -0.14 SS G_CDS: -0.67 Total: -0.81 kcal Total: -22.14 -0.64 -22.78 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4999870_11354868.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.056 kcal (2) G-P(sol) polarization free energy of solvation -22.138 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.194 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.642 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.780 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.836 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds