Wall clock time and date at job start Sat Mar 6 2021 07:31:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.37689 * 125.67767 * 2 1 4 4 C 1.46488 * 126.23754 * 359.97438 * 3 2 1 5 5 O 1.21622 * 120.00180 * 180.02562 * 4 3 2 6 6 O 1.34900 * 119.99935 * 359.97438 * 4 3 2 7 7 C 1.45198 * 116.99845 * 179.97438 * 6 4 3 8 8 C 1.53004 * 109.46911 * 180.02562 * 7 6 4 9 9 H 1.08995 * 109.47111 * 179.97438 * 8 7 6 10 10 O 1.42966 * 109.47093 * 300.00217 * 8 7 6 11 11 C 1.43093 * 113.76695 * 178.79214 * 10 8 7 12 12 C 1.53256 * 108.94392 * 302.03076 * 11 10 8 13 13 H 1.09004 * 109.57579 * 294.71245 * 12 11 10 14 14 N 1.46508 * 109.57255 * 174.46218 * 12 11 10 15 15 C 1.34516 * 124.45863 * 299.69583 * 14 12 11 16 16 O 1.21446 * 125.71314 * 0.03390 * 15 14 12 17 17 C 1.47817 * 108.58077 * 179.91162 * 15 14 12 18 18 C 1.40948 * 105.87812 * 0.34235 * 17 15 14 19 19 C 1.38565 * 119.82118 * 179.79815 * 18 17 15 20 20 C 1.38612 * 119.72282 * 0.02562 * 19 18 17 21 21 C 1.38231 * 120.45658 * 359.97438 * 20 19 18 22 22 C 1.38565 * 134.30404 * 180.10696 * 17 15 14 23 23 C 1.34524 * 124.45767 * 120.00150 * 14 12 11 24 24 O 1.21449 * 125.71500 * 359.95903 * 23 14 12 25 25 C 1.53261 * 108.84769 * 54.52408 * 12 11 10 26 26 O 1.42968 * 109.47144 * 60.00194 * 8 7 6 27 27 C 1.37986 * 107.52707 * 179.97438 * 3 2 1 28 28 C 1.39819 * 107.08338 * 359.97438 * 27 3 2 29 29 Br 1.89101 * 126.06348 * 180.02562 * 28 27 3 30 30 C 1.35541 * 107.87011 * 359.73973 * 28 27 3 31 31 C 1.50698 * 125.56364 * 180.29755 * 30 28 27 32 32 O 1.42904 * 109.46923 * 210.15541 * 31 30 28 33 33 Si 1.86296 * 109.46832 * 330.15265 * 31 30 28 34 34 H 1.08999 * 109.46871 * 90.02716 * 1 2 3 35 35 H 1.08994 * 109.46947 * 210.02423 * 1 2 3 36 36 H 1.08997 * 109.47271 * 330.02940 * 1 2 3 37 37 H 1.08995 * 109.47435 * 300.00167 * 7 6 4 38 38 H 1.08996 * 109.46984 * 60.00385 * 7 6 4 39 39 H 1.09001 * 109.55689 * 61.87221 * 11 10 8 40 40 H 1.09001 * 109.55696 * 182.18940 * 11 10 8 41 41 H 1.08002 * 120.14197 * 180.02562 * 19 18 17 42 42 H 1.08000 * 119.77291 * 180.02562 * 20 19 18 43 43 H 1.07995 * 119.77179 * 179.97438 * 21 20 19 44 44 H 1.08001 * 120.13722 * 0.24425 * 22 17 15 45 45 H 1.09001 * 109.55277 * 65.31350 * 25 12 11 46 46 H 1.08997 * 109.55641 * 185.63556 * 25 12 11 47 47 H 1.08006 * 126.45637 * 180.02562 * 27 3 2 48 48 H 1.08997 * 109.47610 * 90.15283 * 31 30 28 49 49 H 0.96698 * 113.99661 * 59.99540 * 32 31 30 50 50 H 1.48504 * 109.99889 * 180.02562 * 33 31 30 51 51 H 1.48497 * 110.00312 * 301.32285 * 33 31 30 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2681 1.1185 0.0000 4 6 1.8134 2.5110 -0.0005 5 8 2.6258 3.4160 -0.0009 6 8 0.4934 2.7895 -0.0016 7 6 0.1156 4.1914 -0.0015 8 6 -1.4100 4.3084 -0.0022 9 1 -1.6937 5.3608 -0.0016 10 8 -1.9361 3.6731 -1.1698 11 6 -3.3645 3.7048 -1.2495 12 6 -3.9475 3.0296 -0.0034 13 1 -3.6830 1.9721 -0.0035 14 7 -5.4058 3.1707 -0.0056 15 6 -6.0566 4.3479 0.0047 16 8 -5.5365 5.4453 0.0165 17 6 -7.5107 4.0823 -0.0038 18 6 -7.6464 2.6794 -0.0115 19 6 -8.9093 2.1093 -0.0163 20 6 -10.0310 2.9237 -0.0141 21 6 -9.8979 4.2996 -0.0065 22 6 -8.6409 4.8839 -0.0012 23 6 -6.2702 2.1399 -0.0123 24 8 -5.9702 0.9631 -0.0181 25 6 -3.3655 3.7044 1.2435 26 8 -1.9372 3.6727 1.1648 27 6 3.5793 0.6886 0.0006 28 6 3.5533 -0.7093 0.0015 29 35 5.0609 -1.8508 0.0033 30 6 2.2557 -1.1012 0.0074 31 6 1.7711 -2.5280 0.0167 32 8 0.5129 -2.6081 -0.6562 33 14 3.0115 -3.6108 -0.8549 34 1 -0.3633 -0.0005 -1.0277 35 1 -0.3633 -0.8897 0.5142 36 1 -0.3633 0.8902 0.5134 37 1 0.5163 4.6757 0.8889 38 1 0.5179 4.6762 -0.8910 39 1 -3.7044 4.7394 -1.2968 40 1 -3.6921 3.1704 -2.1413 41 1 -9.0194 1.0350 -0.0218 42 1 -11.0157 2.4803 -0.0174 43 1 -10.7793 4.9236 -0.0053 44 1 -8.5429 5.9594 0.0049 45 1 -3.7055 4.7390 1.2907 46 1 -3.6940 3.1697 2.1347 47 1 4.4598 1.3142 0.0011 48 1 1.6545 -2.8655 1.0465 49 1 0.5419 -2.3225 -1.5796 50 1 2.5449 -5.0206 -0.8532 51 1 3.2032 -3.1415 -2.2507 There are 81 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 81 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_4999870_13594054.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 07:31:40 Heat of formation + Delta-G solvation = -140.591916 kcal Electronic energy + Delta-G solvation = -44921.385858 eV Core-core repulsion = 38995.085188 eV Total energy + Delta-G solvation = -5926.300670 eV No. of doubly occupied orbitals = 81 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 507.054 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -43.73493 -43.02798 -41.57451 -40.95255 -39.97620 -39.49942 -38.09177 -37.74083 -37.21059 -37.13847 -34.84405 -34.53908 -32.54905 -32.18488 -31.94851 -31.26866 -29.95943 -27.57915 -27.53424 -27.27859 -26.37577 -25.45110 -24.45195 -23.52045 -23.41400 -22.35280 -21.63563 -21.16596 -20.97913 -19.20647 -19.18107 -19.00146 -18.90943 -18.60187 -18.22623 -17.81905 -17.65433 -17.53084 -17.16248 -16.93125 -16.81635 -16.50316 -16.21090 -16.09403 -15.90516 -15.71358 -15.51581 -15.50556 -15.35339 -15.08900 -15.01124 -14.82242 -14.73601 -14.65783 -14.47028 -14.36030 -14.13236 -13.82766 -13.75926 -13.63547 -13.30658 -13.16084 -12.89780 -12.82232 -12.71807 -12.53853 -12.51025 -12.28238 -12.13841 -12.00282 -11.95674 -11.72780 -11.66606 -11.64624 -11.01525 -10.94052 -10.89402 -10.28162 -10.26879 -9.98402 -9.52165 -4.69579 -1.13683 -0.16312 -0.08418 0.26434 0.79094 0.84337 0.86365 1.08541 1.29915 1.47091 1.58928 1.66008 1.76046 1.95846 2.13749 2.18817 2.41838 2.54956 3.03809 3.04514 3.11529 3.18915 3.18979 3.32167 3.42185 3.51289 3.64053 3.66917 3.79230 3.89773 4.00173 4.02105 4.02288 4.04443 4.12526 4.13446 4.18540 4.22853 4.24200 4.34115 4.39449 4.41547 4.43196 4.46259 4.52661 4.70472 4.78088 4.85266 4.99076 5.09696 5.16074 5.22915 5.30624 5.37077 5.43260 5.63019 5.66737 5.66820 5.89422 6.22195 6.32093 6.43530 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.389 5.389 3 C -0.050 4.050 4 C 0.544 3.456 5 O -0.519 6.519 6 O -0.340 6.340 7 C 0.081 3.919 8 C 0.242 3.758 9 H 0.108 0.892 10 O -0.382 6.382 11 C 0.052 3.948 12 C 0.077 3.923 13 H 0.122 0.878 14 N -0.569 5.569 15 C 0.576 3.424 16 O -0.480 6.480 17 C -0.160 4.160 18 C -0.160 4.160 19 C -0.045 4.045 20 C -0.084 4.084 21 C -0.084 4.084 22 C -0.043 4.043 23 C 0.577 3.423 24 O -0.487 6.487 25 C 0.051 3.949 26 O -0.382 6.382 27 C -0.061 4.061 28 C -0.196 4.196 29 Br 0.095 6.905 30 C 0.078 3.922 31 C -0.039 4.039 32 O -0.539 6.539 33 Si 0.626 3.374 34 H 0.090 0.910 35 H 0.108 0.892 36 H 0.098 0.902 37 H 0.109 0.891 38 H 0.108 0.892 39 H 0.074 0.926 40 H 0.114 0.886 41 H 0.153 0.847 42 H 0.175 0.825 43 H 0.176 0.824 44 H 0.156 0.844 45 H 0.075 0.925 46 H 0.115 0.885 47 H 0.174 0.826 48 H 0.147 0.853 49 H 0.387 0.613 50 H -0.264 1.264 51 H -0.280 1.280 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.335 2.274 1.103 9.672 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 N -0.063 5.063 3 C -0.161 4.161 4 C 0.390 3.610 5 O -0.408 6.408 6 O -0.257 6.257 7 C 0.008 3.992 8 C 0.147 3.853 9 H 0.125 0.875 10 O -0.301 6.301 11 C -0.026 4.026 12 C -0.025 4.025 13 H 0.139 0.861 14 N -0.313 5.313 15 C 0.368 3.632 16 O -0.353 6.353 17 C -0.163 4.163 18 C -0.163 4.163 19 C -0.064 4.064 20 C -0.102 4.102 21 C -0.102 4.102 22 C -0.061 4.061 23 C 0.368 3.632 24 O -0.360 6.360 25 C -0.026 4.026 26 O -0.302 6.302 27 C -0.087 4.087 28 C -0.281 4.281 29 Br 0.179 6.821 30 C -0.046 4.046 31 C -0.150 4.150 32 O -0.346 6.346 33 Si 0.527 3.473 34 H 0.109 0.891 35 H 0.126 0.874 36 H 0.116 0.884 37 H 0.127 0.873 38 H 0.126 0.874 39 H 0.092 0.908 40 H 0.132 0.868 41 H 0.171 0.829 42 H 0.193 0.807 43 H 0.193 0.807 44 H 0.173 0.827 45 H 0.093 0.907 46 H 0.133 0.867 47 H 0.191 0.809 48 H 0.165 0.835 49 H 0.236 0.764 50 H -0.190 1.190 51 H -0.205 1.205 Dipole moment (debyes) X Y Z Total from point charges -8.237 1.261 1.006 8.393 hybrid contribution -1.163 0.996 -0.831 1.742 sum -9.400 2.258 0.175 9.669 Atomic orbital electron populations 1.22578 0.73298 1.06120 1.05312 1.44154 1.08056 1.03641 1.50407 1.19383 0.90639 0.84277 1.21780 1.19689 0.80937 0.87679 0.72647 1.90927 1.55366 1.46802 1.47734 1.86689 1.24562 1.30397 1.84031 1.23346 0.90640 0.79506 1.05700 1.23840 0.90868 0.94697 0.75862 0.87471 1.88229 1.19875 1.79733 1.42302 1.23020 0.80348 1.01735 0.97465 1.22585 0.76643 1.04599 0.98719 0.86050 1.46449 1.07752 1.08896 1.68244 1.18713 0.88096 0.82827 0.73591 1.90798 1.74937 1.24670 1.44893 1.20458 0.92989 0.94865 1.08019 1.20442 0.93561 0.94264 1.08071 1.21159 0.89145 1.02263 0.93785 1.21956 0.99759 0.93634 0.94842 1.21965 0.97656 0.95765 0.94815 1.21164 0.90034 1.01298 0.93647 1.18747 0.86660 0.84279 0.73511 1.90828 1.83522 1.16565 1.45038 1.23025 0.80337 1.01800 0.97442 1.88223 1.19875 1.79722 1.42332 1.21328 0.95285 0.92620 0.99506 1.20639 0.91228 0.94281 1.21959 1.96318 1.32808 1.55583 1.97429 1.21140 0.89350 0.90537 1.03570 1.24733 0.93472 0.91904 1.04845 1.86563 1.29323 1.88975 1.29701 0.92692 0.92355 0.78217 0.84036 0.89139 0.87366 0.88373 0.87341 0.87406 0.90800 0.86752 0.82925 0.80737 0.80676 0.82663 0.90731 0.86709 0.80906 0.83522 0.76391 1.18986 1.20515 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.02 9.36 127.77 1.20 1.22 16 2 N -0.39 -1.33 3.16 -519.68 -1.64 -2.98 16 3 C -0.05 -0.31 6.88 40.31 0.28 -0.03 16 4 C 0.54 4.26 7.92 69.97 0.55 4.81 16 5 O -0.52 -6.16 16.68 19.43 0.32 -5.83 16 6 O -0.34 -1.77 7.45 -51.84 -0.39 -2.16 16 7 C 0.08 0.12 5.56 71.98 0.40 0.52 16 8 C 0.24 0.23 3.59 71.98 0.26 0.49 16 9 H 0.11 -0.31 8.14 -2.39 -0.02 -0.33 16 10 O -0.38 -1.12 10.44 -122.14 -1.27 -2.40 16 11 C 0.05 0.04 6.33 72.07 0.46 0.50 16 12 C 0.08 0.10 3.07 45.16 0.14 0.24 16 13 H 0.12 0.32 7.59 -2.38 -0.02 0.30 16 14 N -0.57 -1.05 2.53 -739.55 -1.87 -2.93 16 15 C 0.58 1.17 7.35 86.82 0.64 1.81 16 16 O -0.48 -2.56 15.18 -3.54 -0.05 -2.61 16 17 C -0.16 0.21 6.41 -20.00 -0.13 0.08 16 18 C -0.16 0.12 6.41 -20.00 -0.13 -0.01 16 19 C -0.04 0.26 10.09 22.44 0.23 0.49 16 20 C -0.08 0.90 10.04 22.36 0.22 1.13 16 21 C -0.08 0.93 10.04 22.36 0.22 1.15 16 22 C -0.04 0.28 10.09 22.44 0.23 0.51 16 23 C 0.58 2.03 8.02 86.82 0.70 2.73 16 24 O -0.49 -4.30 17.44 -3.56 -0.06 -4.36 16 25 C 0.05 0.04 6.32 72.07 0.46 0.50 16 26 O -0.38 -1.11 10.44 -122.14 -1.27 -2.39 16 27 C -0.06 -0.28 10.63 22.59 0.24 -0.04 16 28 C -0.20 -0.59 6.15 22.03 0.14 -0.45 16 29 Br 0.09 -0.01 28.23 -20.37 -0.58 -0.58 16 30 C 0.08 0.21 6.15 41.36 0.25 0.46 16 31 C -0.04 -0.03 2.88 71.24 0.21 0.18 16 32 O -0.54 -0.60 10.36 -148.98 -1.54 -2.14 16 33 Si 0.63 1.92 27.09 68.60 1.86 3.77 16 34 H 0.09 -0.11 8.14 -2.39 -0.02 -0.13 16 35 H 0.11 -0.08 6.77 -2.39 -0.02 -0.10 16 36 H 0.10 0.19 6.15 -2.39 -0.01 0.18 16 37 H 0.11 -0.02 8.14 -2.39 -0.02 -0.03 16 38 H 0.11 0.00 8.14 -2.39 -0.02 -0.02 16 39 H 0.07 0.09 6.72 -2.39 -0.02 0.08 16 40 H 0.11 -0.06 8.14 -2.39 -0.02 -0.08 16 41 H 0.15 -1.21 8.06 -2.91 -0.02 -1.24 16 42 H 0.18 -2.89 8.06 -2.91 -0.02 -2.92 16 43 H 0.18 -2.97 8.06 -2.91 -0.02 -2.99 16 44 H 0.16 -1.43 8.06 -2.91 -0.02 -1.45 16 45 H 0.07 0.10 6.65 -2.39 -0.02 0.08 16 46 H 0.11 -0.06 8.14 -2.39 -0.02 -0.08 16 47 H 0.17 0.44 8.06 -2.91 -0.02 0.42 16 48 H 0.15 -0.30 7.96 -2.39 -0.02 -0.32 16 49 H 0.39 -1.15 8.70 -74.06 -0.64 -1.79 16 50 H -0.26 -2.29 7.11 99.48 0.71 -1.59 16 51 H -0.28 -2.34 7.11 99.48 0.71 -1.63 16 Total: 0.00 -22.46 446.19 0.48 -21.98 By element: Atomic # 1 Polarization: -14.08 SS G_CDS: 0.44 Total: -13.65 kcal Atomic # 6 Polarization: 9.72 SS G_CDS: 6.55 Total: 16.27 kcal Atomic # 7 Polarization: -2.39 SS G_CDS: -3.52 Total: -5.91 kcal Atomic # 8 Polarization: -17.62 SS G_CDS: -4.27 Total: -21.89 kcal Atomic # 14 Polarization: 1.92 SS G_CDS: 1.86 Total: 3.77 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -0.58 Total: -0.58 kcal Total: -22.46 0.48 -21.98 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4999870_13594054.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.614 kcal (2) G-P(sol) polarization free energy of solvation -22.461 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.074 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.978 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.592 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds