Wall clock time and date at job start Sat Mar 6 2021 08:21:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.37697 * 125.68124 * 2 1 4 4 C 1.46487 * 126.23575 * 359.97438 * 3 2 1 5 5 O 1.21618 * 119.99965 * 180.02562 * 4 3 2 6 6 O 1.34895 * 119.99907 * 0.02562 * 4 3 2 7 7 C 1.45197 * 116.99917 * 179.97438 * 6 4 3 8 8 C 1.53007 * 109.47037 * 180.02562 * 7 6 4 9 9 H 1.08997 * 112.85121 * 316.19661 * 8 7 6 10 10 C 1.53777 * 113.61363 * 87.50399 * 8 7 6 11 11 C 1.53777 * 87.08041 * 139.98064 * 10 8 7 12 12 H 1.08997 * 113.69087 * 89.12839 * 11 10 8 13 13 N 1.46503 * 113.61403 * 220.01458 * 11 10 8 14 14 C 1.34772 * 120.00228 * 252.49709 * 13 11 10 15 15 O 1.21516 * 120.00006 * 0.02562 * 14 13 11 16 16 O 1.34642 * 120.00039 * 180.02562 * 14 13 11 17 17 C 1.45201 * 116.99940 * 179.97438 * 16 14 13 18 18 C 1.52999 * 109.46922 * 60.00361 * 17 16 14 19 19 C 1.53002 * 109.47115 * 179.97438 * 17 16 14 20 20 C 1.52993 * 109.47115 * 300.00119 * 17 16 14 21 21 C 1.53770 * 87.08187 * 334.56608 * 11 10 8 22 22 C 1.37989 * 107.52660 * 180.02562 * 3 2 1 23 23 C 1.39819 * 107.08515 * 359.97438 * 22 3 2 24 24 Br 1.89104 * 126.06608 * 179.97438 * 23 22 3 25 25 C 1.35545 * 107.86740 * 0.26596 * 23 22 3 26 26 C 1.50700 * 125.55838 * 179.74012 * 25 23 22 27 27 O 1.42904 * 109.47358 * 122.23425 * 26 25 23 28 28 Si 1.86306 * 109.47166 * 242.23030 * 26 25 23 29 29 H 1.08996 * 109.46954 * 89.97621 * 1 2 3 30 30 H 1.09003 * 109.47053 * 209.98035 * 1 2 3 31 31 H 1.09004 * 109.47192 * 329.97689 * 1 2 3 32 32 H 1.09003 * 109.47067 * 299.99586 * 7 6 4 33 33 H 1.08994 * 109.47443 * 60.00131 * 7 6 4 34 34 H 1.09000 * 113.61304 * 254.52994 * 10 8 7 35 35 H 1.08998 * 113.61742 * 25.43331 * 10 8 7 36 36 H 0.97006 * 119.99739 * 72.49978 * 13 11 10 37 37 H 1.09001 * 109.47689 * 59.99372 * 18 17 16 38 38 H 1.08997 * 109.47192 * 179.97438 * 18 17 16 39 39 H 1.09007 * 109.47132 * 299.99459 * 18 17 16 40 40 H 1.09008 * 109.46724 * 60.00165 * 19 17 16 41 41 H 1.08997 * 109.47177 * 180.02562 * 19 17 16 42 42 H 1.09004 * 109.47122 * 300.00584 * 19 17 16 43 43 H 1.09001 * 109.47119 * 60.00648 * 20 17 16 44 44 H 1.09005 * 109.47030 * 180.02562 * 20 17 16 45 45 H 1.08998 * 109.47602 * 299.99464 * 20 17 16 46 46 H 1.09003 * 113.61638 * 270.88246 * 21 11 10 47 47 H 1.08999 * 113.69239 * 139.99379 * 21 11 10 48 48 H 1.07999 * 126.45429 * 180.02562 * 22 3 2 49 49 H 1.09001 * 109.47384 * 2.23147 * 26 25 23 50 50 H 0.96695 * 114.00182 * 180.02562 * 27 26 25 51 51 H 1.48500 * 109.99687 * 294.19410 * 28 26 25 52 52 H 1.48499 * 109.99534 * 55.51239 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2681 1.1185 0.0000 4 6 1.8134 2.5110 -0.0005 5 8 2.6259 3.4160 -0.0009 6 8 0.4936 2.7895 -0.0006 7 6 0.1157 4.1915 -0.0005 8 6 -1.4099 4.3085 0.0001 9 1 -1.8876 3.6181 -0.6949 10 6 -2.0282 4.2946 1.4080 11 6 -2.9943 5.3819 0.9089 12 1 -3.9068 4.9859 0.4634 13 7 -3.2529 6.4345 1.8946 14 6 -4.4466 6.4962 2.5171 15 8 -5.3083 5.6785 2.2613 16 8 -4.6845 7.4639 3.4226 17 6 -5.9924 7.4695 4.0532 18 6 -6.2057 6.1495 4.7967 19 6 -6.0754 8.6318 5.0447 20 6 -7.0737 7.6329 2.9833 21 6 -1.9167 5.7552 -0.1226 22 6 3.5793 0.6885 -0.0006 23 6 3.5532 -0.7094 -0.0003 24 35 5.0608 -1.8510 -0.0016 25 6 2.2556 -1.1011 -0.0056 26 6 1.7710 -2.5281 -0.0128 27 8 0.9341 -2.7527 1.1235 28 14 0.8007 -2.8465 -1.5711 29 1 -0.3633 0.0004 -1.0276 30 1 -0.3633 -0.8902 0.5135 31 1 -0.3634 0.8898 0.5142 32 1 0.5172 4.6760 0.8896 33 1 0.5173 4.6761 -0.8904 34 1 -2.5204 3.3551 1.6594 35 1 -1.3481 4.6390 2.1870 36 1 -2.5649 7.0870 2.0991 37 1 -5.4353 6.0330 5.5589 38 1 -7.1873 6.1539 5.2705 39 1 -6.1464 5.3211 4.0907 40 1 -5.9232 9.5725 4.5154 41 1 -7.0571 8.6358 5.5185 42 1 -5.3050 8.5150 5.8069 43 1 -7.0144 6.8045 2.2774 44 1 -8.0555 7.6376 3.4568 45 1 -6.9218 8.5734 2.4537 46 1 -1.2061 6.4989 0.2379 47 1 -2.3176 5.9953 -1.1073 48 1 4.4598 1.3140 -0.0004 49 1 2.6263 -3.2025 0.0268 50 1 0.5857 -3.6527 1.1837 51 1 -0.4421 -2.0337 -1.5705 52 1 1.6255 -2.5127 -2.7600 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_4999870_15734238.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 08:21:25 Heat of formation + Delta-G solvation = -112.383778 kcal Electronic energy + Delta-G solvation = -35608.837509 eV Core-core repulsion = 30623.868405 eV Total energy + Delta-G solvation = -4984.969104 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 445.102 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.05080 -41.95766 -41.36557 -40.27520 -38.14141 -37.78211 -37.53790 -35.44592 -34.72560 -34.26314 -32.48429 -31.28606 -29.83560 -28.40138 -28.33541 -27.57251 -27.24522 -26.80960 -24.92082 -23.66309 -22.45361 -21.75901 -21.46361 -20.99000 -20.48642 -19.22497 -19.01299 -18.57794 -18.34956 -17.82432 -17.71200 -17.22007 -17.02694 -16.73952 -16.49480 -16.28163 -15.80738 -15.57634 -15.42423 -15.17205 -14.84104 -14.77905 -14.51826 -14.40694 -14.31008 -14.19971 -13.92791 -13.70047 -13.56084 -13.49650 -13.39381 -13.22209 -13.05456 -12.94078 -12.90215 -12.81539 -12.58256 -12.51945 -12.34142 -12.16793 -12.08673 -11.97742 -11.96450 -11.76414 -11.43071 -11.36569 -11.34314 -11.14350 -10.66957 -10.20777 -9.99713 -9.52660 -5.09298 -0.25277 0.45106 0.77352 1.08207 1.20127 1.22807 1.55008 1.61378 1.69158 1.69761 1.88467 3.02274 3.08580 3.23089 3.32496 3.42983 3.59140 3.60179 3.67574 3.70816 3.76406 3.76964 3.91086 3.95747 4.06931 4.09836 4.17840 4.24651 4.28677 4.39595 4.42567 4.46530 4.54807 4.57999 4.59487 4.64268 4.70981 4.73109 4.74872 4.82425 4.84210 4.89001 4.94729 5.00678 5.04414 5.08281 5.16416 5.23651 5.28413 5.36139 5.44224 5.55513 5.63276 6.34986 6.40730 6.77073 7.29387 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.399 5.399 3 C -0.046 4.046 4 C 0.546 3.454 5 O -0.520 6.520 6 O -0.351 6.351 7 C 0.076 3.924 8 C -0.099 4.099 9 H 0.116 0.884 10 C -0.147 4.147 11 C 0.137 3.863 12 H 0.110 0.890 13 N -0.691 5.691 14 C 0.643 3.357 15 O -0.593 6.593 16 O -0.371 6.371 17 C 0.127 3.873 18 C -0.180 4.180 19 C -0.138 4.138 20 C -0.179 4.179 21 C -0.122 4.122 22 C -0.077 4.077 23 C -0.185 4.185 24 Br -0.005 7.005 25 C 0.099 3.901 26 C -0.064 4.064 27 O -0.555 6.555 28 Si 0.779 3.221 29 H 0.088 0.912 30 H 0.114 0.886 31 H 0.111 0.889 32 H 0.077 0.923 33 H 0.080 0.920 34 H 0.073 0.927 35 H 0.090 0.910 36 H 0.417 0.583 37 H 0.060 0.940 38 H 0.087 0.913 39 H 0.064 0.936 40 H 0.069 0.931 41 H 0.098 0.902 42 H 0.068 0.932 43 H 0.064 0.936 44 H 0.087 0.913 45 H 0.062 0.938 46 H 0.106 0.894 47 H 0.096 0.904 48 H 0.167 0.833 49 H 0.107 0.893 50 H 0.412 0.588 51 H -0.259 1.259 52 H -0.299 1.299 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.155 -3.031 -0.316 5.153 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 N -0.073 5.073 3 C -0.157 4.157 4 C 0.391 3.609 5 O -0.409 6.409 6 O -0.268 6.268 7 C 0.003 3.997 8 C -0.118 4.118 9 H 0.134 0.866 10 C -0.185 4.185 11 C 0.033 3.967 12 H 0.128 0.872 13 N -0.350 5.350 14 C 0.397 3.603 15 O -0.484 6.484 16 O -0.285 6.285 17 C 0.090 3.910 18 C -0.237 4.237 19 C -0.195 4.195 20 C -0.237 4.237 21 C -0.160 4.160 22 C -0.104 4.104 23 C -0.270 4.270 24 Br 0.079 6.921 25 C -0.023 4.023 26 C -0.173 4.173 27 O -0.366 6.366 28 Si 0.680 3.320 29 H 0.106 0.894 30 H 0.133 0.867 31 H 0.130 0.870 32 H 0.095 0.905 33 H 0.098 0.902 34 H 0.092 0.908 35 H 0.109 0.891 36 H 0.254 0.746 37 H 0.079 0.921 38 H 0.106 0.894 39 H 0.083 0.917 40 H 0.088 0.912 41 H 0.117 0.883 42 H 0.087 0.913 43 H 0.083 0.917 44 H 0.105 0.895 45 H 0.081 0.919 46 H 0.125 0.875 47 H 0.115 0.885 48 H 0.184 0.816 49 H 0.125 0.875 50 H 0.266 0.734 51 H -0.184 1.184 52 H -0.227 1.227 Dipole moment (debyes) X Y Z Total from point charges -4.521 -2.470 -0.962 5.241 hybrid contribution 0.644 1.076 0.392 1.314 sum -3.878 -1.395 -0.570 4.160 Atomic orbital electron populations 1.22840 0.73567 1.07503 1.05027 1.44190 1.08102 1.03924 1.51126 1.19433 0.90537 0.84600 1.21145 1.19565 0.81323 0.87233 0.72733 1.90923 1.55558 1.46876 1.47591 1.86576 1.24006 1.32245 1.83983 1.23340 0.95728 0.77189 1.03460 1.22342 0.91507 0.99127 0.98779 0.86591 1.23627 0.98350 0.99654 0.96912 1.22537 0.98245 0.87319 0.88593 0.87214 1.44781 1.13217 1.34243 1.42761 1.18429 0.83595 0.79853 0.78437 1.90901 1.45972 1.43572 1.67995 1.86317 1.39228 1.50321 1.52667 1.22355 0.78201 0.97781 0.92614 1.22471 1.03508 0.97023 1.00685 1.21896 1.04231 0.95815 0.97567 1.22468 0.99026 1.02777 0.99396 1.23360 0.96799 0.95617 1.00204 1.21381 0.95399 0.93046 1.00587 1.20958 0.92080 0.94361 1.19602 1.96661 1.35230 1.61981 1.98208 1.20168 0.88977 0.89371 1.03784 1.24591 1.01250 0.89676 1.01739 1.86396 1.67028 1.38613 1.44556 0.94548 0.77379 0.88917 0.71151 0.89403 0.86740 0.87028 0.90494 0.90173 0.90848 0.89144 0.74590 0.92073 0.89448 0.91731 0.91173 0.88292 0.91270 0.91715 0.89461 0.91941 0.87535 0.88496 0.81593 0.87490 0.73445 1.18402 1.22674 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.04 8.62 127.77 1.10 1.06 16 2 N -0.40 -1.87 3.12 -519.67 -1.62 -3.49 16 3 C -0.05 -0.36 6.88 40.31 0.28 -0.08 16 4 C 0.55 4.26 7.92 69.97 0.55 4.82 16 5 O -0.52 -6.59 16.68 19.45 0.32 -6.26 16 6 O -0.35 -0.87 7.65 -58.10 -0.44 -1.32 16 7 C 0.08 -0.13 5.32 71.98 0.38 0.25 16 8 C -0.10 0.56 4.02 -10.27 -0.04 0.52 16 9 H 0.12 -0.76 8.14 -2.39 -0.02 -0.78 16 10 C -0.15 0.53 7.43 31.12 0.23 0.76 16 11 C 0.14 -0.39 4.24 45.51 0.19 -0.19 16 12 H 0.11 0.03 7.46 -2.39 -0.02 0.01 16 13 N -0.69 0.39 5.36 -567.63 -3.04 -2.66 16 14 C 0.64 3.94 8.06 129.79 1.05 4.99 16 15 O -0.59 -6.68 11.48 19.79 0.23 -6.45 16 16 O -0.37 -1.97 9.94 -55.51 -0.55 -2.52 16 17 C 0.13 0.36 1.13 -10.80 -0.01 0.35 16 18 C -0.18 -0.57 8.37 71.98 0.60 0.03 16 19 C -0.14 0.28 8.85 71.98 0.64 0.92 16 20 C -0.18 -0.53 8.37 71.98 0.60 0.08 16 21 C -0.12 0.91 7.39 31.12 0.23 1.14 16 22 C -0.08 -0.62 10.63 22.59 0.24 -0.38 16 23 C -0.18 -1.24 6.53 22.03 0.14 -1.09 16 24 Br 0.00 -0.02 33.05 -20.37 -0.67 -0.69 16 25 C 0.10 0.45 5.18 41.36 0.21 0.66 16 26 C -0.06 0.16 2.78 71.24 0.20 0.35 16 27 O -0.55 2.63 11.46 -148.98 -1.71 0.92 16 28 Si 0.78 -3.89 31.21 68.60 2.14 -1.75 16 29 H 0.09 -0.19 7.27 -2.39 -0.02 -0.20 16 30 H 0.11 -0.32 6.15 -2.39 -0.01 -0.34 16 31 H 0.11 -0.18 6.15 -2.38 -0.01 -0.20 16 32 H 0.08 -0.11 7.84 -2.39 -0.02 -0.13 16 33 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 34 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 35 H 0.09 -0.31 7.89 -2.39 -0.02 -0.33 16 36 H 0.42 -2.04 8.84 -92.70 -0.82 -2.86 16 37 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 38 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 39 H 0.06 0.54 5.88 -2.38 -0.01 0.52 16 40 H 0.07 -0.16 8.14 -2.38 -0.02 -0.18 16 41 H 0.10 -0.53 8.14 -2.39 -0.02 -0.54 16 42 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 43 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 44 H 0.09 -0.04 8.14 -2.38 -0.02 -0.06 16 45 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 46 H 0.11 -1.01 8.08 -2.39 -0.02 -1.03 16 47 H 0.10 -0.83 8.14 -2.39 -0.02 -0.85 16 48 H 0.17 1.12 8.06 -2.91 -0.02 1.09 16 49 H 0.11 -0.46 6.94 -2.39 -0.02 -0.48 16 50 H 0.41 -6.35 8.74 -74.06 -0.65 -7.00 16 51 H -0.26 0.68 5.91 99.48 0.59 1.27 16 52 H -0.30 -1.06 7.11 99.48 0.71 -0.36 16 Total: 0.00 -22.92 439.44 0.68 -22.24 By element: Atomic # 1 Polarization: -11.62 SS G_CDS: -0.57 Total: -12.20 kcal Atomic # 6 Polarization: 7.58 SS G_CDS: 6.60 Total: 14.18 kcal Atomic # 7 Polarization: -1.48 SS G_CDS: -4.66 Total: -6.14 kcal Atomic # 8 Polarization: -13.48 SS G_CDS: -2.15 Total: -15.64 kcal Atomic # 14 Polarization: -3.89 SS G_CDS: 2.14 Total: -1.75 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -0.67 Total: -0.69 kcal Total: -22.92 0.68 -22.24 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4999870_15734238.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.143 kcal (2) G-P(sol) polarization free energy of solvation -22.920 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.063 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.679 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.241 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.384 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds