Wall clock time and date at job start Sat Mar 6 2021 08:21:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.37691 * 125.67924 * 2 1 4 4 C 1.46484 * 126.23701 * 359.96484 * 3 2 1 5 5 O 1.21620 * 120.00062 * 180.02562 * 4 3 2 6 6 O 1.34893 * 120.00010 * 359.97438 * 4 3 2 7 7 C 1.45199 * 116.99840 * 180.02562 * 6 4 3 8 8 C 1.53001 * 109.46895 * 179.97438 * 7 6 4 9 9 H 1.08993 * 112.85242 * 316.19510 * 8 7 6 10 10 C 1.54058 * 113.69378 * 87.46918 * 8 7 6 11 11 C 1.53781 * 86.98631 * 139.98814 * 10 8 7 12 12 H 1.09000 * 113.61131 * 219.97328 * 11 10 8 13 13 N 1.46507 * 113.61250 * 89.16123 * 11 10 8 14 14 C 1.34773 * 119.99871 * 105.86524 * 13 11 10 15 15 O 1.21508 * 120.00003 * 359.97438 * 14 13 11 16 16 O 1.34637 * 119.99964 * 179.72071 * 14 13 11 17 17 C 1.45192 * 117.00248 * 179.97438 * 16 14 13 18 18 C 1.53005 * 109.47140 * 60.00109 * 17 16 14 19 19 C 1.52998 * 109.47224 * 180.02562 * 17 16 14 20 20 C 1.52996 * 109.47434 * 300.00131 * 17 16 14 21 21 C 1.53778 * 87.17321 * 334.57016 * 11 10 8 22 22 C 1.37990 * 107.52400 * 180.22828 * 3 2 1 23 23 C 1.39823 * 107.08581 * 359.63672 * 22 3 2 24 24 Br 1.89096 * 126.06469 * 180.13389 * 23 22 3 25 25 C 1.35548 * 107.86718 * 0.36690 * 23 22 3 26 26 C 1.50692 * 125.55840 * 179.75161 * 25 23 22 27 27 O 1.42902 * 109.47207 * 122.39046 * 26 25 23 28 28 Si 1.86304 * 109.47179 * 242.38580 * 26 25 23 29 29 H 1.08995 * 109.47059 * 90.02430 * 1 2 3 30 30 H 1.09000 * 109.46848 * 210.02233 * 1 2 3 31 31 H 1.09001 * 109.46922 * 330.02165 * 1 2 3 32 32 H 1.08998 * 109.47718 * 60.00232 * 7 6 4 33 33 H 1.08997 * 109.47218 * 299.99750 * 7 6 4 34 34 H 1.09000 * 113.61408 * 25.48155 * 10 8 7 35 35 H 1.09007 * 113.69212 * 254.50421 * 10 8 7 36 36 H 0.96995 * 119.99841 * 285.86084 * 13 11 10 37 37 H 1.09002 * 109.46717 * 59.99761 * 18 17 16 38 38 H 1.08993 * 109.47080 * 179.97438 * 18 17 16 39 39 H 1.09000 * 109.46798 * 300.00352 * 18 17 16 40 40 H 1.08997 * 109.47609 * 60.00215 * 19 17 16 41 41 H 1.09005 * 109.47179 * 180.02562 * 19 17 16 42 42 H 1.09007 * 109.47260 * 299.99782 * 19 17 16 43 43 H 1.09004 * 109.47262 * 60.00062 * 20 17 16 44 44 H 1.09004 * 109.47389 * 179.97438 * 20 17 16 45 45 H 1.09001 * 109.47393 * 300.00279 * 20 17 16 46 46 H 1.08997 * 113.61673 * 140.02650 * 21 11 10 47 47 H 1.09002 * 113.61033 * 270.92726 * 21 11 10 48 48 H 1.08004 * 126.45497 * 179.77625 * 22 3 2 49 49 H 1.09002 * 109.47479 * 2.39117 * 26 25 23 50 50 H 0.96694 * 114.00581 * 180.02562 * 27 26 25 51 51 H 1.48494 * 109.99944 * 294.19245 * 28 26 25 52 52 H 1.48498 * 109.99689 * 55.51391 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2681 1.1185 0.0000 4 6 1.8134 2.5109 -0.0007 5 8 2.6259 3.4159 -0.0011 6 8 0.4936 2.7895 -0.0020 7 6 0.1158 4.1914 -0.0032 8 6 -1.4098 4.3085 -0.0052 9 1 -1.8864 3.6177 -0.7007 10 6 -2.0336 4.2945 1.4033 11 6 -2.9971 5.3817 0.8990 12 1 -3.1929 6.1653 1.6309 13 7 -4.2211 4.8475 0.2964 14 6 -5.3885 4.9188 0.9661 15 8 -5.4258 5.4257 2.0697 16 8 -6.5143 4.4329 0.4100 17 6 -7.7348 4.5431 1.1887 18 6 -8.0230 6.0174 1.4793 19 6 -8.8992 3.9412 0.3996 20 6 -7.5682 3.7863 2.5079 21 6 -1.9165 5.7551 -0.1294 22 6 3.5793 0.6885 -0.0052 23 6 3.5533 -0.7095 0.0001 24 35 5.0608 -1.8510 0.0000 25 6 2.2556 -1.1012 0.0000 26 6 1.7710 -2.5281 -0.0004 27 8 0.9345 -2.7474 1.1372 28 14 0.8003 -2.8538 -1.5569 29 1 -0.3633 -0.0004 -1.0276 30 1 -0.3633 -0.8898 0.5142 31 1 -0.3633 0.8902 0.5135 32 1 0.5180 4.6755 -0.8932 33 1 0.5166 4.6765 0.8868 34 1 -1.3561 4.6396 2.1844 35 1 -2.5274 3.3557 1.6544 36 1 -4.1912 4.4426 -0.5845 37 1 -8.1417 6.5565 0.5394 38 1 -8.9395 6.1001 2.0635 39 1 -7.1933 6.4457 2.0416 40 1 -8.6938 2.8909 0.1929 41 1 -9.8156 4.0243 0.9840 42 1 -9.0182 4.4801 -0.5405 43 1 -6.7386 4.2147 3.0703 44 1 -8.4844 3.8694 3.0927 45 1 -7.3629 2.7360 2.3009 46 1 -2.3157 5.9949 -1.1148 47 1 -1.2070 6.4989 0.2334 48 1 4.4598 1.3140 -0.0100 49 1 2.6264 -3.2024 0.0422 50 1 0.5861 -3.6471 1.2017 51 1 -0.4425 -2.0411 -1.5597 52 1 1.6247 -2.5255 -2.7476 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_4999870_15734084.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:21:21 Heat of formation + Delta-G solvation = -110.070579 kcal Electronic energy + Delta-G solvation = -35941.256606 eV Core-core repulsion = 30956.387810 eV Total energy + Delta-G solvation = -4984.868796 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 445.102 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -43.05463 -42.01112 -41.36056 -40.33447 -38.11708 -37.78347 -37.53849 -35.40543 -34.72974 -34.13313 -32.48731 -31.28871 -29.85722 -28.39918 -28.32995 -27.58106 -27.25809 -26.80794 -24.80677 -23.68681 -23.04189 -21.74634 -21.21130 -20.97795 -20.29119 -19.37811 -19.09200 -18.57263 -18.20168 -17.82477 -17.64150 -17.25021 -16.99197 -16.69713 -16.61658 -15.97071 -15.85849 -15.50921 -15.38633 -15.27354 -14.95906 -14.78217 -14.56059 -14.43774 -14.37307 -14.25729 -13.99240 -13.76022 -13.69963 -13.43244 -13.38945 -13.27481 -13.09833 -12.95168 -12.89973 -12.83565 -12.57194 -12.37262 -12.31760 -12.09065 -12.06110 -11.98720 -11.96666 -11.67472 -11.43181 -11.35012 -11.27510 -11.16443 -10.67292 -10.25081 -10.00180 -9.52953 -5.09484 -0.25557 0.44768 0.77014 1.07785 1.16498 1.21133 1.54489 1.60761 1.68197 1.69565 1.88153 3.01943 3.05737 3.22589 3.31311 3.42200 3.57666 3.59275 3.68773 3.71046 3.76970 3.78791 3.91309 3.95484 4.07322 4.11274 4.23223 4.26652 4.32091 4.38846 4.41827 4.44316 4.54852 4.57694 4.58365 4.67366 4.68776 4.73542 4.79131 4.84861 4.85039 4.87414 4.95324 4.99231 5.04030 5.08086 5.15254 5.24039 5.28415 5.35585 5.42327 5.56757 5.62856 6.32814 6.40765 6.76846 7.28563 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.051 3.949 2 N -0.399 5.399 3 C -0.046 4.046 4 C 0.545 3.455 5 O -0.520 6.520 6 O -0.351 6.351 7 C 0.073 3.927 8 C -0.102 4.102 9 H 0.113 0.887 10 C -0.146 4.146 11 C 0.133 3.867 12 H 0.096 0.904 13 N -0.683 5.683 14 C 0.646 3.354 15 O -0.592 6.592 16 O -0.369 6.369 17 C 0.128 3.872 18 C -0.181 4.181 19 C -0.138 4.138 20 C -0.180 4.180 21 C -0.120 4.120 22 C -0.078 4.078 23 C -0.185 4.185 24 Br -0.005 7.005 25 C 0.100 3.900 26 C -0.064 4.064 27 O -0.555 6.555 28 Si 0.779 3.221 29 H 0.088 0.912 30 H 0.114 0.886 31 H 0.110 0.890 32 H 0.079 0.921 33 H 0.077 0.923 34 H 0.098 0.902 35 H 0.068 0.932 36 H 0.417 0.583 37 H 0.062 0.938 38 H 0.086 0.914 39 H 0.063 0.937 40 H 0.070 0.930 41 H 0.098 0.902 42 H 0.069 0.931 43 H 0.062 0.938 44 H 0.086 0.914 45 H 0.062 0.938 46 H 0.096 0.904 47 H 0.115 0.885 48 H 0.166 0.834 49 H 0.107 0.893 50 H 0.412 0.588 51 H -0.258 1.258 52 H -0.299 1.299 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.992 -5.752 -3.117 8.871 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 N -0.074 5.074 3 C -0.157 4.157 4 C 0.391 3.609 5 O -0.410 6.410 6 O -0.268 6.268 7 C 0.000 4.000 8 C -0.120 4.120 9 H 0.131 0.869 10 C -0.185 4.185 11 C 0.028 3.972 12 H 0.114 0.886 13 N -0.343 5.343 14 C 0.400 3.600 15 O -0.483 6.483 16 O -0.283 6.283 17 C 0.092 3.908 18 C -0.238 4.238 19 C -0.195 4.195 20 C -0.237 4.237 21 C -0.158 4.158 22 C -0.104 4.104 23 C -0.270 4.270 24 Br 0.079 6.921 25 C -0.022 4.022 26 C -0.173 4.173 27 O -0.366 6.366 28 Si 0.681 3.319 29 H 0.106 0.894 30 H 0.132 0.868 31 H 0.129 0.871 32 H 0.097 0.903 33 H 0.095 0.905 34 H 0.117 0.883 35 H 0.087 0.913 36 H 0.254 0.746 37 H 0.081 0.919 38 H 0.105 0.895 39 H 0.082 0.918 40 H 0.089 0.911 41 H 0.117 0.883 42 H 0.088 0.912 43 H 0.081 0.919 44 H 0.105 0.895 45 H 0.081 0.919 46 H 0.115 0.885 47 H 0.133 0.867 48 H 0.184 0.816 49 H 0.125 0.875 50 H 0.266 0.734 51 H -0.184 1.184 52 H -0.226 1.226 Dipole moment (debyes) X Y Z Total from point charges -5.987 -4.604 -3.162 8.188 hybrid contribution 0.519 0.814 0.139 0.975 sum -5.468 -3.791 -3.023 7.308 Atomic orbital electron populations 1.22830 0.73588 1.07440 1.05007 1.44186 1.08094 1.03919 1.51163 1.19433 0.90541 0.84608 1.21133 1.19573 0.81365 0.87227 0.72741 1.90924 1.55581 1.46890 1.47585 1.86576 1.23960 1.32300 1.83974 1.23396 0.96052 0.77144 1.03438 1.22735 0.91317 0.99182 0.98782 0.86921 1.23625 0.98194 0.99689 0.96952 1.21788 0.81753 0.96746 0.96872 0.88638 1.44346 1.04381 1.63605 1.21927 1.18310 0.81730 0.77201 0.82789 1.90914 1.86321 1.49985 1.21082 1.86308 1.16684 1.76033 1.49292 1.22356 0.80515 0.96730 0.91248 1.22481 1.03756 0.94729 1.02815 1.21894 0.95128 1.01645 1.00808 1.22472 1.04262 1.00257 0.96726 1.23324 0.96377 0.95575 1.00496 1.21384 0.95407 0.93058 1.00588 1.20962 0.92098 0.94356 1.19622 1.96661 1.35234 1.61968 1.98208 1.20164 0.88957 0.89366 1.03761 1.24601 1.01282 0.89677 1.01755 1.86395 1.67046 1.38602 1.44561 0.94541 0.77379 0.88884 0.71139 0.89367 0.86768 0.87123 0.90257 0.90503 0.88334 0.91282 0.74563 0.91918 0.89484 0.91782 0.91105 0.88323 0.91169 0.91863 0.89474 0.91868 0.88525 0.86703 0.81619 0.87509 0.73440 1.18360 1.22639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.05 8.62 127.77 1.10 1.05 16 2 N -0.40 -1.82 3.12 -519.67 -1.62 -3.44 16 3 C -0.05 -0.36 6.88 40.31 0.28 -0.08 16 4 C 0.55 4.31 7.92 69.97 0.55 4.87 16 5 O -0.52 -6.71 16.68 19.44 0.32 -6.39 16 6 O -0.35 -0.87 7.65 -58.08 -0.44 -1.31 16 7 C 0.07 -0.12 5.32 71.98 0.38 0.26 16 8 C -0.10 0.61 3.91 -10.17 -0.04 0.57 16 9 H 0.11 -0.84 8.14 -2.39 -0.02 -0.86 16 10 C -0.15 0.50 7.45 31.22 0.23 0.74 16 11 C 0.13 -0.36 4.30 45.52 0.20 -0.16 16 12 H 0.10 0.10 7.50 -2.39 -0.02 0.08 16 13 N -0.68 0.83 5.27 -567.61 -2.99 -2.16 16 14 C 0.65 3.56 8.06 129.79 1.05 4.61 16 15 O -0.59 -6.63 11.50 19.82 0.23 -6.40 16 16 O -0.37 -1.60 9.94 -55.46 -0.55 -2.15 16 17 C 0.13 0.27 1.13 -10.79 -0.01 0.26 16 18 C -0.18 -0.47 8.37 71.98 0.60 0.13 16 19 C -0.14 0.41 8.85 71.98 0.64 1.04 16 20 C -0.18 -0.45 8.37 71.98 0.60 0.15 16 21 C -0.12 0.90 7.38 31.12 0.23 1.13 16 22 C -0.08 -0.63 10.63 22.59 0.24 -0.39 16 23 C -0.18 -1.24 6.53 22.03 0.14 -1.09 16 24 Br 0.00 -0.02 33.05 -20.37 -0.67 -0.69 16 25 C 0.10 0.44 5.18 41.36 0.21 0.66 16 26 C -0.06 0.17 2.78 71.23 0.20 0.37 16 27 O -0.55 2.72 11.47 -148.98 -1.71 1.01 16 28 Si 0.78 -4.15 31.20 68.60 2.14 -2.01 16 29 H 0.09 -0.22 7.29 -2.39 -0.02 -0.24 16 30 H 0.11 -0.35 6.13 -2.39 -0.01 -0.36 16 31 H 0.11 -0.19 6.15 -2.39 -0.01 -0.21 16 32 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 33 H 0.08 -0.08 7.85 -2.39 -0.02 -0.10 16 34 H 0.10 -0.34 7.91 -2.39 -0.02 -0.36 16 35 H 0.07 -0.09 8.14 -2.38 -0.02 -0.11 16 36 H 0.42 -2.44 8.81 -92.71 -0.82 -3.25 16 37 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 38 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 39 H 0.06 0.51 5.87 -2.39 -0.01 0.50 16 40 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 41 H 0.10 -0.60 8.14 -2.38 -0.02 -0.62 16 42 H 0.07 -0.22 8.14 -2.38 -0.02 -0.24 16 43 H 0.06 0.50 5.89 -2.38 -0.01 0.49 16 44 H 0.09 -0.07 8.14 -2.38 -0.02 -0.09 16 45 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 46 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 47 H 0.11 -1.02 8.10 -2.39 -0.02 -1.04 16 48 H 0.17 1.14 8.06 -2.91 -0.02 1.11 16 49 H 0.11 -0.47 6.94 -2.39 -0.02 -0.49 16 50 H 0.41 -6.44 8.74 -74.06 -0.65 -7.09 16 51 H -0.26 0.80 5.91 99.48 0.59 1.39 16 52 H -0.30 -0.96 7.11 99.48 0.71 -0.25 16 Total: 0.00 -23.14 439.39 0.74 -22.40 By element: Atomic # 1 Polarization: -12.39 SS G_CDS: -0.57 Total: -12.97 kcal Atomic # 6 Polarization: 7.50 SS G_CDS: 6.61 Total: 14.11 kcal Atomic # 7 Polarization: -0.99 SS G_CDS: -4.61 Total: -5.60 kcal Atomic # 8 Polarization: -13.09 SS G_CDS: -2.15 Total: -15.24 kcal Atomic # 14 Polarization: -4.15 SS G_CDS: 2.14 Total: -2.01 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -0.67 Total: -0.69 kcal Total: -23.14 0.74 -22.40 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4999870_15734084.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.671 kcal (2) G-P(sol) polarization free energy of solvation -23.139 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.810 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.739 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.400 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.071 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds