Wall clock time and date at job start Sat Mar 6 2021 09:01:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42891 * 114.00141 * 2 1 4 4 C 1.53002 * 112.85435 * 294.60736 * 3 2 1 5 5 F 1.39903 * 109.47019 * 65.45579 * 4 3 2 6 6 F 1.39902 * 109.47525 * 185.45891 * 4 3 2 7 7 F 1.39898 * 109.46981 * 305.46106 * 4 3 2 8 8 C 1.53783 * 113.61762 * 163.41123 * 3 2 1 9 9 C 1.54049 * 86.98697 * 270.84268 * 8 3 2 10 10 H 1.09007 * 113.61776 * 220.02311 * 9 8 3 11 11 C 1.53001 * 113.69389 * 89.11938 * 9 8 3 12 12 O 1.45206 * 109.46602 * 87.47411 * 11 9 8 13 13 C 1.34893 * 116.99336 * 180.02562 * 12 11 9 14 14 O 1.21622 * 120.00468 * 359.97438 * 13 12 11 15 15 C 1.46488 * 119.99592 * 179.97438 * 13 12 11 16 16 C 1.37990 * 126.23692 * 179.68201 * 15 13 12 17 17 C 1.39821 * 107.08330 * 179.90309 * 16 15 13 18 18 Br 1.89104 * 126.06555 * 180.13491 * 17 16 15 19 19 C 1.35542 * 107.86940 * 0.36445 * 17 16 15 20 20 C 1.50700 * 125.56078 * 179.75048 * 19 17 16 21 21 O 1.42897 * 109.47380 * 210.01974 * 20 19 17 22 22 Si 1.86301 * 109.47502 * 330.02589 * 20 19 17 23 23 N 1.35558 * 108.87947 * 359.77435 * 19 17 16 24 24 C 1.46501 * 125.68080 * 179.97438 * 23 19 17 25 25 C 1.53780 * 113.61577 * 65.80601 * 3 2 1 26 26 H 1.08994 * 109.47281 * 66.39027 * 1 2 3 27 27 H 1.09002 * 109.46712 * 306.39602 * 1 2 3 28 28 H 1.08998 * 109.47162 * 186.39633 * 1 2 3 29 29 H 1.09005 * 113.60911 * 25.43234 * 8 3 2 30 30 H 1.08995 * 113.62222 * 156.33371 * 8 3 2 31 31 H 1.09005 * 109.47275 * 207.47088 * 11 9 8 32 32 H 1.09000 * 109.47096 * 327.47540 * 11 9 8 33 33 H 1.07998 * 126.45684 * 0.03713 * 16 15 13 34 34 H 1.09001 * 109.46859 * 90.02398 * 20 19 17 35 35 H 0.96698 * 114.00381 * 179.97438 * 21 20 19 36 36 H 1.48499 * 110.00098 * 178.67554 * 22 20 19 37 37 H 1.48502 * 109.99733 * 300.00066 * 22 20 19 38 38 H 1.08992 * 109.47157 * 270.02513 * 24 23 19 39 39 H 1.08997 * 109.47209 * 30.02808 * 24 23 19 40 40 H 1.09004 * 109.47114 * 150.02375 * 24 23 19 41 41 H 1.09001 * 113.61654 * 203.66565 * 25 3 2 42 42 H 1.09006 * 113.61563 * 334.48273 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7156 2.0870 -1.2819 5 9 0.3430 2.3438 -1.3664 6 9 2.4162 3.2978 -1.2613 7 9 2.1183 1.3341 -2.3901 8 6 3.4945 1.3189 0.4023 9 6 3.0146 1.4744 1.8579 10 1 3.6169 2.1682 2.4445 11 6 2.7773 0.1425 2.5726 12 8 4.0176 -0.3100 3.1771 13 6 3.9801 -1.4784 3.8502 14 8 2.9385 -2.1013 3.9296 15 6 5.1939 -1.9969 4.4854 16 6 5.3003 -3.1683 5.2069 17 6 6.6301 -3.2732 5.6262 18 35 7.3661 -4.6808 6.6523 19 6 7.2968 -2.1844 5.1710 20 6 8.7572 -1.8919 5.4001 21 8 8.9608 -0.4778 5.4300 22 14 9.2913 -2.6308 7.0247 23 7 6.4354 -1.4013 4.4764 24 6 6.7695 -0.1322 3.8252 25 6 1.7333 2.1030 1.2853 26 1 -0.3633 0.4116 -0.9416 27 1 -0.3633 0.6098 0.8272 28 1 -0.3633 -1.0212 0.1145 29 1 4.0079 0.3771 0.2086 30 1 4.0406 2.1846 0.0277 31 1 2.0226 0.2755 3.3478 32 1 2.4320 -0.5996 1.8528 33 1 4.5066 -3.8726 5.4079 34 1 9.3459 -2.3266 4.5922 35 1 9.8804 -0.2158 5.5745 36 1 10.7373 -2.3768 7.2474 37 1 8.4960 -2.0462 8.1343 38 1 6.6162 0.6876 4.5268 39 1 7.8125 -0.1496 3.5090 40 1 6.1284 0.0095 2.9551 41 1 1.7987 3.1828 1.1517 42 1 0.8250 1.7949 1.8032 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_1458_4999870_17321610.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 09:01:42 Heat of formation + Delta-G solvation = -218.464628 kcal Electronic energy + Delta-G solvation = -34493.128970 eV Core-core repulsion = 29074.145029 eV Total energy + Delta-G solvation = -5418.983941 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.032 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -51.27627 -48.81535 -48.74556 -42.94913 -41.70042 -40.83138 -38.00402 -37.79005 -36.93604 -34.73514 -32.56720 -31.53676 -30.68407 -28.34801 -27.89554 -27.36347 -26.83827 -26.66613 -23.86541 -23.21737 -21.61963 -20.96856 -20.58820 -19.78975 -19.56909 -19.26197 -18.96627 -18.57365 -18.01778 -17.77209 -17.28251 -16.96168 -16.74275 -16.50497 -15.91987 -15.78534 -15.63532 -15.59722 -15.40646 -15.19342 -15.02252 -14.92901 -14.84482 -14.73846 -14.54452 -14.33387 -14.23178 -14.06654 -13.98619 -13.77236 -13.38002 -13.23312 -13.15613 -12.85334 -12.79067 -12.72192 -12.41854 -12.10695 -12.00815 -11.91442 -11.74519 -11.63247 -11.58565 -10.83006 -10.81279 -9.93110 -9.44092 -4.65958 -0.11503 0.29536 0.81290 1.16330 1.34258 1.47096 1.51408 1.74446 1.80761 1.99045 2.06850 2.54681 2.60708 2.85815 2.89814 3.20395 3.26530 3.38015 3.43703 3.57240 3.71919 3.78115 4.11825 4.20032 4.20677 4.23224 4.26998 4.35040 4.39036 4.41762 4.47617 4.49170 4.52355 4.61713 4.66695 4.75291 4.77385 4.80393 4.96349 5.14085 5.19386 5.49480 5.69044 5.74396 6.46585 6.50449 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.003 3.997 2 O -0.348 6.348 3 C 0.032 3.968 4 C 0.433 3.567 5 F -0.186 7.186 6 F -0.174 7.174 7 F -0.188 7.188 8 C -0.110 4.110 9 C -0.090 4.090 10 H 0.126 0.874 11 C 0.076 3.924 12 O -0.348 6.348 13 C 0.546 3.454 14 O -0.521 6.521 15 C -0.053 4.053 16 C -0.064 4.064 17 C -0.202 4.202 18 Br 0.094 6.906 19 C 0.117 3.883 20 C -0.037 4.037 21 O -0.553 6.553 22 Si 0.611 3.389 23 N -0.389 5.389 24 C 0.070 3.930 25 C -0.136 4.136 26 H 0.051 0.949 27 H 0.069 0.931 28 H 0.108 0.892 29 H 0.092 0.908 30 H 0.130 0.870 31 H 0.079 0.921 32 H 0.082 0.918 33 H 0.172 0.828 34 H 0.119 0.881 35 H 0.405 0.595 36 H -0.249 1.249 37 H -0.297 1.297 38 H 0.085 0.915 39 H 0.110 0.890 40 H 0.105 0.895 41 H 0.129 0.871 42 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.182 1.832 -0.136 3.674 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 O -0.266 6.266 3 C -0.011 4.011 4 C 0.379 3.621 5 F -0.167 7.167 6 F -0.156 7.156 7 F -0.170 7.170 8 C -0.147 4.147 9 C -0.108 4.108 10 H 0.144 0.856 11 C 0.003 3.997 12 O -0.265 6.265 13 C 0.392 3.608 14 O -0.410 6.410 15 C -0.163 4.163 16 C -0.091 4.091 17 C -0.287 4.287 18 Br 0.177 6.823 19 C -0.007 4.007 20 C -0.148 4.148 21 O -0.363 6.363 22 Si 0.513 3.487 23 N -0.062 5.062 24 C -0.069 4.069 25 C -0.174 4.174 26 H 0.069 0.931 27 H 0.087 0.913 28 H 0.126 0.874 29 H 0.110 0.890 30 H 0.148 0.852 31 H 0.097 0.903 32 H 0.100 0.900 33 H 0.189 0.811 34 H 0.137 0.863 35 H 0.257 0.743 36 H -0.173 1.173 37 H -0.223 1.223 38 H 0.104 0.896 39 H 0.128 0.872 40 H 0.123 0.877 41 H 0.147 0.853 42 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 2.940 1.547 0.673 3.389 hybrid contribution -0.342 1.596 -0.878 1.853 sum 2.598 3.142 -0.205 4.082 Atomic orbital electron populations 1.23324 0.78768 1.05126 1.02030 1.88077 1.22089 1.22611 1.93856 1.24241 1.00824 0.86193 0.89817 1.21543 0.74090 0.78827 0.87651 1.93166 1.32289 1.94445 1.96849 1.93180 1.78854 1.46846 1.96690 1.93189 1.90418 1.76217 1.57140 1.23380 0.90228 1.05951 0.95152 1.22086 0.98177 0.95392 0.95180 0.85644 1.23153 0.83166 0.96243 0.97108 1.86530 1.39496 1.36881 1.63580 1.19600 0.86623 0.79036 0.75568 1.90928 1.31801 1.59183 1.59113 1.19380 0.84757 0.98828 1.13332 1.21307 0.95590 0.95616 0.96546 1.20577 0.96100 0.98745 1.13243 1.96310 1.76565 1.40649 1.68730 1.20083 0.92444 0.91381 0.96836 1.24207 0.91053 0.87311 1.12213 1.86426 1.35358 1.19230 1.95310 0.92854 0.80247 1.00582 0.75004 1.44170 1.06212 1.18452 1.37335 1.22575 1.04647 0.80927 0.98750 1.23670 0.99722 1.01793 0.92171 0.93073 0.91263 0.87404 0.88951 0.85199 0.90310 0.90013 0.81056 0.86312 0.74302 1.17309 1.22319 0.89610 0.87209 0.87672 0.85263 0.87948 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.19 113.37 1.16 1.15 16 2 O -0.35 -0.37 8.53 -148.98 -1.27 -1.64 16 3 C 0.03 -0.06 0.79 -10.27 -0.01 -0.07 16 4 C 0.43 0.63 2.62 71.98 0.19 0.82 16 5 F -0.19 -0.49 14.84 44.97 0.67 0.18 16 6 F -0.17 -0.10 15.72 44.97 0.71 0.61 16 7 F -0.19 -1.06 17.26 44.97 0.78 -0.29 16 8 C -0.11 0.56 6.94 31.21 0.22 0.78 16 9 C -0.09 0.58 4.21 -10.17 -0.04 0.54 16 10 H 0.13 -1.21 8.14 -2.38 -0.02 -1.23 16 11 C 0.08 -0.10 5.07 71.98 0.37 0.27 16 12 O -0.35 -0.40 7.65 -58.07 -0.44 -0.84 16 13 C 0.55 3.36 7.92 69.97 0.55 3.91 16 14 O -0.52 -5.95 16.68 19.44 0.32 -5.63 16 15 C -0.05 -0.26 6.88 40.31 0.28 0.02 16 16 C -0.06 -0.27 10.63 22.59 0.24 -0.03 16 17 C -0.20 -0.54 6.15 22.03 0.14 -0.41 16 18 Br 0.09 -0.05 28.24 -20.37 -0.58 -0.63 16 19 C 0.12 0.24 6.18 41.36 0.26 0.50 16 20 C -0.04 0.08 2.87 71.24 0.20 0.28 16 21 O -0.55 1.84 10.35 -148.98 -1.54 0.30 16 22 Si 0.61 0.77 27.10 68.60 1.86 2.63 16 23 N -0.39 -0.81 3.16 -519.67 -1.64 -2.45 16 24 C 0.07 -0.24 9.35 127.77 1.19 0.96 16 25 C -0.14 0.92 6.64 31.12 0.21 1.13 16 26 H 0.05 -0.03 6.29 -2.39 -0.02 -0.05 16 27 H 0.07 -0.36 6.55 -2.39 -0.02 -0.37 16 28 H 0.11 -0.40 8.14 -2.39 -0.02 -0.42 16 29 H 0.09 -0.32 8.11 -2.38 -0.02 -0.34 16 30 H 0.13 -1.04 7.31 -2.39 -0.02 -1.05 16 31 H 0.08 -0.10 8.14 -2.38 -0.02 -0.12 16 32 H 0.08 0.15 6.12 -2.39 -0.01 0.14 16 33 H 0.17 0.41 8.06 -2.91 -0.02 0.39 16 34 H 0.12 -0.86 7.96 -2.39 -0.02 -0.88 16 35 H 0.40 -4.39 8.74 -74.06 -0.65 -5.03 16 36 H -0.25 -0.85 7.11 99.48 0.71 -0.14 16 37 H -0.30 -3.06 7.11 99.48 0.71 -2.35 16 38 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 39 H 0.11 -0.64 6.80 -2.39 -0.02 -0.65 16 40 H 0.10 -0.51 6.15 -2.39 -0.01 -0.53 16 41 H 0.13 -1.20 7.68 -2.39 -0.02 -1.22 16 42 H 0.10 -0.80 6.66 -2.38 -0.02 -0.81 16 Total: 0.00 -17.22 369.17 4.30 -12.91 By element: Atomic # 1 Polarization: -15.49 SS G_CDS: 0.50 Total: -14.99 kcal Atomic # 6 Polarization: 4.89 SS G_CDS: 4.94 Total: 9.83 kcal Atomic # 7 Polarization: -0.81 SS G_CDS: -1.64 Total: -2.45 kcal Atomic # 8 Polarization: -4.87 SS G_CDS: -2.93 Total: -7.81 kcal Atomic # 9 Polarization: -1.65 SS G_CDS: 2.15 Total: 0.50 kcal Atomic # 14 Polarization: 0.77 SS G_CDS: 1.86 Total: 2.63 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -0.58 Total: -0.63 kcal Total: -17.22 4.30 -12.91 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_1458_4999870_17321610.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -205.550 kcal (2) G-P(sol) polarization free energy of solvation -17.215 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -222.765 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.300 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.915 kcal (6) G-S(sol) free energy of system = (1) + (5) -218.465 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds