Wall clock time and date at job start Sat Mar 6 2021 09:01:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42891 * 114.00141 * 2 1 4 4 C 1.53002 * 112.85435 * 294.60736 * 3 2 1 5 5 F 1.39903 * 109.47019 * 65.45579 * 4 3 2 6 6 F 1.39902 * 109.47525 * 185.45891 * 4 3 2 7 7 F 1.39898 * 109.46981 * 305.46106 * 4 3 2 8 8 C 1.53783 * 113.61762 * 163.41123 * 3 2 1 9 9 C 1.54049 * 86.98697 * 270.84268 * 8 3 2 10 10 H 1.09007 * 113.61776 * 220.02311 * 9 8 3 11 11 C 1.53001 * 113.69389 * 89.11938 * 9 8 3 12 12 O 1.45206 * 109.46602 * 87.47411 * 11 9 8 13 13 C 1.34893 * 116.99336 * 180.02562 * 12 11 9 14 14 O 1.21622 * 120.00468 * 359.97438 * 13 12 11 15 15 C 1.46488 * 119.99592 * 179.97438 * 13 12 11 16 16 C 1.37990 * 126.23692 * 179.68201 * 15 13 12 17 17 C 1.39821 * 107.08330 * 179.90309 * 16 15 13 18 18 Br 1.89104 * 126.06555 * 180.13491 * 17 16 15 19 19 C 1.35542 * 107.86940 * 0.36445 * 17 16 15 20 20 C 1.50700 * 125.56078 * 179.75048 * 19 17 16 21 21 O 1.42897 * 109.47380 * 210.01974 * 20 19 17 22 22 Si 1.86301 * 109.47502 * 330.02589 * 20 19 17 23 23 N 1.35558 * 108.87947 * 359.77435 * 19 17 16 24 24 C 1.46501 * 125.68080 * 179.97438 * 23 19 17 25 25 C 1.53780 * 113.61577 * 65.80601 * 3 2 1 26 26 H 1.08994 * 109.47281 * 66.39027 * 1 2 3 27 27 H 1.09002 * 109.46712 * 306.39602 * 1 2 3 28 28 H 1.08998 * 109.47162 * 186.39633 * 1 2 3 29 29 H 1.09005 * 113.60911 * 25.43234 * 8 3 2 30 30 H 1.08995 * 113.62222 * 156.33371 * 8 3 2 31 31 H 1.09005 * 109.47275 * 207.47088 * 11 9 8 32 32 H 1.09000 * 109.47096 * 327.47540 * 11 9 8 33 33 H 1.07998 * 126.45684 * 0.03713 * 16 15 13 34 34 H 1.09001 * 109.46859 * 90.02398 * 20 19 17 35 35 H 0.96698 * 114.00381 * 179.97438 * 21 20 19 36 36 H 1.48499 * 110.00098 * 178.67554 * 22 20 19 37 37 H 1.48502 * 109.99733 * 300.00066 * 22 20 19 38 38 H 1.08992 * 109.47157 * 270.02513 * 24 23 19 39 39 H 1.08997 * 109.47209 * 30.02808 * 24 23 19 40 40 H 1.09004 * 109.47114 * 150.02375 * 24 23 19 41 41 H 1.09001 * 113.61654 * 203.66565 * 25 3 2 42 42 H 1.09006 * 113.61563 * 334.48273 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7156 2.0870 -1.2819 5 9 0.3430 2.3438 -1.3664 6 9 2.4162 3.2978 -1.2613 7 9 2.1183 1.3341 -2.3901 8 6 3.4945 1.3189 0.4023 9 6 3.0146 1.4744 1.8579 10 1 3.6169 2.1682 2.4445 11 6 2.7773 0.1425 2.5726 12 8 4.0176 -0.3100 3.1771 13 6 3.9801 -1.4784 3.8502 14 8 2.9385 -2.1013 3.9296 15 6 5.1939 -1.9969 4.4854 16 6 5.3003 -3.1683 5.2069 17 6 6.6301 -3.2732 5.6262 18 35 7.3661 -4.6808 6.6523 19 6 7.2968 -2.1844 5.1710 20 6 8.7572 -1.8919 5.4001 21 8 8.9608 -0.4778 5.4300 22 14 9.2913 -2.6308 7.0247 23 7 6.4354 -1.4013 4.4764 24 6 6.7695 -0.1322 3.8252 25 6 1.7333 2.1030 1.2853 26 1 -0.3633 0.4116 -0.9416 27 1 -0.3633 0.6098 0.8272 28 1 -0.3633 -1.0212 0.1145 29 1 4.0079 0.3771 0.2086 30 1 4.0406 2.1846 0.0277 31 1 2.0226 0.2755 3.3478 32 1 2.4320 -0.5996 1.8528 33 1 4.5066 -3.8726 5.4079 34 1 9.3459 -2.3266 4.5922 35 1 9.8804 -0.2158 5.5745 36 1 10.7373 -2.3768 7.2474 37 1 8.4960 -2.0462 8.1343 38 1 6.6162 0.6876 4.5268 39 1 7.8125 -0.1496 3.5090 40 1 6.1284 0.0095 2.9551 41 1 1.7987 3.1828 1.1517 42 1 0.8250 1.7949 1.8032 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_1458_4999870_17321610.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:01:43 Heat of formation + Delta-G solvation = -222.987501 kcal Electronic energy + Delta-G solvation = -34493.325097 eV Core-core repulsion = 29074.145029 eV Total energy + Delta-G solvation = -5419.180068 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.032 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -51.22272 -48.77644 -48.65094 -42.89636 -41.77270 -40.76705 -38.05471 -37.75485 -36.96488 -34.72413 -32.53303 -31.52285 -30.73453 -28.45605 -27.90867 -27.40601 -27.00135 -26.68569 -23.84654 -23.23763 -21.54995 -20.96320 -20.65076 -19.80883 -19.51354 -19.28718 -18.91117 -18.66056 -17.92854 -17.71006 -17.39677 -16.95050 -16.75111 -16.58645 -15.92466 -15.79734 -15.63451 -15.55155 -15.40981 -15.15201 -14.95741 -14.86826 -14.80865 -14.70924 -14.56117 -14.33908 -14.27626 -14.03928 -13.96980 -13.78808 -13.52585 -13.32340 -13.21308 -12.94238 -12.81880 -12.69539 -12.48747 -12.21995 -12.01021 -11.87248 -11.74142 -11.69148 -11.46426 -10.90098 -10.86860 -9.89272 -9.38129 -4.60033 -0.00198 0.33137 0.87590 1.20671 1.37855 1.49561 1.56602 1.77628 1.93537 1.95391 2.07437 2.47919 2.55935 2.75046 2.79541 3.07683 3.21936 3.33878 3.38500 3.50910 3.67693 3.75198 4.02294 4.06507 4.07755 4.10968 4.16395 4.20984 4.25647 4.26151 4.32273 4.40801 4.48179 4.50024 4.55282 4.59409 4.62045 4.64006 4.81889 5.20322 5.24451 5.54722 5.57061 5.75065 6.17455 6.64312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.007 3.993 2 O -0.333 6.333 3 C 0.039 3.961 4 C 0.438 3.562 5 F -0.181 7.181 6 F -0.175 7.175 7 F -0.174 7.174 8 C -0.112 4.112 9 C -0.100 4.100 10 H 0.107 0.893 11 C 0.079 3.921 12 O -0.357 6.357 13 C 0.543 3.457 14 O -0.489 6.489 15 C -0.036 4.036 16 C -0.056 4.056 17 C -0.192 4.192 18 Br 0.081 6.919 19 C 0.124 3.876 20 C -0.046 4.046 21 O -0.545 6.545 22 Si 0.574 3.426 23 N -0.388 5.388 24 C 0.073 3.927 25 C -0.144 4.144 26 H 0.058 0.942 27 H 0.055 0.945 28 H 0.102 0.898 29 H 0.099 0.901 30 H 0.116 0.884 31 H 0.078 0.922 32 H 0.095 0.905 33 H 0.168 0.832 34 H 0.091 0.909 35 H 0.388 0.612 36 H -0.235 1.235 37 H -0.243 1.243 38 H 0.084 0.916 39 H 0.097 0.903 40 H 0.098 0.902 41 H 0.115 0.885 42 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.281 1.027 0.043 2.502 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 O -0.250 6.250 3 C -0.004 4.004 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.157 7.157 7 F -0.155 7.155 8 C -0.149 4.149 9 C -0.118 4.118 10 H 0.125 0.875 11 C 0.006 3.994 12 O -0.274 6.274 13 C 0.388 3.612 14 O -0.376 6.376 15 C -0.146 4.146 16 C -0.083 4.083 17 C -0.277 4.277 18 Br 0.164 6.836 19 C 0.000 4.000 20 C -0.156 4.156 21 O -0.353 6.353 22 Si 0.471 3.529 23 N -0.062 5.062 24 C -0.067 4.067 25 C -0.181 4.181 26 H 0.077 0.923 27 H 0.074 0.926 28 H 0.121 0.879 29 H 0.117 0.883 30 H 0.134 0.866 31 H 0.096 0.904 32 H 0.113 0.887 33 H 0.186 0.814 34 H 0.109 0.891 35 H 0.238 0.762 36 H -0.158 1.158 37 H -0.166 1.166 38 H 0.103 0.897 39 H 0.116 0.884 40 H 0.117 0.883 41 H 0.133 0.867 42 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 2.007 0.731 0.868 2.305 hybrid contribution -0.071 1.816 -0.983 2.066 sum 1.935 2.547 -0.115 3.201 Atomic orbital electron populations 1.23234 0.79241 1.04468 1.01894 1.88092 1.21400 1.21703 1.93837 1.24007 0.99870 0.86441 0.90047 1.21201 0.74361 0.78720 0.87419 1.93179 1.31859 1.94399 1.96813 1.93185 1.78919 1.46883 1.96692 1.93223 1.90282 1.75817 1.56176 1.23297 0.90957 1.05665 0.94967 1.22161 0.97784 0.96344 0.95534 0.87466 1.23044 0.83539 0.95526 0.97325 1.86527 1.38946 1.37875 1.64090 1.19488 0.86894 0.78910 0.75951 1.90950 1.30716 1.58209 1.57756 1.19343 0.84354 0.98279 1.12617 1.21124 0.95090 0.95470 0.96593 1.20425 0.96151 0.98130 1.13000 1.96313 1.76940 1.41295 1.69028 1.19748 0.91626 0.91463 0.97155 1.24335 0.91829 0.86902 1.12530 1.86457 1.33615 1.19778 1.95411 0.93272 0.82527 1.00923 0.76223 1.44003 1.06704 1.17976 1.37493 1.22421 1.03759 0.81890 0.98672 1.23615 0.99542 1.01287 0.93691 0.92321 0.92592 0.87942 0.88255 0.86599 0.90357 0.88697 0.81435 0.89135 0.76228 1.15834 1.16607 0.89747 0.88422 0.88309 0.86679 0.88559 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.19 101.05 1.03 1.02 16 2 O -0.33 -0.08 8.53 -35.23 -0.30 -0.38 16 3 C 0.04 -0.04 0.79 -89.81 -0.07 -0.11 16 4 C 0.44 0.28 2.62 37.16 0.10 0.38 16 5 F -0.18 -0.21 14.84 2.25 0.03 -0.17 16 6 F -0.18 -0.09 15.72 2.25 0.04 -0.05 16 7 F -0.17 -0.42 17.26 2.25 0.04 -0.38 16 8 C -0.11 0.25 6.94 -25.78 -0.18 0.07 16 9 C -0.10 0.27 4.21 -89.66 -0.38 -0.10 16 10 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 11 C 0.08 -0.05 5.07 37.16 0.19 0.14 16 12 O -0.36 -0.19 7.65 -41.02 -0.31 -0.51 16 13 C 0.54 1.46 7.92 34.05 0.27 1.72 16 14 O -0.49 -2.46 16.68 -19.36 -0.32 -2.78 16 15 C -0.04 -0.08 6.88 -82.00 -0.56 -0.64 16 16 C -0.06 -0.10 10.63 -39.08 -0.42 -0.51 16 17 C -0.19 -0.24 6.15 -39.95 -0.25 -0.48 16 18 Br 0.08 -0.03 28.24 -68.01 -1.92 -1.95 16 19 C 0.12 0.15 6.18 -81.91 -0.51 -0.35 16 20 C -0.05 0.02 2.87 36.01 0.10 0.13 16 21 O -0.54 0.53 10.35 -35.23 -0.36 0.17 16 22 Si 0.57 0.31 27.10 -169.99 -4.61 -4.30 16 23 N -0.39 -0.46 3.16 -115.61 -0.37 -0.83 16 24 C 0.07 -0.09 9.35 59.85 0.56 0.47 16 25 C -0.14 0.42 6.64 -25.92 -0.17 0.24 16 26 H 0.06 -0.05 6.29 -51.93 -0.33 -0.37 16 27 H 0.06 -0.14 6.55 -51.93 -0.34 -0.48 16 28 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 29 H 0.10 -0.17 8.11 -51.93 -0.42 -0.59 16 30 H 0.12 -0.39 7.31 -51.93 -0.38 -0.77 16 31 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.09 0.05 6.12 -51.93 -0.32 -0.27 16 33 H 0.17 0.09 8.06 -52.49 -0.42 -0.33 16 34 H 0.09 -0.22 7.96 -51.93 -0.41 -0.63 16 35 H 0.39 -1.79 8.74 45.56 0.40 -1.39 16 36 H -0.23 -0.41 7.11 56.52 0.40 -0.01 16 37 H -0.24 -1.01 7.11 56.52 0.40 -0.61 16 38 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 39 H 0.10 -0.20 6.80 -51.93 -0.35 -0.56 16 40 H 0.10 -0.19 6.15 -51.93 -0.32 -0.51 16 41 H 0.11 -0.44 7.68 -51.93 -0.40 -0.84 16 42 H 0.10 -0.33 6.66 -51.93 -0.35 -0.67 16 LS Contribution 369.17 15.07 5.56 5.56 Total: 0.00 -6.84 369.17 -7.34 -14.18 By element: Atomic # 1 Polarization: -6.00 SS G_CDS: -4.53 Total: -10.53 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -0.28 Total: 1.97 kcal Atomic # 7 Polarization: -0.46 SS G_CDS: -0.37 Total: -0.83 kcal Atomic # 8 Polarization: -2.20 SS G_CDS: -1.30 Total: -3.50 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.11 Total: -0.61 kcal Atomic # 14 Polarization: 0.31 SS G_CDS: -4.61 Total: -4.30 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -1.92 Total: -1.95 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -6.84 -7.34 -14.18 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4999870_17321610.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -208.809 kcal (2) G-P(sol) polarization free energy of solvation -6.843 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -215.652 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.335 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.178 kcal (6) G-S(sol) free energy of system = (1) + (5) -222.988 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds